RNA–Protein interactions for RNA: ENST00000474916.1

CDK11A-214, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 3

Gene CDK11A, Length 752 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-214ENST00000474916 NISCHQ9Y2I1 1504 aa40.98■■■■■ 4.15
CDK11A-214ENST00000474916 CCDC180Q9P1Z9 1646 aa36.63■■■■□ 3.45
CDK11A-214ENST00000474916 ABCC9O60706 1549 aa36.39■■■■□ 3.42
CDK11A-214ENST00000474916 RB1CC1Q8TDY2 1594 aa34.69■■■■□ 3.14
CDK11A-214ENST00000474916 NACADO15069 1562 aa34.51■■■■□ 3.12
CDK11A-214ENST00000474916 DCAF8L2P0C7V8 631 aa34.42■■■■□ 3.1
CDK11A-214ENST00000474916 DNAJC5BQ9UF47 199 aa34.42■■■■□ 3.1
CDK11A-214ENST00000474916 UNC13AQ9UPW8 1703 aa34.1■■■■□ 3.05
CDK11A-214ENST00000474916 MYO15BQ96JP2 1530 aa34.09■■■■□ 3.05
CDK11A-214ENST00000474916 ZCCHC6Q5VYS8 1495 aaKnown RBP34.04■■■■□ 3.04
CDK11A-214ENST00000474916 PABPN1Q86U42 306 aaKnown RBP eCLIP33.92■■■■□ 3.02
CDK11A-214ENST00000474916 DCAF1Q9Y4B6 1507 aa33.8■■■■□ 3
CDK11A-214ENST00000474916 BICRAQ9NZM4 1560 aa33.79■■■■□ 3
CDK11A-214ENST00000474916 SCRIBQ14160 1630 aa33.48■■■□□ 2.95
CDK11A-214ENST00000474916 SHROOM4Q9ULL8 1493 aa33.15■■■□□ 2.9
CDK11A-214ENST00000474916 CC2D2AQ9P2K1 1620 aa32.89■■■□□ 2.86
CDK11A-214ENST00000474916 EIF4G1Q04637 1599 aaKnown RBP32.87■■■□□ 2.85
CDK11A-214ENST00000474916 CECR2Q9BXF3 1484 aa32.69■■■□□ 2.82
CDK11A-214ENST00000474916 DNAJC5Q9H3Z4 198 aa31.94■■■□□ 2.7
CDK11A-214ENST00000474916 SMARCA4P51532 1647 aa31.93■■■□□ 2.7
CDK11A-214ENST00000474916 NCAPD3P42695 1498 aa31.86■■■□□ 2.69
CDK11A-214ENST00000474916 ATAD2BQ9ULI0 1458 aa31.85■■■□□ 2.69
CDK11A-214ENST00000474916 BAZ1AQ9NRL2 1556 aaPredicted RBP31.75■■■□□ 2.67
CDK11A-214ENST00000474916 SMARCA2P51531 1590 aa31.73■■■□□ 2.67
CDK11A-214ENST00000474916 HMGXB3Q12766 1538 aa31.67■■■□□ 2.66
CDK11A-214ENST00000474916 MROH2BQ7Z745 1585 aa31.64■■■□□ 2.66
CDK11A-214ENST00000474916 PEG3Q9GZU2 1588 aa31.58■■■□□ 2.65
CDK11A-214ENST00000474916 BAZ1BQ9UIG0 1483 aaKnown RBP31.53■■■□□ 2.64
CDK11A-214ENST00000474916 NESP48681 1621 aa31.39■■■□□ 2.62
CDK11A-214ENST00000474916 WIZO95785 1651 aa31.32■■■□□ 2.6
CDK11A-214ENST00000474916 CUX2O14529 1486 aa31.31■■■□□ 2.6
CDK11A-214ENST00000474916 ERCC6Q03468 1493 aa31.31■■■□□ 2.6
CDK11A-214ENST00000474916 LAMC3Q9Y6N6 1575 aa31.11■■■□□ 2.57
CDK11A-214ENST00000474916 RSF1Q96T23 1441 aaPredicted RBP31.05■■■□□ 2.56
CDK11A-214ENST00000474916 KIF21AQ7Z4S6 1674 aa31.02■■■□□ 2.56
CDK11A-214ENST00000474916 THOC2Q8NI27 1593 aaKnown RBP31■■■□□ 2.55
CDK11A-214ENST00000474916 CADPSQ9ULU8 1353 aa30.91■■■□□ 2.54
CDK11A-214ENST00000474916 PDS5BQ9NTI5 1447 aa30.86■■■□□ 2.53
CDK11A-214ENST00000474916 TOP2AP11388 1531 aaKnown RBP30.85■■■□□ 2.53
CDK11A-214ENST00000474916 CFTRP13569 1480 aa30.64■■■□□ 2.5
CDK11A-214ENST00000474916 MRC2Q9UBG0 1479 aa30.64■■■□□ 2.5
CDK11A-214ENST00000474916 WDR62O43379 1518 aa30.59■■■□□ 2.49
CDK11A-214ENST00000474916 FANCD2Q9BXW9 1451 aa30.59■■■□□ 2.49
CDK11A-214ENST00000474916 CEP164Q9UPV0 1460 aa30.57■■■□□ 2.48
CDK11A-214ENST00000474916 CCDC88BA6NC98 1476 aa30.51■■■□□ 2.48
CDK11A-214ENST00000474916 PRDM2Q13029 1718 aa30.44■■■□□ 2.46
CDK11A-214ENST00000474916 URB2Q14146 1524 aaKnown RBP30.37■■■□□ 2.45
CDK11A-214ENST00000474916 TRIM41Q8WV44 630 aa30.37■■■□□ 2.45
CDK11A-214ENST00000474916 TOPBP1Q92547 1522 aa30.06■■■□□ 2.4
CDK11A-214ENST00000474916 DNMBPQ6XZF7 1577 aa29.97■■■□□ 2.39
CDK11A-214ENST00000474916 ZNF608Q9ULD9 1512 aaPredicted RBP29.96■■■□□ 2.39
CDK11A-214ENST00000474916 IFT140Q96RY7 1462 aa29.93■■■□□ 2.38
CDK11A-214ENST00000474916 SUPT5HO00267 1087 aaKnown RBP29.89■■■□□ 2.38
CDK11A-214ENST00000474916 ABCC8Q09428 1581 aa29.89■■■□□ 2.38
CDK11A-214ENST00000474916 TARBP1Q13395 1621 aaKnown RBP29.82■■■□□ 2.36
CDK11A-214ENST00000474916 EIF4G3O43432 1585 aaKnown RBP29.81■■■□□ 2.36
CDK11A-214ENST00000474916 POLA1P09884 1462 aaPredicted RBP29.78■■■□□ 2.36
CDK11A-214ENST00000474916 OSCARQ8IYS5 282 aa29.72■■■□□ 2.35
CDK11A-214ENST00000474916 RAD54L2Q9Y4B4 1467 aa29.71■■■□□ 2.35
CDK11A-214ENST00000474916 CUX1P39880 1505 aa29.71■■■□□ 2.35
CDK11A-214ENST00000474916 AQRO60306 1485 aaKnown RBP eCLIP29.7■■■□□ 2.359e-10■■□□□ 13
CDK11A-214ENST00000474916 FGD5Q6ZNL6 1462 aa29.65■■■□□ 2.34
CDK11A-214ENST00000474916 RIMBP3CA6NJZ7 1639 aa29.61■■■□□ 2.33
CDK11A-214ENST00000474916 RIMBP3BA6NNM3 1639 aa29.61■■■□□ 2.33
CDK11A-214ENST00000474916 RIMBP3Q9UFD9 1639 aa29.61■■■□□ 2.33
CDK11A-214ENST00000474916 SOGA1O94964 1423 aa29.61■■■□□ 2.33
CDK11A-214ENST00000474916 CHD1O14646 1710 aa29.57■■■□□ 2.32
CDK11A-214ENST00000474916 TDRD9Q8NDG6 1382 aaKnown RBP29.54■■■□□ 2.32
CDK11A-214ENST00000474916 WDR97A6NE52 1622 aa29.49■■■□□ 2.31
CDK11A-214ENST00000474916 SNAPC4Q5SXM2 1469 aa29.41■■■□□ 2.3
CDK11A-214ENST00000474916 ARHGEF11O15085 1522 aa29.4■■■□□ 2.3
CDK11A-214ENST00000474916 FBLN2P98095 1184 aa29.37■■■□□ 2.29
CDK11A-214ENST00000474916 PBRM1Q86U86 1689 aa29.33■■■□□ 2.29
CDK11A-214ENST00000474916 SYNJ1O43426 1573 aa29.31■■■□□ 2.28
CDK11A-214ENST00000474916 GRIN2BQ13224 1484 aa29.3■■■□□ 2.28
CDK11A-214ENST00000474916 BIVM-ERCC5R4GMW8 1640 aa29.3■■■□□ 2.28
CDK11A-214ENST00000474916 ABCA10Q8WWZ4 1543 aa29.3■■■□□ 2.28
CDK11A-214ENST00000474916 ABCA5Q8WWZ7 1642 aa29.28■■■□□ 2.28
CDK11A-214ENST00000474916 GAPVD1Q14C86 1478 aa29.27■■■□□ 2.28
CDK11A-214ENST00000474916 TOP2BQ02880 1626 aa29.27■■■□□ 2.28
CDK11A-214ENST00000474916 MAGI1Q96QZ7 1491 aaPredicted RBP29.26■■■□□ 2.27
CDK11A-214ENST00000474916 WRNQ14191 1432 aaPredicted RBP eCLIP29.24■■■□□ 2.27
CDK11A-214ENST00000474916 CLASP1Q7Z460 1538 aa29.18■■■□□ 2.26
CDK11A-214ENST00000474916 SYNJ2O15056 1496 aa29.17■■■□□ 2.26
CDK11A-214ENST00000474916 CHMP7Q8WUX9 453 aaPredicted RBP29.17■■■□□ 2.26
CDK11A-214ENST00000474916 ARAP1Q96P48 1450 aa29.11■■■□□ 2.25
CDK11A-214ENST00000474916 CYB5RLQ6IPT4 315 aa29.08■■■□□ 2.25
CDK11A-214ENST00000474916 ADAMTS12P58397 1594 aa29.04■■■□□ 2.24
CDK11A-214ENST00000474916 GRIN2AQ12879 1464 aa28.97■■■□□ 2.23
CDK11A-214ENST00000474916 TRHP20396 242 aaPredicted RBP28.94■■■□□ 2.22
CDK11A-214ENST00000474916 CEP170Q5SW79 1584 aa28.92■■■□□ 2.22
CDK11A-214ENST00000474916 ERICH3Q5RHP9 1530 aa28.9■■■□□ 2.22
CDK11A-214ENST00000474916 FHAD1B1AJZ9 1412 aa28.87■■■□□ 2.21
CDK11A-214ENST00000474916 NUP160Q12769 1436 aa28.85■■■□□ 2.21
CDK11A-214ENST00000474916 ERCC6L2Q5T890 1561 aa28.84■■■□□ 2.21
CDK11A-214ENST00000474916 SHROOM2Q13796 1616 aa28.73■■■□□ 2.19
CDK11A-214ENST00000474916 KIF27Q86VH2 1401 aa28.63■■■□□ 2.17
CDK11A-214ENST00000474916 RUSC2Q8N2Y8 1516 aa28.63■■■□□ 2.17
CDK11A-214ENST00000474916 IGF1RP08069 1367 aa28.62■■■□□ 2.17
CDK11A-214ENST00000474916 CUL7Q14999 1698 aa28.57■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 127.3 ms