RNA–Protein interactions for RNA: ENST00000474888.1

SNRPCP3-201, Transcript of small nuclear ribonucleoprotein polypeptide C pseudogene 3, humanhuman

BASIC

Gene SNRPCP3, Length 476 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPCP3-201ENST00000474888 HNRNPUL2Q1KMD3 747 aaKnown RBP7.58□□□□□ -1.2
SNRPCP3-201ENST00000474888 ISY1Q9ULR0 285 aaKnown RBP7.58□□□□□ -1.2
SNRPCP3-201ENST00000474888 ESPNB1AK53 854 aa7.57□□□□□ -1.2
SNRPCP3-201ENST00000474888 ZHX1Q9UKY1 873 aaPredicted RBP7.57□□□□□ -1.2
SNRPCP3-201ENST00000474888 CEP162Q5TB80 1403 aa7.57□□□□□ -1.2
SNRPCP3-201ENST00000474888 RNF123Q5XPI4 1314 aa7.56□□□□□ -1.2
SNRPCP3-201ENST00000474888 PLCD3Q8N3E9 789 aa7.56□□□□□ -1.2
SNRPCP3-201ENST00000474888 FSD2A1L4K1 749 aa7.55□□□□□ -1.2
SNRPCP3-201ENST00000474888 HMGB1P09429 215 aaKnown RBP7.55□□□□□ -1.2
SNRPCP3-201ENST00000474888 DNTTIP2Q5QJE6 756 aaKnown RBP7.55□□□□□ -1.2
SNRPCP3-201ENST00000474888 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.55□□□□□ -1.2
SNRPCP3-201ENST00000474888 DNAJC2Q99543 621 aaKnown RBP7.55□□□□□ -1.2
SNRPCP3-201ENST00000474888 TNIKQ9UKE5 1360 aa7.55□□□□□ -1.2
SNRPCP3-201ENST00000474888 OFD1O75665 1012 aa7.54□□□□□ -1.2
SNRPCP3-201ENST00000474888 GRIPAP1Q4V328 841 aa7.54□□□□□ -1.2
SNRPCP3-201ENST00000474888 KIAA1211Q6ZU35 1233 aa7.54□□□□□ -1.2
SNRPCP3-201ENST00000474888 TICAM2Q86XR7 235 aa7.54□□□□□ -1.2
SNRPCP3-201ENST00000474888 YY1AP1Q9H869 796 aa7.54□□□□□ -1.2
SNRPCP3-201ENST00000474888 FRAT2O75474 233 aaPredicted RBP7.53□□□□□ -1.2
SNRPCP3-201ENST00000474888 XRCC6P12956 609 aaKnown RBP eCLIP7.53□□□□□ -1.2
SNRPCP3-201ENST00000474888 ZSCAN20P17040 1043 aaPredicted RBP7.53□□□□□ -1.2
SNRPCP3-201ENST00000474888 MCCP23508 829 aa7.53□□□□□ -1.2
SNRPCP3-201ENST00000474888 MRE11P49959 708 aa7.53□□□□□ -1.2
SNRPCP3-201ENST00000474888 FOXD1Q16676 465 aa7.53□□□□□ -1.2
SNRPCP3-201ENST00000474888 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.53□□□□□ -1.2
SNRPCP3-201ENST00000474888 CCDC94Q9BW85 323 aaPredicted RBP7.53□□□□□ -1.2
SNRPCP3-201ENST00000474888 TAOK2Q9UL54 1235 aa7.53□□□□□ -1.2
SNRPCP3-201ENST00000474888 ZBED9Q6R2W3 1325 aa7.52□□□□□ -1.2
SNRPCP3-201ENST00000474888 DYNC1I1O14576 645 aa7.52□□□□□ -1.21
SNRPCP3-201ENST00000474888 CNPY4Q8N129 248 aa7.52□□□□□ -1.21
SNRPCP3-201ENST00000474888 HDAC5Q9UQL6 1122 aa7.52□□□□□ -1.21
SNRPCP3-201ENST00000474888 RIPK4P57078 832 aa7.51□□□□□ -1.21
SNRPCP3-201ENST00000474888 FAM193AP78312 1265 aa7.51□□□□□ -1.21
SNRPCP3-201ENST00000474888 WWC1Q8IX03 1113 aa7.51□□□□□ -1.21
SNRPCP3-201ENST00000474888 CCDC9Q9Y3X0 531 aaKnown RBP7.51□□□□□ -1.21
SNRPCP3-201ENST00000474888 SMG6Q86US8 1419 aaKnown RBP7.51□□□□□ -1.21
SNRPCP3-201ENST00000474888 VGLL3A8MV65 326 aa7.5□□□□□ -1.21
SNRPCP3-201ENST00000474888 PHF14O94880 888 aa7.5□□□□□ -1.21
SNRPCP3-201ENST00000474888 APPP05067 770 aa7.5□□□□□ -1.21
SNRPCP3-201ENST00000474888 MYH16Q9H6N6 1097 aa7.5□□□□□ -1.21
SNRPCP3-201ENST00000474888 PSEN1P49768 467 aa7.49□□□□□ -1.21
SNRPCP3-201ENST00000474888 CEP120Q8N960 986 aa7.49□□□□□ -1.21
SNRPCP3-201ENST00000474888 TSPYL1Q9H0U9 437 aa7.49□□□□□ -1.21
SNRPCP3-201ENST00000474888 KCNG1Q9UIX4 513 aa7.49□□□□□ -1.21
SNRPCP3-201ENST00000474888 PEG3Q9GZU2 1588 aa7.49□□□□□ -1.21
SNRPCP3-201ENST00000474888 GEMIN8Q9NWZ8 242 aaKnown RBP7.48□□□□□ -1.21
SNRPCP3-201ENST00000474888 FAM13BQ9NYF5 915 aa7.48□□□□□ -1.21
SNRPCP3-201ENST00000474888 PHLDB1Q86UU1 1377 aa7.47□□□□□ -1.21
SNRPCP3-201ENST00000474888 CLSTN1O94985 981 aa7.47□□□□□ -1.21
SNRPCP3-201ENST00000474888 POLR3GLQ9BT43 218 aa7.47□□□□□ -1.21
SNRPCP3-201ENST00000474888 POGKQ9P215 609 aa7.47□□□□□ -1.21
SNRPCP3-201ENST00000474888 CUX2O14529 1486 aa7.47□□□□□ -1.21
SNRPCP3-201ENST00000474888 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.46□□□□□ -1.22
SNRPCP3-201ENST00000474888 RALBP1Q15311 655 aa7.45□□□□□ -1.22
SNRPCP3-201ENST00000474888 CSPP1Q1MSJ5 1256 aa7.45□□□□□ -1.22
SNRPCP3-201ENST00000474888 PLCD4Q9BRC7 762 aa7.45□□□□□ -1.22
SNRPCP3-201ENST00000474888 SMARCA2P51531 1590 aa7.45□□□□□ -1.22
SNRPCP3-201ENST00000474888 BECN1Q14457 450 aa7.44□□□□□ -1.22
SNRPCP3-201ENST00000474888 HS1BP3Q53T59 392 aa7.44□□□□□ -1.22
SNRPCP3-201ENST00000474888 ZSCAN30Q86W11 494 aa7.44□□□□□ -1.22
SNRPCP3-201ENST00000474888 PRDM10Q9NQV6 1147 aa7.44□□□□□ -1.22
SNRPCP3-201ENST00000474888 NUDCQ9Y266 331 aa7.44□□□□□ -1.22
SNRPCP3-201ENST00000474888 PATL2C9JE40 543 aaKnown RBP7.43□□□□□ -1.22
SNRPCP3-201ENST00000474888 CC2D1BQ5T0F9 858 aaKnown RBP7.43□□□□□ -1.22
SNRPCP3-201ENST00000474888 EFCC1Q9HA90 598 aa7.43□□□□□ -1.22
SNRPCP3-201ENST00000474888 CCDC66A2RUB6 948 aa7.42□□□□□ -1.22
SNRPCP3-201ENST00000474888 IRX5P78411 483 aaPredicted RBP7.42□□□□□ -1.22
SNRPCP3-201ENST00000474888 CCDC173Q0VFZ6 552 aa7.42□□□□□ -1.22
SNRPCP3-201ENST00000474888 GRPEL1Q9HAV7 217 aa7.42□□□□□ -1.22
SNRPCP3-201ENST00000474888 UQCRHLA0A096LP55 91 aa7.41□□□□□ -1.22
SNRPCP3-201ENST00000474888 UQCRHP07919 91 aa7.41□□□□□ -1.22
SNRPCP3-201ENST00000474888 MSNP26038 577 aaKnown RBP7.41□□□□□ -1.22
SNRPCP3-201ENST00000474888 SETQ01105 290 aaPredicted RBP7.41□□□□□ -1.22
SNRPCP3-201ENST00000474888 SLC52A1Q9NWF4 448 aa7.41□□□□□ -1.22
SNRPCP3-201ENST00000474888 ERBB4Q15303 1308 aa7.41□□□□□ -1.22
SNRPCP3-201ENST00000474888 BAZ1BQ9UIG0 1483 aaKnown RBP7.41□□□□□ -1.22
SNRPCP3-201ENST00000474888 RB1CC1Q8TDY2 1594 aa7.41□□□□□ -1.22
SNRPCP3-201ENST00000474888 ZNF500O60304 480 aaPredicted RBP7.4□□□□□ -1.22
SNRPCP3-201ENST00000474888 MCM5P33992 734 aa7.4□□□□□ -1.22
SNRPCP3-201ENST00000474888 NBPF20Q3BBV1 942 aa7.4□□□□□ -1.22
SNRPCP3-201ENST00000474888 SASS6Q6UVJ0 657 aa7.4□□□□□ -1.22
SNRPCP3-201ENST00000474888 PPP1R9BQ96SB3 815 aa7.4□□□□□ -1.22
SNRPCP3-201ENST00000474888 SIN3AQ96ST3 1273 aa7.4□□□□□ -1.22
SNRPCP3-201ENST00000474888 CARD10Q9BWT7 1032 aa7.4□□□□□ -1.22
SNRPCP3-201ENST00000474888 CEP164Q9UPV0 1460 aa7.39□□□□□ -1.23
SNRPCP3-201ENST00000474888 SOX12O15370 315 aa7.39□□□□□ -1.23
SNRPCP3-201ENST00000474888 NBPF1Q3BBV0 1214 aa7.39□□□□□ -1.23
SNRPCP3-201ENST00000474888 PANK2Q9BZ23 570 aa7.39□□□□□ -1.23
SNRPCP3-201ENST00000474888 CGNQ9P2M7 1197 aaKnown RBP7.39□□□□□ -1.23
SNRPCP3-201ENST00000474888 R3HCC1Q9Y3T6 440 aaKnown RBP7.39□□□□□ -1.23
SNRPCP3-201ENST00000474888 KIF3AQ9Y496 699 aa7.39□□□□□ -1.23
SNRPCP3-201ENST00000474888 NINLQ9Y2I6 1382 aa7.38□□□□□ -1.23
SNRPCP3-201ENST00000474888 MYCNP04198 464 aaPredicted RBP7.38□□□□□ -1.23
SNRPCP3-201ENST00000474888 SLC4A3P48751 1232 aa7.38□□□□□ -1.23
SNRPCP3-201ENST00000474888 FAM161AQ3B820 660 aa7.38□□□□□ -1.23
SNRPCP3-201ENST00000474888 TPRNQ4KMQ1 711 aa7.38□□□□□ -1.23
SNRPCP3-201ENST00000474888 TIGD1Q96MW7 591 aa7.38□□□□□ -1.23
SNRPCP3-201ENST00000474888 WDR97A6NE52 1622 aa7.38□□□□□ -1.23
SNRPCP3-201ENST00000474888 E9PSI1 815 aa7.37□□□□□ -1.23
SNRPCP3-201ENST00000474888 TULP2O00295 520 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms