RNA–Protein interactions for RNA: ENST00000474807.5

DNMT3A-210, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 5

Gene DNMT3A, Length 840 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-210ENST00000474807 POGZQ7Z3K3 1410 aa29.83■■■□□ 2.37
DNMT3A-210ENST00000474807 MAGI2Q86UL8 1455 aa29.81■■■□□ 2.36
DNMT3A-210ENST00000474807 BCORL1Q5H9F3 1711 aa29.81■■■□□ 2.36
DNMT3A-210ENST00000474807 YEATS2Q9ULM3 1422 aa29.79■■■□□ 2.36
DNMT3A-210ENST00000474807 ARID4BQ4LE39 1312 aaPredicted RBP29.79■■■□□ 2.36
DNMT3A-210ENST00000474807 ZFYVE16Q7Z3T8 1539 aa29.79■■■□□ 2.36
DNMT3A-210ENST00000474807 ARHGAP5Q13017 1502 aa29.78■■■□□ 2.36
DNMT3A-210ENST00000474807 HECW2Q9P2P5 1572 aa29.76■■■□□ 2.35
DNMT3A-210ENST00000474807 CDC42BPBQ9Y5S2 1711 aa29.75■■■□□ 2.35
DNMT3A-210ENST00000474807 PTPRMP28827 1452 aa29.74■■■□□ 2.35
DNMT3A-210ENST00000474807 PREX2Q70Z35 1606 aa29.71■■■□□ 2.35
DNMT3A-210ENST00000474807 MADDQ8WXG6 1647 aa29.71■■■□□ 2.35
DNMT3A-210ENST00000474807 SIGLEC1Q9BZZ2 1709 aa29.71■■■□□ 2.35
DNMT3A-210ENST00000474807 ZNF518AQ6AHZ1 1483 aa29.69■■■□□ 2.34
DNMT3A-210ENST00000474807 KDM5CP41229 1560 aa29.66■■■□□ 2.34
DNMT3A-210ENST00000474807 AFAP1Q8N556 730 aa29.66■■■□□ 2.34
DNMT3A-210ENST00000474807 CEP162Q5TB80 1403 aa29.65■■■□□ 2.34
DNMT3A-210ENST00000474807 CDC42BPAQ5VT25 1732 aa29.65■■■□□ 2.34
DNMT3A-210ENST00000474807 ATP10AO60312 1499 aa29.64■■■□□ 2.34
DNMT3A-210ENST00000474807 ABCC1P33527 1531 aa29.61■■■□□ 2.33
DNMT3A-210ENST00000474807 C9orf84Q5VXU9 1444 aa29.61■■■□□ 2.33
DNMT3A-210ENST00000474807 ARHGEF12Q9NZN5 1544 aa29.61■■■□□ 2.33
DNMT3A-210ENST00000474807 RIMS1Q86UR5 1692 aaKnown RBP29.6■■■□□ 2.33
DNMT3A-210ENST00000474807 GPATCH8Q9UKJ3 1502 aaKnown RBP29.57■■■□□ 2.32
DNMT3A-210ENST00000474807 TRAPPC8Q9Y2L5 1435 aa29.57■■■□□ 2.32
DNMT3A-210ENST00000474807 ITSN2Q9NZM3 1697 aa29.56■■■□□ 2.32
DNMT3A-210ENST00000474807 MLH3Q9UHC1 1453 aa29.55■■■□□ 2.32
DNMT3A-210ENST00000474807 MLECQ14165 292 aa29.54■■■□□ 2.32
DNMT3A-210ENST00000474807 MTUS2Q5JR59 1369 aa29.52■■■□□ 2.32
DNMT3A-210ENST00000474807 DIP2CQ9Y2E4 1556 aa29.52■■■□□ 2.32
DNMT3A-210ENST00000474807 SAMD9LQ8IVG5 1584 aa29.51■■■□□ 2.31
DNMT3A-210ENST00000474807 MYT1LQ9UL68 1186 aa29.5■■■□□ 2.31
DNMT3A-210ENST00000474807 REREQ9P2R6 1566 aa29.49■■■□□ 2.31
DNMT3A-210ENST00000474807 LOC105371045A0A1W2PR82 267 aa29.49■■■□□ 2.31
DNMT3A-210ENST00000474807 FER1L4A9Z1Z3 1794 aa29.49■■■□□ 2.31
DNMT3A-210ENST00000474807 ABCA6Q8N139 1617 aa29.49■■■□□ 2.31
DNMT3A-210ENST00000474807 ZNF777Q9ULD5 760 aaPredicted RBP29.48■■■□□ 2.31
DNMT3A-210ENST00000474807 CCNB3Q8WWL7 1395 aa29.46■■■□□ 2.31
DNMT3A-210ENST00000474807 EHBP1L1Q8N3D4 1523 aa29.45■■■□□ 2.31
DNMT3A-210ENST00000474807 KIDINS220Q9ULH0 1771 aa29.44■■■□□ 2.3
DNMT3A-210ENST00000474807 LMTK3Q96Q04 1460 aa29.44■■■□□ 2.3
DNMT3A-210ENST00000474807 CFDP1Q9UEE9 299 aaPredicted RBP29.44■■■□□ 2.3
DNMT3A-210ENST00000474807 SYCP2Q9BX26 1530 aa29.44■■■□□ 2.3
DNMT3A-210ENST00000474807 KIAA1107Q9UPP5 1409 aa29.42■■■□□ 2.3
DNMT3A-210ENST00000474807 HNRNPMP52272 730 aaKnown RBP eCLIP29.41■■■□□ 2.3
DNMT3A-210ENST00000474807 PLPPR3Q6T4P5 718 aa29.4■■■□□ 2.3
DNMT3A-210ENST00000474807 TIAM1Q13009 1591 aa29.39■■■□□ 2.3
DNMT3A-210ENST00000474807 PLEKHH2Q8IVE3 1493 aa29.39■■■□□ 2.3
DNMT3A-210ENST00000474807 AGLP35573 1532 aa29.39■■■□□ 2.3
DNMT3A-210ENST00000474807 SPAG9O60271 1321 aaKnown RBP29.34■■■□□ 2.29
DNMT3A-210ENST00000474807 VPS8Q8N3P4 1428 aa29.34■■■□□ 2.29
DNMT3A-210ENST00000474807 ZNF644Q9H582 1327 aaPredicted RBP29.3■■■□□ 2.28
DNMT3A-210ENST00000474807 CEBPAP49715 358 aaPredicted RBP29.29■■■□□ 2.28
DNMT3A-210ENST00000474807 INO80Q9ULG1 1556 aaPredicted RBP29.29■■■□□ 2.28
DNMT3A-210ENST00000474807 ATP7AQ04656 1500 aa29.29■■■□□ 2.28
DNMT3A-210ENST00000474807 NCOA2Q15596 1464 aa29.29■■■□□ 2.28
DNMT3A-210ENST00000474807 SUPT6HQ7KZ85 1726 aaKnown RBP29.28■■■□□ 2.28
DNMT3A-210ENST00000474807 MBD5Q9P267 1494 aa29.27■■■□□ 2.28
DNMT3A-210ENST00000474807 HSPA2P54652 639 aa29.25■■■□□ 2.27
DNMT3A-210ENST00000474807 ILDR1Q86SU0 546 aaPredicted RBP29.23■■■□□ 2.27
DNMT3A-210ENST00000474807 LRRC9Q6ZRR7 1453 aa29.21■■■□□ 2.27
DNMT3A-210ENST00000474807 PLXNC1O60486 1568 aa29.21■■■□□ 2.27
DNMT3A-210ENST00000474807 PREX1Q8TCU6 1659 aa29.21■■■□□ 2.27
DNMT3A-210ENST00000474807 C3P01024 1663 aa29.19■■■□□ 2.26
DNMT3A-210ENST00000474807 A2MP01023 1474 aa29.19■■■□□ 2.26
DNMT3A-210ENST00000474807 ESF1Q9H501 851 aaKnown RBP29.18■■■□□ 2.26
DNMT3A-210ENST00000474807 MAP3K1Q13233 1512 aa29.18■■■□□ 2.26
DNMT3A-210ENST00000474807 CNTLNQ9NXG0 1405 aa29.16■■■□□ 2.26
DNMT3A-210ENST00000474807 RTEL1-TNFRSF6BF6WH68 1400 aa29.15■■■□□ 2.26
DNMT3A-210ENST00000474807 CAMSAP2Q08AD1 1489 aa29.15■■■□□ 2.26
DNMT3A-210ENST00000474807 SETD1BQ9UPS6 1966 aaKnown RBP29.14■■■□□ 2.26
DNMT3A-210ENST00000474807 ADGBQ8N7X0 1667 aa29.13■■■□□ 2.25
DNMT3A-210ENST00000474807 KANK4Q5T7N3 995 aaPredicted RBP29.13■■■□□ 2.25
DNMT3A-210ENST00000474807 CCDC141Q6ZP82 1450 aa29.11■■■□□ 2.25
DNMT3A-210ENST00000474807 UHRF1BP1Q6BDS2 1440 aa29.11■■■□□ 2.25
DNMT3A-210ENST00000474807 RSPH4AQ5TD94 716 aa29.1■■■□□ 2.25
DNMT3A-210ENST00000474807 MROH2AA6NES4 1674 aa29.09■■■□□ 2.25
DNMT3A-210ENST00000474807 ZMYM3Q14202 1370 aa29.05■■■□□ 2.24
DNMT3A-210ENST00000474807 DHX29Q7Z478 1369 aaKnown RBP29.05■■■□□ 2.24
DNMT3A-210ENST00000474807 ARHGEF5Q12774 1597 aa29.05■■■□□ 2.24
DNMT3A-210ENST00000474807 GGT6Q6P531 493 aa29.04■■■□□ 2.24
DNMT3A-210ENST00000474807 CLTCQ00610 1675 aaKnown RBP29.02■■■□□ 2.24
DNMT3A-210ENST00000474807 PPP6R1Q9UPN7 881 aa29.01■■■□□ 2.23
DNMT3A-210ENST00000474807 NPATQ14207 1427 aa29.01■■■□□ 2.23
DNMT3A-210ENST00000474807 STRCQ7RTU9 1775 aa28.98■■■□□ 2.23
DNMT3A-210ENST00000474807 MYOM3Q5VTT5 1437 aa28.98■■■□□ 2.23
DNMT3A-210ENST00000474807 MIA2Q96PC5 1412 aa28.98■■■□□ 2.23
DNMT3A-210ENST00000474807 TSPY4P0CV99 314 aa28.96■■■□□ 2.23
DNMT3A-210ENST00000474807 TSPY10P0CW01 314 aa28.96■■■□□ 2.23
DNMT3A-210ENST00000474807 FBXO41Q8TF61 875 aa28.93■■■□□ 2.22
DNMT3A-210ENST00000474807 KIF3BO15066 747 aa28.92■■■□□ 2.22
DNMT3A-210ENST00000474807 APLP2Q06481 763 aa28.92■■■□□ 2.22
DNMT3A-210ENST00000474807 PTPRKQ15262 1439 aa28.92■■■□□ 2.22
DNMT3A-210ENST00000474807 MAST1Q9Y2H9 1570 aa28.92■■■□□ 2.22
DNMT3A-210ENST00000474807 DMRT2Q9Y5R5 561 aa28.9■■■□□ 2.22
DNMT3A-210ENST00000474807 FAM135AQ9P2D6 1515 aa28.84■■■□□ 2.21
DNMT3A-210ENST00000474807 MYO3AQ8NEV4 1616 aa28.84■■■□□ 2.21
DNMT3A-210ENST00000474807 NCOA1Q15788 1441 aa28.84■■■□□ 2.21
DNMT3A-210ENST00000474807 KDM5DQ9BY66 1539 aa28.83■■■□□ 2.21
DNMT3A-210ENST00000474807 PTPRTO14522 1441 aa28.82■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms