RNA–Protein interactions for RNA: ENST00000474617.1

CCM2-206, Transcript of CCM2 scaffold protein, humanhuman

TSL 5 BASIC

Gene CCM2, Length 1,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-206ENST00000474617 ABCC5O15440 1437 aa31.62■■■□□ 2.65
CCM2-206ENST00000474617 UHRF1BP1LA0JNW5 1464 aa31.6■■■□□ 2.65
CCM2-206ENST00000474617 CDC42BPAQ5VT25 1732 aa31.55■■■□□ 2.64
CCM2-206ENST00000474617 ADGBQ8N7X0 1667 aa31.55■■■□□ 2.64
CCM2-206ENST00000474617 ADGRL2O95490 1459 aa31.55■■■□□ 2.64
CCM2-206ENST00000474617 SHANK2Q9UPX8 1470 aa31.53■■■□□ 2.64
CCM2-206ENST00000474617 CROCC2H7BZ55 1655 aa31.52■■■□□ 2.64
CCM2-206ENST00000474617 RRP7BPQ9NSQ0 103 aa31.48■■■□□ 2.63
CCM2-206ENST00000474617 CHIC2Q9UKJ5 165 aa31.45■■■□□ 2.63
CCM2-206ENST00000474617 ARHGEF5Q12774 1597 aa31.45■■■□□ 2.63
CCM2-206ENST00000474617 ERCC6L2Q5T890 1561 aa31.45■■■□□ 2.63
CCM2-206ENST00000474617 PREX2Q70Z35 1606 aa31.44■■■□□ 2.62
CCM2-206ENST00000474617 RSPH4AQ5TD94 716 aa31.43■■■□□ 2.62
CCM2-206ENST00000474617 ZNF644Q9H582 1327 aaPredicted RBP31.42■■■□□ 2.62
CCM2-206ENST00000474617 ANKRD30AQ9BXX3 1397 aa31.41■■■□□ 2.62
CCM2-206ENST00000474617 KDM5BQ9UGL1 1544 aa31.41■■■□□ 2.62
CCM2-206ENST00000474617 NCOA1Q15788 1441 aa31.41■■■□□ 2.62
CCM2-206ENST00000474617 PLEKHH2Q8IVE3 1493 aa31.36■■■□□ 2.61
CCM2-206ENST00000474617 TONSLQ96HA7 1378 aa31.35■■■□□ 2.61
CCM2-206ENST00000474617 KDM6BO15054 1643 aa31.34■■■□□ 2.61
CCM2-206ENST00000474617 SIN3AQ96ST3 1273 aa31.34■■■□□ 2.61
CCM2-206ENST00000474617 ZCCHC11Q5TAX3 1644 aaKnown RBP31.32■■■□□ 2.6
CCM2-206ENST00000474617 NEUROD1Q13562 356 aa31.31■■■□□ 2.6
CCM2-206ENST00000474617 TRIM52Q96A61 297 aa31.31■■■□□ 2.6
CCM2-206ENST00000474617 ZNF777Q9ULD5 760 aaPredicted RBP31.3■■■□□ 2.6
CCM2-206ENST00000474617 CDC42BPBQ9Y5S2 1711 aa31.3■■■□□ 2.6
CCM2-206ENST00000474617 C9orf84Q5VXU9 1444 aa31.29■■■□□ 2.6
CCM2-206ENST00000474617 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.29■■■□□ 2.6
CCM2-206ENST00000474617 PPP1R15AO75807 674 aaPredicted RBP31.29■■■□□ 2.6
CCM2-206ENST00000474617 MPHOSPH9Q99550 1183 aa31.29■■■□□ 2.6
CCM2-206ENST00000474617 MYO5CQ9NQX4 1742 aa31.28■■■□□ 2.6
CCM2-206ENST00000474617 CCDC141Q6ZP82 1450 aa31.28■■■□□ 2.6
CCM2-206ENST00000474617 TSPY4P0CV99 314 aa31.28■■■□□ 2.6
CCM2-206ENST00000474617 TSPY10P0CW01 314 aa31.28■■■□□ 2.6
CCM2-206ENST00000474617 KIAA1107Q9UPP5 1409 aa31.27■■■□□ 2.6
CCM2-206ENST00000474617 MBD5Q9P267 1494 aa31.26■■■□□ 2.6
CCM2-206ENST00000474617 SAMD9LQ8IVG5 1584 aa31.25■■■□□ 2.59
CCM2-206ENST00000474617 DENND4BO75064 1496 aaPredicted RBP31.24■■■□□ 2.59
CCM2-206ENST00000474617 TTC37Q6PGP7 1564 aa31.24■■■□□ 2.59
CCM2-206ENST00000474617 MAST1Q9Y2H9 1570 aa31.24■■■□□ 2.59
CCM2-206ENST00000474617 ARAP3Q8WWN8 1544 aa31.23■■■□□ 2.59
CCM2-206ENST00000474617 ARHGAP5Q13017 1502 aa31.21■■■□□ 2.59
CCM2-206ENST00000474617 ANKRD50Q9ULJ7 1429 aa31.21■■■□□ 2.59
CCM2-206ENST00000474617 PLCH2O75038 1416 aa31.17■■■□□ 2.58
CCM2-206ENST00000474617 OSCARQ8IYS5 282 aa31.16■■■□□ 2.58
CCM2-206ENST00000474617 KDM5DQ9BY66 1539 aa31.15■■■□□ 2.58
CCM2-206ENST00000474617 ANKRD30BQ9BXX2 1392 aa31.14■■■□□ 2.58
CCM2-206ENST00000474617 PZPP20742 1482 aa31.12■■■□□ 2.57
CCM2-206ENST00000474617 SLC4A1APQ9BWU0 796 aaKnown RBP31.1■■■□□ 2.57
CCM2-206ENST00000474617 RPRD2Q5VT52 1461 aaKnown RBP31.1■■■□□ 2.57
CCM2-206ENST00000474617 KIF15Q9NS87 1388 aa31.1■■■□□ 2.57
CCM2-206ENST00000474617 PLXNC1O60486 1568 aa31.09■■■□□ 2.57
CCM2-206ENST00000474617 WDR7Q9Y4E6 1490 aa31.08■■■□□ 2.57
CCM2-206ENST00000474617 SYCP2Q9BX26 1530 aa31.08■■■□□ 2.57
CCM2-206ENST00000474617 EFCAB2Q5VUJ9 269 aa31.07■■■□□ 2.56
CCM2-206ENST00000474617 HNRNPMP52272 730 aaKnown RBP eCLIP31.05■■■□□ 2.562e-6■■■□□ 15.7
CCM2-206ENST00000474617 ABCC1P33527 1531 aa31■■■□□ 2.55
CCM2-206ENST00000474617 ABCA9Q8IUA7 1624 aa30.98■■■□□ 2.55
CCM2-206ENST00000474617 KCNH8Q96L42 1107 aa30.97■■■□□ 2.55
CCM2-206ENST00000474617 DUOX2Q9NRD8 1548 aa30.95■■■□□ 2.54
CCM2-206ENST00000474617 CENPBP07199 599 aaPredicted RBP30.93■■■□□ 2.54
CCM2-206ENST00000474617 NUP155O75694 1391 aa30.93■■■□□ 2.54
CCM2-206ENST00000474617 MIER1Q8N108 512 aa30.93■■■□□ 2.54
CCM2-206ENST00000474617 RTEL1-TNFRSF6BF6WH68 1400 aa30.92■■■□□ 2.54
CCM2-206ENST00000474617 ERBINQ96RT1 1412 aa30.92■■■□□ 2.54
CCM2-206ENST00000474617 UNC13BO14795 1591 aa30.92■■■□□ 2.54
CCM2-206ENST00000474617 TEX14Q8IWB6 1497 aa30.91■■■□□ 2.54
CCM2-206ENST00000474617 NPM1P06748 294 aaKnown RBP eCLIP30.87■■■□□ 2.53
CCM2-206ENST00000474617 ARHGEF12Q9NZN5 1544 aa30.86■■■□□ 2.53
CCM2-206ENST00000474617 PKD2Q13563 968 aa30.86■■■□□ 2.53
CCM2-206ENST00000474617 ASXL2Q76L83 1435 aa30.86■■■□□ 2.53
CCM2-206ENST00000474617 L3MBTL2Q969R5 705 aa30.84■■■□□ 2.53
CCM2-206ENST00000474617 FAM135AQ9P2D6 1515 aa30.82■■■□□ 2.52
CCM2-206ENST00000474617 FOXD1Q16676 465 aa30.82■■■□□ 2.52
CCM2-206ENST00000474617 MAGI2Q86UL8 1455 aa30.82■■■□□ 2.52
CCM2-206ENST00000474617 FANCAO15360 1455 aa30.79■■■□□ 2.52
CCM2-206ENST00000474617 IQGAP3Q86VI3 1631 aa30.79■■■□□ 2.52
CCM2-206ENST00000474617 CFAP74Q9C0B2 1584 aa30.77■■■□□ 2.52
CCM2-206ENST00000474617 TRAPPC8Q9Y2L5 1435 aa30.74■■■□□ 2.51
CCM2-206ENST00000474617 ZFYVE16Q7Z3T8 1539 aa30.73■■■□□ 2.51
CCM2-206ENST00000474617 SPAG9O60271 1321 aaKnown RBP30.72■■■□□ 2.51
CCM2-206ENST00000474617 EIF4G2P78344 907 aaKnown RBP eCLIP30.72■■■□□ 2.51
CCM2-206ENST00000474617 INO80Q9ULG1 1556 aaPredicted RBP30.69■■■□□ 2.5
CCM2-206ENST00000474617 ADGRL1O94910 1474 aa30.68■■■□□ 2.5
CCM2-206ENST00000474617 UHRF1BP1Q6BDS2 1440 aa30.68■■■□□ 2.5
CCM2-206ENST00000474617 ATP10AO60312 1499 aa30.67■■■□□ 2.5
CCM2-206ENST00000474617 ATP7AQ04656 1500 aa30.64■■■□□ 2.5
CCM2-206ENST00000474617 EIF2AK4Q9P2K8 1649 aaKnown RBP30.62■■■□□ 2.49
CCM2-206ENST00000474617 SCAPERQ9BY12 1400 aa30.6■■■□□ 2.49
CCM2-206ENST00000474617 DEPDC5O75140 1603 aa30.6■■■□□ 2.49
CCM2-206ENST00000474617 ZNF518AQ6AHZ1 1483 aa30.59■■■□□ 2.49
CCM2-206ENST00000474617 CCDC144AA2RUR9 1427 aa30.59■■■□□ 2.49
CCM2-206ENST00000474617 HSPA5P11021 654 aaKnown RBP30.58■■■□□ 2.49
CCM2-206ENST00000474617 DDX10Q13206 875 aaKnown RBP30.58■■■□□ 2.49
CCM2-206ENST00000474617 CD109Q6YHK3 1445 aa30.56■■■□□ 2.48
CCM2-206ENST00000474617 NBPF8Q3BBV2 869 aa30.54■■■□□ 2.48
CCM2-206ENST00000474617 RALGAPBQ86X10 1494 aa30.54■■■□□ 2.48
CCM2-206ENST00000474617 SPATA31E1Q6ZUB1 1445 aa30.54■■■□□ 2.48
CCM2-206ENST00000474617 NEO1Q92859 1461 aa30.53■■■□□ 2.48
CCM2-206ENST00000474617 AFAP1Q8N556 730 aa30.52■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms