RNA–Protein interactions for RNA: ENST00000474557.1

HMGN1P10-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 10, humanhuman

BASIC

Gene HMGN1P10, Length 553 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P10-201ENST00000474557 TMEM92Q6UXU6 159 aa11.64□□□□□ -0.55
HMGN1P10-201ENST00000474557 HCSTQ9UBK5 93 aa11.64□□□□□ -0.55
HMGN1P10-201ENST00000474557 SOX12O15370 315 aa11.63□□□□□ -0.55
HMGN1P10-201ENST00000474557 TRIM41Q8WV44 630 aa11.63□□□□□ -0.55
HMGN1P10-201ENST00000474557 PBX2P40425 430 aa11.62□□□□□ -0.55
HMGN1P10-201ENST00000474557 KHSRPQ92945 711 aaKnown RBP eCLIP11.51□□□□□ -0.57
HMGN1P10-201ENST00000474557 IFNLR1Q8IU57 520 aaPredicted RBP11.48□□□□□ -0.57
HMGN1P10-201ENST00000474557 PHF8Q9UPP1 1060 aa11.47□□□□□ -0.57
HMGN1P10-201ENST00000474557 MS4A4AQ96JQ5 239 aa11.46□□□□□ -0.57
HMGN1P10-201ENST00000474557 NUDT7P0C024 238 aa11.44□□□□□ -0.58
HMGN1P10-201ENST00000474557 RIOK3O14730 519 aaKnown RBP11.43□□□□□ -0.58
HMGN1P10-201ENST00000474557 NLRP6P59044 892 aa11.43□□□□□ -0.58
HMGN1P10-201ENST00000474557 AXIN2Q9Y2T1 843 aa11.43□□□□□ -0.58
HMGN1P10-201ENST00000474557 ADGRD1Q6QNK2 874 aa11.42□□□□□ -0.58
HMGN1P10-201ENST00000474557 PSDA5PKW4 1024 aaPredicted RBP11.41□□□□□ -0.58
HMGN1P10-201ENST00000474557 LHX6Q9UPM6 363 aa11.41□□□□□ -0.58
HMGN1P10-201ENST00000474557 ARHGAP33O14559 1287 aa11.4□□□□□ -0.58
HMGN1P10-201ENST00000474557 VGFO15240 615 aaPredicted RBP11.4□□□□□ -0.58
HMGN1P10-201ENST00000474557 STAC3Q96MF2 364 aa11.4□□□□□ -0.58
HMGN1P10-201ENST00000474557 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.39□□□□□ -0.59
HMGN1P10-201ENST00000474557 ZFP91Q96JP5 570 aaPredicted RBP11.39□□□□□ -0.59
HMGN1P10-201ENST00000474557 PCDHGA4Q9Y5G9 962 aa11.36□□□□□ -0.59
HMGN1P10-201ENST00000474557 TK2O00142 265 aa11.35□□□□□ -0.59
HMGN1P10-201ENST00000474557 RGS20O76081 388 aa11.35□□□□□ -0.59
HMGN1P10-201ENST00000474557 SLC34A2O95436 690 aa11.35□□□□□ -0.59
HMGN1P10-201ENST00000474557 POTEEQ6S8J3 1075 aa11.35□□□□□ -0.59
HMGN1P10-201ENST00000474557 TAOK2Q9UL54 1235 aa11.34□□□□□ -0.59
HMGN1P10-201ENST00000474557 C2orf72A6NCS6 295 aa11.32□□□□□ -0.6
HMGN1P10-201ENST00000474557 IRX2Q9BZI1 471 aaPredicted RBP11.31□□□□□ -0.6
HMGN1P10-201ENST00000474557 KIF3CO14782 793 aa11.3□□□□□ -0.6
HMGN1P10-201ENST00000474557 KCTD12Q96CX2 325 aaKnown RBP11.3□□□□□ -0.6
HMGN1P10-201ENST00000474557 TMC2Q8TDI7 906 aa11.29□□□□□ -0.6
HMGN1P10-201ENST00000474557 KCNH8Q96L42 1107 aa11.28□□□□□ -0.6
HMGN1P10-201ENST00000474557 FBXO22Q8NEZ5 403 aa11.26□□□□□ -0.61
HMGN1P10-201ENST00000474557 HRO43593 1189 aa11.25□□□□□ -0.61
HMGN1P10-201ENST00000474557 RNF25Q96BH1 459 aaPredicted RBP11.23□□□□□ -0.61
HMGN1P10-201ENST00000474557 BCL11BQ9C0K0 894 aaPredicted RBP11.22□□□□□ -0.61
HMGN1P10-201ENST00000474557 PPP4R3BQ5MIZ7 849 aa11.21□□□□□ -0.61
HMGN1P10-201ENST00000474557 PSEN2P49810 448 aa11.19□□□□□ -0.62
HMGN1P10-201ENST00000474557 IFFO2Q5TF58 517 aa11.19□□□□□ -0.62
HMGN1P10-201ENST00000474557 DMRTA1Q5VZB9 504 aa11.19□□□□□ -0.62
HMGN1P10-201ENST00000474557 STK24Q9Y6E0 443 aa11.19□□□□□ -0.62
HMGN1P10-201ENST00000474557 PTPN5P54829 565 aa11.18□□□□□ -0.62
HMGN1P10-201ENST00000474557 MFRPQ9BY79 579 aa11.16□□□□□ -0.62
HMGN1P10-201ENST00000474557 TBC1D12O60347 775 aa11.13□□□□□ -0.63
HMGN1P10-201ENST00000474557 A0A0G2JS52 829 aa11.11□□□□□ -0.63
HMGN1P10-201ENST00000474557 PTCD2Q8WV60 388 aaKnown RBP11.11□□□□□ -0.63
HMGN1P10-201ENST00000474557 STK25O00506 426 aa11.1□□□□□ -0.63
HMGN1P10-201ENST00000474557 KCNK17Q96T54 332 aa11.1□□□□□ -0.63
HMGN1P10-201ENST00000474557 GOLGA8CPA6NN73 597 aa11.09□□□□□ -0.63
HMGN1P10-201ENST00000474557 KDM4FA0A1W2PPD8 638 aa11.08□□□□□ -0.64
HMGN1P10-201ENST00000474557 VPS9D1Q9Y2B5 631 aa11.06□□□□□ -0.64
HMGN1P10-201ENST00000474557 THSD4Q6ZMP0 1018 aa11.03□□□□□ -0.64
HMGN1P10-201ENST00000474557 Q6ZNB5 142 aa11.03□□□□□ -0.64
HMGN1P10-201ENST00000474557 SLC4A5Q9BY07 1137 aa11.01□□□□□ -0.65
HMGN1P10-201ENST00000474557 WNT2BQ93097 391 aa11□□□□□ -0.65
HMGN1P10-201ENST00000474557 FOXK1P85037 733 aa10.99□□□□□ -0.65
HMGN1P10-201ENST00000474557 PLPP6Q8IY26 295 aa10.99□□□□□ -0.65
HMGN1P10-201ENST00000474557 MRPL50Q8N5N7 158 aaKnown RBP10.99□□□□□ -0.65
HMGN1P10-201ENST00000474557 NBPF3Q9H094 633 aa10.94□□□□□ -0.66
HMGN1P10-201ENST00000474557 PTPREP23469 700 aa10.93□□□□□ -0.66
HMGN1P10-201ENST00000474557 ZNF454Q8N9F8 522 aa10.93□□□□□ -0.66
HMGN1P10-201ENST00000474557 BCL2L12Q9HB09 334 aa10.93□□□□□ -0.66
HMGN1P10-201ENST00000474557 GPHNQ9NQX3 736 aaPredicted RBP10.93□□□□□ -0.66
HMGN1P10-201ENST00000474557 BHMG1C9JSJ3 638 aaPredicted RBP10.92□□□□□ -0.66
HMGN1P10-201ENST00000474557 LAPTM4AQ15012 233 aa10.91□□□□□ -0.66
HMGN1P10-201ENST00000474557 PPP1R37O75864 691 aa10.88□□□□□ -0.67
HMGN1P10-201ENST00000474557 ECM2O94769 699 aaPredicted RBP10.86□□□□□ -0.67
HMGN1P10-201ENST00000474557 DSG2Q14126 1118 aa10.86□□□□□ -0.67
HMGN1P10-201ENST00000474557 ITGBL1O95965 494 aaPredicted RBP10.85□□□□□ -0.67
HMGN1P10-201ENST00000474557 ZBED2Q9BTP6 218 aa10.85□□□□□ -0.67
HMGN1P10-201ENST00000474557 ANKK1Q8NFD2 765 aa10.84□□□□□ -0.67
HMGN1P10-201ENST00000474557 NYAP1Q6ZVC0 841 aa10.82□□□□□ -0.68
HMGN1P10-201ENST00000474557 OXER1Q8TDS5 423 aa10.81□□□□□ -0.68
HMGN1P10-201ENST00000474557 FOSBP53539 338 aa10.8□□□□□ -0.68
HMGN1P10-201ENST00000474557 UPF1Q92900 1129 aaKnown RBP eCLIP10.8□□□□□ -0.68
HMGN1P10-201ENST00000474557 KCNC4Q03721 635 aa10.78□□□□□ -0.68
HMGN1P10-201ENST00000474557 TRAF7Q6Q0C0 670 aa10.77□□□□□ -0.69
HMGN1P10-201ENST00000474557 ZDHHC16Q969W1 377 aa10.76□□□□□ -0.69
HMGN1P10-201ENST00000474557 JPH4Q96JJ6 628 aa10.76□□□□□ -0.69
HMGN1P10-201ENST00000474557 GFRA3O60609 400 aa10.74□□□□□ -0.69
HMGN1P10-201ENST00000474557 RABGEF1Q9UJ41 708 aa10.73□□□□□ -0.69
HMGN1P10-201ENST00000474557 LAPTM4BQ86VI4 370 aa10.71□□□□□ -0.69
HMGN1P10-201ENST00000474557 SOWAHBA6NEL2 793 aa10.69□□□□□ -0.7
HMGN1P10-201ENST00000474557 RGL2O15211 777 aa10.69□□□□□ -0.7
HMGN1P10-201ENST00000474557 ADAM33Q9BZ11 813 aa10.69□□□□□ -0.7
HMGN1P10-201ENST00000474557 PPP1R3GB7ZBB8 358 aa10.68□□□□□ -0.7
HMGN1P10-201ENST00000474557 BCAMP50895 628 aa10.68□□□□□ -0.7
HMGN1P10-201ENST00000474557 ANO8Q9HCE9 1232 aaPredicted RBP10.68□□□□□ -0.7
HMGN1P10-201ENST00000474557 EVI5O60447 810 aa10.66□□□□□ -0.7
HMGN1P10-201ENST00000474557 PPP1R15BQ5SWA1 713 aa10.66□□□□□ -0.7
HMGN1P10-201ENST00000474557 NRG2O14511 850 aaPredicted RBP10.62□□□□□ -0.71
HMGN1P10-201ENST00000474557 ZFRQ96KR1 1074 aaKnown RBP10.62□□□□□ -0.71
HMGN1P10-201ENST00000474557 WBP1LQ9NX94 342 aa10.62□□□□□ -0.71
HMGN1P10-201ENST00000474557 RYDENQ9NUL5 291 aaKnown RBP10.61□□□□□ -0.71
HMGN1P10-201ENST00000474557 PROX2Q3B8N5 592 aa10.6□□□□□ -0.71
HMGN1P10-201ENST00000474557 ZNF787Q6DD87 383 aa10.59□□□□□ -0.71
HMGN1P10-201ENST00000474557 LCE2BO14633 110 aa10.58□□□□□ -0.72
HMGN1P10-201ENST00000474557 PDE4AP27815 886 aa10.58□□□□□ -0.72
HMGN1P10-201ENST00000474557 MAP3K9P80192 1104 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms