RNA–Protein interactions for RNA: ENST00000474270.1

ABCD4-207, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 5

Gene ABCD4, Length 794 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-207ENST00000474270 PLPPR3Q6T4P5 718 aa20.85■□□□□ 0.93
ABCD4-207ENST00000474270 ZFYVE16Q7Z3T8 1539 aa20.83■□□□□ 0.93
ABCD4-207ENST00000474270 PLCH2O75038 1416 aa20.82■□□□□ 0.92
ABCD4-207ENST00000474270 FER1L4A9Z1Z3 1794 aa20.82■□□□□ 0.92
ABCD4-207ENST00000474270 YEATS2Q9ULM3 1422 aa20.79■□□□□ 0.92
ABCD4-207ENST00000474270 CDC42BPAQ5VT25 1732 aa20.79■□□□□ 0.92
ABCD4-207ENST00000474270 TROQ12816 1431 aaPredicted RBP20.78■□□□□ 0.92
ABCD4-207ENST00000474270 SCAPERQ9BY12 1400 aa20.78■□□□□ 0.92
ABCD4-207ENST00000474270 ARHGAP5Q13017 1502 aa20.78■□□□□ 0.92
ABCD4-207ENST00000474270 MLECQ14165 292 aa20.78■□□□□ 0.92
ABCD4-207ENST00000474270 CDK11AQ9UQ88 783 aaPredicted RBP20.78■□□□□ 0.92
ABCD4-207ENST00000474270 PREX2Q70Z35 1606 aa20.78■□□□□ 0.92
ABCD4-207ENST00000474270 POGZQ7Z3K3 1410 aa20.78■□□□□ 0.92
ABCD4-207ENST00000474270 CLIP1P30622 1438 aa20.77■□□□□ 0.91
ABCD4-207ENST00000474270 FBXO41Q8TF61 875 aa20.74■□□□□ 0.91
ABCD4-207ENST00000474270 CASKIN1Q8WXD9 1431 aa20.74■□□□□ 0.91
ABCD4-207ENST00000474270 CCDC18Q5T9S5 1454 aa20.74■□□□□ 0.91
ABCD4-207ENST00000474270 ITSN2Q9NZM3 1697 aa20.73■□□□□ 0.91
ABCD4-207ENST00000474270 MAGI2Q86UL8 1455 aa20.73■□□□□ 0.91
ABCD4-207ENST00000474270 LMTK3Q96Q04 1460 aa20.73■□□□□ 0.91
ABCD4-207ENST00000474270 HSPA2P54652 639 aa20.72■□□□□ 0.91
ABCD4-207ENST00000474270 EFCAB2Q5VUJ9 269 aa20.72■□□□□ 0.91
ABCD4-207ENST00000474270 FYCO1Q9BQS8 1478 aa20.7■□□□□ 0.9
ABCD4-207ENST00000474270 LOC105371045A0A1W2PR82 267 aa20.7■□□□□ 0.9
ABCD4-207ENST00000474270 KDM5CP41229 1560 aa20.68■□□□□ 0.9
ABCD4-207ENST00000474270 ZNF518AQ6AHZ1 1483 aa20.67■□□□□ 0.9
ABCD4-207ENST00000474270 ABCA6Q8N139 1617 aa20.67■□□□□ 0.9
ABCD4-207ENST00000474270 MYT1LQ9UL68 1186 aa20.66■□□□□ 0.9
ABCD4-207ENST00000474270 ABCC1P33527 1531 aa20.65■□□□□ 0.9
ABCD4-207ENST00000474270 ATP10AO60312 1499 aa20.65■□□□□ 0.9
ABCD4-207ENST00000474270 DIP2CQ9Y2E4 1556 aa20.64■□□□□ 0.9
ABCD4-207ENST00000474270 C9orf84Q5VXU9 1444 aa20.64■□□□□ 0.89
ABCD4-207ENST00000474270 AFAP1Q8N556 730 aa20.62■□□□□ 0.89
ABCD4-207ENST00000474270 ARHGEF12Q9NZN5 1544 aa20.61■□□□□ 0.89
ABCD4-207ENST00000474270 KIDINS220Q9ULH0 1771 aa20.61■□□□□ 0.89
ABCD4-207ENST00000474270 SAMD9LQ8IVG5 1584 aa20.59■□□□□ 0.89
ABCD4-207ENST00000474270 CEBPAP49715 358 aaPredicted RBP20.59■□□□□ 0.89
ABCD4-207ENST00000474270 PREX1Q8TCU6 1659 aa20.58■□□□□ 0.89
ABCD4-207ENST00000474270 TRAPPC8Q9Y2L5 1435 aa20.57■□□□□ 0.88
ABCD4-207ENST00000474270 REREQ9P2R6 1566 aa20.55■□□□□ 0.88
ABCD4-207ENST00000474270 SUPT6HQ7KZ85 1726 aaKnown RBP20.55■□□□□ 0.88
ABCD4-207ENST00000474270 C3P01024 1663 aa20.54■□□□□ 0.88
ABCD4-207ENST00000474270 SYCP2Q9BX26 1530 aa20.54■□□□□ 0.88
ABCD4-207ENST00000474270 MLH3Q9UHC1 1453 aa20.53■□□□□ 0.88
ABCD4-207ENST00000474270 ZNF777Q9ULD5 760 aaPredicted RBP20.52■□□□□ 0.88
ABCD4-207ENST00000474270 GPATCH8Q9UKJ3 1502 aaKnown RBP20.51■□□□□ 0.87
ABCD4-207ENST00000474270 SETD1BQ9UPS6 1966 aaKnown RBP20.5■□□□□ 0.87
ABCD4-207ENST00000474270 TIAM1Q13009 1591 aa20.48■□□□□ 0.87
ABCD4-207ENST00000474270 CEP162Q5TB80 1403 aa20.48■□□□□ 0.87
ABCD4-207ENST00000474270 CERKQ8TCT0 537 aa20.48■□□□□ 0.87
ABCD4-207ENST00000474270 MTUS2Q5JR59 1369 aa20.46■□□□□ 0.87
ABCD4-207ENST00000474270 ESF1Q9H501 851 aaKnown RBP20.46■□□□□ 0.87
ABCD4-207ENST00000474270 EHBP1L1Q8N3D4 1523 aa20.46■□□□□ 0.87
ABCD4-207ENST00000474270 INO80Q9ULG1 1556 aaPredicted RBP20.46■□□□□ 0.87
ABCD4-207ENST00000474270 AGLP35573 1532 aa20.45■□□□□ 0.86
ABCD4-207ENST00000474270 STRCQ7RTU9 1775 aa20.44■□□□□ 0.86
ABCD4-207ENST00000474270 CCNB3Q8WWL7 1395 aa20.44■□□□□ 0.86
ABCD4-207ENST00000474270 ATP7AQ04656 1500 aa20.43■□□□□ 0.86
ABCD4-207ENST00000474270 HNRNPMP52272 730 aaKnown RBP eCLIP20.43■□□□□ 0.86
ABCD4-207ENST00000474270 UHRF1BP1Q6BDS2 1440 aa20.43■□□□□ 0.86
ABCD4-207ENST00000474270 MROH2AA6NES4 1674 aa20.42■□□□□ 0.86
ABCD4-207ENST00000474270 CLTCQ00610 1675 aaKnown RBP20.42■□□□□ 0.86
ABCD4-207ENST00000474270 ADGBQ8N7X0 1667 aa20.42■□□□□ 0.86
ABCD4-207ENST00000474270 CFDP1Q9UEE9 299 aaPredicted RBP20.4■□□□□ 0.86
ABCD4-207ENST00000474270 PLEKHH2Q8IVE3 1493 aa20.39■□□□□ 0.85
ABCD4-207ENST00000474270 SPAG9O60271 1321 aaKnown RBP20.38■□□□□ 0.85
ABCD4-207ENST00000474270 DMRT2Q9Y5R5 561 aa20.38■□□□□ 0.85
ABCD4-207ENST00000474270 PLXNC1O60486 1568 aa20.36■□□□□ 0.85
ABCD4-207ENST00000474270 KIAA1107Q9UPP5 1409 aa20.36■□□□□ 0.85
ABCD4-207ENST00000474270 ZNF644Q9H582 1327 aaPredicted RBP20.34■□□□□ 0.85
ABCD4-207ENST00000474270 A2MP01023 1474 aa20.31■□□□□ 0.84
ABCD4-207ENST00000474270 NCOA2Q15596 1464 aa20.3■□□□□ 0.84
ABCD4-207ENST00000474270 CNTLNQ9NXG0 1405 aa20.3■□□□□ 0.84
ABCD4-207ENST00000474270 CAMSAP2Q08AD1 1489 aa20.28■□□□□ 0.84
ABCD4-207ENST00000474270 MBD5Q9P267 1494 aa20.28■□□□□ 0.84
ABCD4-207ENST00000474270 MYO3AQ8NEV4 1616 aa20.26■□□□□ 0.83
ABCD4-207ENST00000474270 PTPRTO14522 1441 aa20.26■□□□□ 0.83
ABCD4-207ENST00000474270 ZMYM3Q14202 1370 aa20.25■□□□□ 0.83
ABCD4-207ENST00000474270 VPS8Q8N3P4 1428 aa20.25■□□□□ 0.83
ABCD4-207ENST00000474270 ZNF142P52746 1687 aaPredicted RBP20.24■□□□□ 0.83
ABCD4-207ENST00000474270 GGT6Q6P531 493 aa20.24■□□□□ 0.83
ABCD4-207ENST00000474270 CCDC141Q6ZP82 1450 aa20.22■□□□□ 0.83
ABCD4-207ENST00000474270 NCOA1Q15788 1441 aa20.21■□□□□ 0.83
ABCD4-207ENST00000474270 LRRC9Q6ZRR7 1453 aa20.21■□□□□ 0.83
ABCD4-207ENST00000474270 CAMSAP1Q5T5Y3 1602 aa20.2■□□□□ 0.82
ABCD4-207ENST00000474270 NPATQ14207 1427 aa20.2■□□□□ 0.82
ABCD4-207ENST00000474270 ARHGEF5Q12774 1597 aa20.2■□□□□ 0.82
ABCD4-207ENST00000474270 RTEL1-TNFRSF6BF6WH68 1400 aa20.19■□□□□ 0.82
ABCD4-207ENST00000474270 NCKAP5LQ9HCH0 1330 aa20.18■□□□□ 0.82
ABCD4-207ENST00000474270 TRIM26Q12899 539 aaPredicted RBP20.17■□□□□ 0.82
ABCD4-207ENST00000474270 CFAP65Q6ZU64 1925 aaKnown RBP20.17■□□□□ 0.82
ABCD4-207ENST00000474270 CEP170BQ9Y4F5 1589 aaPredicted RBP20.16■□□□□ 0.82
ABCD4-207ENST00000474270 DISP3Q9P2K9 1392 aa20.15■□□□□ 0.82
ABCD4-207ENST00000474270 LTBP4Q8N2S1 1624 aa20.15■□□□□ 0.82
ABCD4-207ENST00000474270 PTPRKQ15262 1439 aa20.14■□□□□ 0.81
ABCD4-207ENST00000474270 DHX29Q7Z478 1369 aaKnown RBP20.13■□□□□ 0.81
ABCD4-207ENST00000474270 POLR1AO95602 1720 aaPredicted RBP20.13■□□□□ 0.81
ABCD4-207ENST00000474270 CROCC2H7BZ55 1655 aa20.12■□□□□ 0.81
ABCD4-207ENST00000474270 MAP3K1Q13233 1512 aa20.12■□□□□ 0.81
ABCD4-207ENST00000474270 KANK4Q5T7N3 995 aaPredicted RBP20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms