RNA–Protein interactions for RNA: ENST00000472518.1

RTKN-207, Transcript of rhotekin, humanhuman

TSL 1 (best)

Gene RTKN, Length 1,105 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTKN-207ENST00000472518 SIGLEC1Q9BZZ2 1709 aa22.86■■□□□ 1.25
RTKN-207ENST00000472518 TROQ12816 1431 aaPredicted RBP22.86■■□□□ 1.25
RTKN-207ENST00000472518 ATP1B4Q9UN42 357 aaPredicted RBP22.86■■□□□ 1.25
RTKN-207ENST00000472518 CCDC18Q5T9S5 1454 aa22.85■■□□□ 1.25
RTKN-207ENST00000472518 RIMS1Q86UR5 1692 aaKnown RBP22.85■■□□□ 1.25
RTKN-207ENST00000472518 CASKIN1Q8WXD9 1431 aa22.83■■□□□ 1.25
RTKN-207ENST00000472518 ARID4BQ4LE39 1312 aaPredicted RBP22.82■■□□□ 1.24
RTKN-207ENST00000472518 EFCAB2Q5VUJ9 269 aa22.81■■□□□ 1.24
RTKN-207ENST00000472518 ZFYVE16Q7Z3T8 1539 aa22.81■■□□□ 1.24
RTKN-207ENST00000472518 POGZQ7Z3K3 1410 aa22.81■■□□□ 1.24
RTKN-207ENST00000472518 SCAPERQ9BY12 1400 aa22.79■■□□□ 1.24
RTKN-207ENST00000472518 LRRIQ1Q96JM4 1722 aa22.79■■□□□ 1.24
RTKN-207ENST00000472518 HSPA2P54652 639 aa22.78■■□□□ 1.24
RTKN-207ENST00000472518 FYCO1Q9BQS8 1478 aa22.78■■□□□ 1.24
RTKN-207ENST00000472518 YEATS2Q9ULM3 1422 aa22.76■■□□□ 1.23
RTKN-207ENST00000472518 ZNF518AQ6AHZ1 1483 aa22.73■■□□□ 1.23
RTKN-207ENST00000472518 ARHGAP5Q13017 1502 aa22.73■■□□□ 1.23
RTKN-207ENST00000472518 PREX2Q70Z35 1606 aa22.7■■□□□ 1.22
RTKN-207ENST00000472518 PLPPR3Q6T4P5 718 aa22.69■■□□□ 1.22
RTKN-207ENST00000472518 KDM5CP41229 1560 aa22.68■■□□□ 1.22
RTKN-207ENST00000472518 CDC42BPBQ9Y5S2 1711 aa22.68■■□□□ 1.22
RTKN-207ENST00000472518 ATP10AO60312 1499 aa22.67■■□□□ 1.22
RTKN-207ENST00000472518 C9orf84Q5VXU9 1444 aa22.67■■□□□ 1.22
RTKN-207ENST00000472518 FER1L4A9Z1Z3 1794 aa22.63■■□□□ 1.21
RTKN-207ENST00000472518 ABCC1P33527 1531 aa22.62■■□□□ 1.21
RTKN-207ENST00000472518 MLECQ14165 292 aa22.61■■□□□ 1.21
RTKN-207ENST00000472518 REREQ9P2R6 1566 aa22.61■■□□□ 1.21
RTKN-207ENST00000472518 MLH3Q9UHC1 1453 aa22.6■■□□□ 1.21
RTKN-207ENST00000472518 CDC42BPAQ5VT25 1732 aa22.6■■□□□ 1.21
RTKN-207ENST00000472518 ARHGEF12Q9NZN5 1544 aa22.59■■□□□ 1.21
RTKN-207ENST00000472518 ITSN2Q9NZM3 1697 aa22.58■■□□□ 1.21
RTKN-207ENST00000472518 CERKQ8TCT0 537 aa22.58■■□□□ 1.21
RTKN-207ENST00000472518 DIP2CQ9Y2E4 1556 aa22.55■■□□□ 1.2
RTKN-207ENST00000472518 AFAP1Q8N556 730 aa22.54■■□□□ 1.2
RTKN-207ENST00000472518 PLEKHH2Q8IVE3 1493 aa22.52■■□□□ 1.2
RTKN-207ENST00000472518 AGLP35573 1532 aa22.52■■□□□ 1.19
RTKN-207ENST00000472518 MYT1LQ9UL68 1186 aa22.51■■□□□ 1.19
RTKN-207ENST00000472518 ABCA6Q8N139 1617 aa22.5■■□□□ 1.19
RTKN-207ENST00000472518 PREX1Q8TCU6 1659 aa22.5■■□□□ 1.19
RTKN-207ENST00000472518 CEBPAP49715 358 aaPredicted RBP22.5■■□□□ 1.19
RTKN-207ENST00000472518 GPATCH8Q9UKJ3 1502 aaKnown RBP22.5■■□□□ 1.19
RTKN-207ENST00000472518 MTUS2Q5JR59 1369 aa22.5■■□□□ 1.19
RTKN-207ENST00000472518 TRAPPC8Q9Y2L5 1435 aa22.49■■□□□ 1.19
RTKN-207ENST00000472518 CEP162Q5TB80 1403 aa22.48■■□□□ 1.19
RTKN-207ENST00000472518 STRCQ7RTU9 1775 aa22.48■■□□□ 1.19
RTKN-207ENST00000472518 KIAA1107Q9UPP5 1409 aa22.48■■□□□ 1.19
RTKN-207ENST00000472518 EHBP1L1Q8N3D4 1523 aa22.47■■□□□ 1.19
RTKN-207ENST00000472518 SAMD9LQ8IVG5 1584 aa22.47■■□□□ 1.19
RTKN-207ENST00000472518 KIDINS220Q9ULH0 1771 aa22.47■■□□□ 1.19
RTKN-207ENST00000472518 SETD1BQ9UPS6 1966 aaKnown RBP22.46■■□□□ 1.19
RTKN-207ENST00000472518 CCNB3Q8WWL7 1395 aa22.46■■□□□ 1.19
RTKN-207ENST00000472518 ILDR2Q71H61 639 aa22.44■■□□□ 1.18
RTKN-207ENST00000472518 SYCP2Q9BX26 1530 aa22.44■■□□□ 1.18
RTKN-207ENST00000472518 CFDP1Q9UEE9 299 aaPredicted RBP22.43■■□□□ 1.18
RTKN-207ENST00000472518 ZNF777Q9ULD5 760 aaPredicted RBP22.4■■□□□ 1.18
RTKN-207ENST00000472518 CNTLNQ9NXG0 1405 aa22.4■■□□□ 1.18
RTKN-207ENST00000472518 SPAG9O60271 1321 aaKnown RBP22.38■■□□□ 1.17
RTKN-207ENST00000472518 ESF1Q9H501 851 aaKnown RBP22.38■■□□□ 1.17
RTKN-207ENST00000472518 TIAM1Q13009 1591 aa22.38■■□□□ 1.17
RTKN-207ENST00000472518 ATP7AQ04656 1500 aa22.37■■□□□ 1.17
RTKN-207ENST00000472518 INO80Q9ULG1 1556 aaPredicted RBP22.37■■□□□ 1.17
RTKN-207ENST00000472518 UHRF1BP1Q6BDS2 1440 aa22.36■■□□□ 1.17
RTKN-207ENST00000472518 DISP3Q9P2K9 1392 aa22.35■■□□□ 1.17
RTKN-207ENST00000472518 SUPT6HQ7KZ85 1726 aaKnown RBP22.34■■□□□ 1.17
RTKN-207ENST00000472518 C3P01024 1663 aa22.33■■□□□ 1.17
RTKN-207ENST00000472518 MROH2AA6NES4 1674 aa22.33■■□□□ 1.16
RTKN-207ENST00000472518 HNRNPMP52272 730 aaKnown RBP eCLIP22.32■■□□□ 1.16
RTKN-207ENST00000472518 PLXNC1O60486 1568 aa22.32■■□□□ 1.16
RTKN-207ENST00000472518 ADGBQ8N7X0 1667 aa22.31■■□□□ 1.16
RTKN-207ENST00000472518 LTBP4Q8N2S1 1624 aa22.3■■□□□ 1.16
RTKN-207ENST00000472518 A2MP01023 1474 aa22.29■■□□□ 1.16
RTKN-207ENST00000472518 RTEL1-TNFRSF6BF6WH68 1400 aa22.29■■□□□ 1.16
RTKN-207ENST00000472518 VPS8Q8N3P4 1428 aa22.29■■□□□ 1.16
RTKN-207ENST00000472518 PTPRTO14522 1441 aa22.27■■□□□ 1.16
RTKN-207ENST00000472518 RSPH4AQ5TD94 716 aa22.27■■□□□ 1.16
RTKN-207ENST00000472518 NCOA2Q15596 1464 aa22.27■■□□□ 1.16
RTKN-207ENST00000472518 MBD5Q9P267 1494 aa22.27■■□□□ 1.16
RTKN-207ENST00000472518 SPATA31D1Q6ZQQ2 1576 aa22.25■■□□□ 1.15
RTKN-207ENST00000472518 NPATQ14207 1427 aa22.25■■□□□ 1.15
RTKN-207ENST00000472518 SOCS7O14512 581 aa22.25■■□□□ 1.15
RTKN-207ENST00000472518 PPP6R1Q9UPN7 881 aa22.25■■□□□ 1.15
RTKN-207ENST00000472518 DMRT2Q9Y5R5 561 aa22.25■■□□□ 1.15
RTKN-207ENST00000472518 MAP3K1Q13233 1512 aa22.25■■□□□ 1.15
RTKN-207ENST00000472518 NCOA1Q15788 1441 aa22.23■■□□□ 1.15
RTKN-207ENST00000472518 CCDC141Q6ZP82 1450 aa22.22■■□□□ 1.15
RTKN-207ENST00000472518 CAMSAP2Q08AD1 1489 aa22.21■■□□□ 1.15
RTKN-207ENST00000472518 LRRC9Q6ZRR7 1453 aa22.2■■□□□ 1.14
RTKN-207ENST00000472518 FAM135AQ9P2D6 1515 aa22.2■■□□□ 1.14
RTKN-207ENST00000472518 ZNF644Q9H582 1327 aaPredicted RBP22.19■■□□□ 1.14
RTKN-207ENST00000472518 ARHGEF5Q12774 1597 aa22.18■■□□□ 1.14
RTKN-207ENST00000472518 ZMYM3Q14202 1370 aa22.18■■□□□ 1.14
RTKN-207ENST00000472518 CLTCQ00610 1675 aaKnown RBP22.17■■□□□ 1.14
RTKN-207ENST00000472518 DHX29Q7Z478 1369 aaKnown RBP22.16■■□□□ 1.14
RTKN-207ENST00000472518 CAMSAP1Q5T5Y3 1602 aa22.13■■□□□ 1.13
RTKN-207ENST00000472518 IQSEC2Q5JU85 1478 aa22.13■■□□□ 1.13
RTKN-207ENST00000472518 LOC105371045A0A1W2PR82 267 aa22.12■■□□□ 1.13
RTKN-207ENST00000472518 ZNF142P52746 1687 aaPredicted RBP22.11■■□□□ 1.13
RTKN-207ENST00000472518 GGT6Q6P531 493 aa22.11■■□□□ 1.13
RTKN-207ENST00000472518 MIA2Q96PC5 1412 aa22.11■■□□□ 1.13
RTKN-207ENST00000472518 TSPY4P0CV99 314 aa22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms