RNA–Protein interactions for RNA: ENST00000472518.1

RTKN-207, Transcript of rhotekin, humanhuman

TSL 1 (best)

Gene RTKN, Length 1,105 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTKN-207ENST00000472518 NISCHQ9Y2I1 1504 aa34.86■■■■□ 3.17
RTKN-207ENST00000472518 ABCC9O60706 1549 aa31.44■■■□□ 2.62
RTKN-207ENST00000472518 CCDC180Q9P1Z9 1646 aa31.34■■■□□ 2.61
RTKN-207ENST00000472518 DNAJC5BQ9UF47 199 aa29.95■■■□□ 2.39
RTKN-207ENST00000472518 RB1CC1Q8TDY2 1594 aa29.71■■■□□ 2.35
RTKN-207ENST00000472518 NACADO15069 1562 aa29.56■■■□□ 2.32
RTKN-207ENST00000472518 MYO15BQ96JP2 1530 aa29.29■■■□□ 2.28
RTKN-207ENST00000472518 PABPN1Q86U42 306 aaKnown RBP eCLIP29.19■■■□□ 2.26
RTKN-207ENST00000472518 DCAF8L2P0C7V8 631 aa29.17■■■□□ 2.26
RTKN-207ENST00000472518 UNC13AQ9UPW8 1703 aa29.06■■■□□ 2.24
RTKN-207ENST00000472518 BICRAQ9NZM4 1560 aa28.94■■■□□ 2.22
RTKN-207ENST00000472518 ZCCHC6Q5VYS8 1495 aaKnown RBP28.94■■■□□ 2.22
RTKN-207ENST00000472518 DCAF1Q9Y4B6 1507 aa28.94■■■□□ 2.22
RTKN-207ENST00000472518 SHROOM4Q9ULL8 1493 aa28.61■■■□□ 2.17
RTKN-207ENST00000472518 SCRIBQ14160 1630 aa28.38■■■□□ 2.13
RTKN-207ENST00000472518 CC2D2AQ9P2K1 1620 aa28.36■■■□□ 2.13
RTKN-207ENST00000472518 CECR2Q9BXF3 1484 aa28.33■■■□□ 2.13
RTKN-207ENST00000472518 EIF4G1Q04637 1599 aaKnown RBP28.2■■■□□ 2.1
RTKN-207ENST00000472518 DNAJC5Q9H3Z4 198 aa27.67■■■□□ 2.02
RTKN-207ENST00000472518 NCAPD3P42695 1498 aa27.25■■□□□ 1.95
RTKN-207ENST00000472518 CUX2O14529 1486 aa27.19■■□□□ 1.94
RTKN-207ENST00000472518 SMARCA4P51532 1647 aa27.17■■□□□ 1.94
RTKN-207ENST00000472518 SMARCA2P51531 1590 aa27.16■■□□□ 1.94
RTKN-207ENST00000472518 ATAD2BQ9ULI0 1458 aa27.13■■□□□ 1.93
RTKN-207ENST00000472518 BAZ1AQ9NRL2 1556 aaPredicted RBP27.11■■□□□ 1.93
RTKN-207ENST00000472518 HMGXB3Q12766 1538 aa27.11■■□□□ 1.93
RTKN-207ENST00000472518 ERCC6Q03468 1493 aa27.07■■□□□ 1.92
RTKN-207ENST00000472518 PEG3Q9GZU2 1588 aa26.98■■□□□ 1.91
RTKN-207ENST00000472518 NESP48681 1621 aa26.93■■□□□ 1.9
RTKN-207ENST00000472518 BAZ1BQ9UIG0 1483 aaKnown RBP26.9■■□□□ 1.9
RTKN-207ENST00000472518 MROH2BQ7Z745 1585 aa26.78■■□□□ 1.88
RTKN-207ENST00000472518 THOC2Q8NI27 1593 aaKnown RBP26.73■■□□□ 1.87
RTKN-207ENST00000472518 LAMC3Q9Y6N6 1575 aa26.65■■□□□ 1.86
RTKN-207ENST00000472518 KIF21AQ7Z4S6 1674 aa26.52■■□□□ 1.84
RTKN-207ENST00000472518 PDS5BQ9NTI5 1447 aa26.48■■□□□ 1.83
RTKN-207ENST00000472518 WIZO95785 1651 aa26.47■■□□□ 1.83
RTKN-207ENST00000472518 CADPSQ9ULU8 1353 aa26.39■■□□□ 1.82
RTKN-207ENST00000472518 RSF1Q96T23 1441 aaPredicted RBP26.31■■□□□ 1.8
RTKN-207ENST00000472518 TRIM41Q8WV44 630 aa26.28■■□□□ 1.8
RTKN-207ENST00000472518 TOP2AP11388 1531 aaKnown RBP26.24■■□□□ 1.79
RTKN-207ENST00000472518 MRC2Q9UBG0 1479 aa26.24■■□□□ 1.79
RTKN-207ENST00000472518 WDR62O43379 1518 aa26.22■■□□□ 1.79
RTKN-207ENST00000472518 CFTRP13569 1480 aa26.14■■□□□ 1.78
RTKN-207ENST00000472518 CEP164Q9UPV0 1460 aa26.13■■□□□ 1.77
RTKN-207ENST00000472518 FANCD2Q9BXW9 1451 aa26.08■■□□□ 1.77
RTKN-207ENST00000472518 PRDM2Q13029 1718 aa25.98■■□□□ 1.75
RTKN-207ENST00000472518 URB2Q14146 1524 aaKnown RBP25.87■■□□□ 1.73
RTKN-207ENST00000472518 CCDC88BA6NC98 1476 aa25.86■■□□□ 1.73
RTKN-207ENST00000472518 OSCARQ8IYS5 282 aa25.79■■□□□ 1.72
RTKN-207ENST00000472518 ABCC8Q09428 1581 aa25.69■■□□□ 1.7
RTKN-207ENST00000472518 RIMBP3CA6NJZ7 1639 aa25.65■■□□□ 1.7
RTKN-207ENST00000472518 RIMBP3BA6NNM3 1639 aa25.65■■□□□ 1.7
RTKN-207ENST00000472518 RIMBP3Q9UFD9 1639 aa25.65■■□□□ 1.7
RTKN-207ENST00000472518 ZNF608Q9ULD9 1512 aaPredicted RBP25.63■■□□□ 1.69
RTKN-207ENST00000472518 IFT140Q96RY7 1462 aa25.62■■□□□ 1.69
RTKN-207ENST00000472518 TOPBP1Q92547 1522 aa25.59■■□□□ 1.69
RTKN-207ENST00000472518 DNMBPQ6XZF7 1577 aa25.57■■□□□ 1.68
RTKN-207ENST00000472518 ARHGEF11O15085 1522 aa25.53■■□□□ 1.68
RTKN-207ENST00000472518 EIF4G3O43432 1585 aaKnown RBP25.43■■□□□ 1.66
RTKN-207ENST00000472518 TARBP1Q13395 1621 aaKnown RBP25.37■■□□□ 1.65
RTKN-207ENST00000472518 POLA1P09884 1462 aaPredicted RBP25.34■■□□□ 1.65
RTKN-207ENST00000472518 WDR97A6NE52 1622 aa25.3■■□□□ 1.64
RTKN-207ENST00000472518 AQRO60306 1485 aaKnown RBP eCLIP25.3■■□□□ 1.649e-8■■■■□ 20
RTKN-207ENST00000472518 CHD1O14646 1710 aa25.3■■□□□ 1.64
RTKN-207ENST00000472518 ARAP1Q96P48 1450 aa25.29■■□□□ 1.64
RTKN-207ENST00000472518 CYB5RLQ6IPT4 315 aa25.28■■□□□ 1.64
RTKN-207ENST00000472518 SOGA1O94964 1423 aa25.21■■□□□ 1.63
RTKN-207ENST00000472518 FGD5Q6ZNL6 1462 aa25.19■■□□□ 1.62
RTKN-207ENST00000472518 CUX1P39880 1505 aa25.17■■□□□ 1.62
RTKN-207ENST00000472518 RAD54L2Q9Y4B4 1467 aa25.16■■□□□ 1.62
RTKN-207ENST00000472518 SUPT5HO00267 1087 aaKnown RBP25.13■■□□□ 1.61
RTKN-207ENST00000472518 FBLN2P98095 1184 aa25.1■■□□□ 1.61
RTKN-207ENST00000472518 TDRD9Q8NDG6 1382 aaKnown RBP25.08■■□□□ 1.61
RTKN-207ENST00000472518 TRHP20396 242 aaPredicted RBP25.07■■□□□ 1.6
RTKN-207ENST00000472518 MAGI1Q96QZ7 1491 aaPredicted RBP25.07■■□□□ 1.6
RTKN-207ENST00000472518 GRIN2BQ13224 1484 aa25.04■■□□□ 1.6
RTKN-207ENST00000472518 CLASP1Q7Z460 1538 aa25.04■■□□□ 1.6
RTKN-207ENST00000472518 SNAPC4Q5SXM2 1469 aa25.02■■□□□ 1.6
RTKN-207ENST00000472518 ABCA10Q8WWZ4 1543 aa24.98■■□□□ 1.59
RTKN-207ENST00000472518 SYNJ1O43426 1573 aa24.95■■□□□ 1.58
RTKN-207ENST00000472518 SYNJ2O15056 1496 aa24.95■■□□□ 1.58
RTKN-207ENST00000472518 GAPVD1Q14C86 1478 aa24.95■■□□□ 1.58
RTKN-207ENST00000472518 PBRM1Q86U86 1689 aa24.94■■□□□ 1.58
RTKN-207ENST00000472518 CHMP7Q8WUX9 453 aaPredicted RBP24.92■■□□□ 1.58
RTKN-207ENST00000472518 ABCA5Q8WWZ7 1642 aa24.91■■□□□ 1.58
RTKN-207ENST00000472518 BIVM-ERCC5R4GMW8 1640 aa24.9■■□□□ 1.58
RTKN-207ENST00000472518 WRNQ14191 1432 aaPredicted RBP eCLIP24.9■■□□□ 1.58
RTKN-207ENST00000472518 TOP2BQ02880 1626 aa24.9■■□□□ 1.58
RTKN-207ENST00000472518 ADAMTS12P58397 1594 aa24.71■■□□□ 1.55
RTKN-207ENST00000472518 ERICH3Q5RHP9 1530 aa24.71■■□□□ 1.55
RTKN-207ENST00000472518 GRIN2AQ12879 1464 aa24.7■■□□□ 1.54
RTKN-207ENST00000472518 ERCC6L2Q5T890 1561 aa24.69■■□□□ 1.54
RTKN-207ENST00000472518 FHAD1B1AJZ9 1412 aa24.67■■□□□ 1.54
RTKN-207ENST00000472518 NUP160Q12769 1436 aa24.62■■□□□ 1.53
RTKN-207ENST00000472518 AEBP2Q6ZN18 517 aaPredicted RBP24.59■■□□□ 1.53
RTKN-207ENST00000472518 CEP170Q5SW79 1584 aa24.55■■□□□ 1.52
RTKN-207ENST00000472518 SHROOM2Q13796 1616 aa24.51■■□□□ 1.51
RTKN-207ENST00000472518 KIF27Q86VH2 1401 aa24.42■■□□□ 1.5
RTKN-207ENST00000472518 CUL7Q14999 1698 aa24.4■■□□□ 1.5
RTKN-207ENST00000472518 RUSC2Q8N2Y8 1516 aa24.36■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms