RNA–Protein interactions for RNA: ENST00000472096.1

CALD1-215, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 651 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-215ENST00000472096 CDK11AQ9UQ88 783 aaPredicted RBP24.27■■□□□ 1.48
CALD1-215ENST00000472096 PHLDB1Q86UU1 1377 aa24.27■■□□□ 1.48
CALD1-215ENST00000472096 LOC105371045A0A1W2PR82 267 aa24.25■■□□□ 1.47
CALD1-215ENST00000472096 FANCAO15360 1455 aa24.24■■□□□ 1.47
CALD1-215ENST00000472096 FRMPD1Q5SYB0 1578 aa24.23■■□□□ 1.47
CALD1-215ENST00000472096 RICTORQ6R327 1708 aa24.21■■□□□ 1.47
CALD1-215ENST00000472096 PLCH2O75038 1416 aa24.18■■□□□ 1.46
CALD1-215ENST00000472096 AKNAQ7Z591 1439 aa24.18■■□□□ 1.46
CALD1-215ENST00000472096 PREX2Q70Z35 1606 aa24.17■■□□□ 1.46
CALD1-215ENST00000472096 CDC42BPBQ9Y5S2 1711 aa24.17■■□□□ 1.46
CALD1-215ENST00000472096 CDC42BPAQ5VT25 1732 aa24.15■■□□□ 1.46
CALD1-215ENST00000472096 DMRT2Q9Y5R5 561 aa24.13■■□□□ 1.45
CALD1-215ENST00000472096 ARHGAP5Q13017 1502 aa24.12■■□□□ 1.45
CALD1-215ENST00000472096 DENND4BO75064 1496 aaPredicted RBP24.12■■□□□ 1.45
CALD1-215ENST00000472096 SLC4A1APQ9BWU0 796 aaKnown RBP24.11■■□□□ 1.45
CALD1-215ENST00000472096 ADGRL1O94910 1474 aa24.11■■□□□ 1.45
CALD1-215ENST00000472096 VPS8Q8N3P4 1428 aa24.1■■□□□ 1.45
CALD1-215ENST00000472096 ZMYM4Q5VZL5 1548 aa24.1■■□□□ 1.45
CALD1-215ENST00000472096 EHBP1L1Q8N3D4 1523 aa24.1■■□□□ 1.45
CALD1-215ENST00000472096 RAPGEF3O95398 923 aa24.09■■□□□ 1.45
CALD1-215ENST00000472096 ARHGEF40Q8TER5 1519 aa24.08■■□□□ 1.45
CALD1-215ENST00000472096 TIAM1Q13009 1591 aa24.05■■□□□ 1.44
CALD1-215ENST00000472096 POGZQ7Z3K3 1410 aa24.05■■□□□ 1.44
CALD1-215ENST00000472096 MTUS2Q5JR59 1369 aa24.04■■□□□ 1.44
CALD1-215ENST00000472096 SCAPERQ9BY12 1400 aa24.03■■□□□ 1.44
CALD1-215ENST00000472096 ITSN2Q9NZM3 1697 aa24.03■■□□□ 1.44
CALD1-215ENST00000472096 EFCAB2Q5VUJ9 269 aa24.03■■□□□ 1.44
CALD1-215ENST00000472096 ABCC1P33527 1531 aa24.02■■□□□ 1.44
CALD1-215ENST00000472096 KDM4FA0A1W2PPD8 638 aa24.01■■□□□ 1.43
CALD1-215ENST00000472096 ZFYVE16Q7Z3T8 1539 aa23.99■■□□□ 1.43
CALD1-215ENST00000472096 SUPT6HQ7KZ85 1726 aaKnown RBP23.98■■□□□ 1.43
CALD1-215ENST00000472096 GPATCH8Q9UKJ3 1502 aaKnown RBP23.98■■□□□ 1.43
CALD1-215ENST00000472096 KDM5CP41229 1560 aa23.98■■□□□ 1.43
CALD1-215ENST00000472096 SAMD9LQ8IVG5 1584 aa23.98■■□□□ 1.43
CALD1-215ENST00000472096 RNF216Q9NWF9 866 aaPredicted RBP23.97■■□□□ 1.43
CALD1-215ENST00000472096 ZNF518AQ6AHZ1 1483 aa23.96■■□□□ 1.43
CALD1-215ENST00000472096 MAGI2Q86UL8 1455 aa23.95■■□□□ 1.42
CALD1-215ENST00000472096 HECW2Q9P2P5 1572 aa23.93■■□□□ 1.42
CALD1-215ENST00000472096 MAP3K1Q13233 1512 aa23.93■■□□□ 1.42
CALD1-215ENST00000472096 ARHGEF12Q9NZN5 1544 aa23.92■■□□□ 1.42
CALD1-215ENST00000472096 SIGLEC1Q9BZZ2 1709 aa23.92■■□□□ 1.42
CALD1-215ENST00000472096 YEATS2Q9ULM3 1422 aa23.92■■□□□ 1.42
CALD1-215ENST00000472096 CCNB3Q8WWL7 1395 aa23.91■■□□□ 1.42
CALD1-215ENST00000472096 BCORL1Q5H9F3 1711 aa23.91■■□□□ 1.42
CALD1-215ENST00000472096 SYCP2Q9BX26 1530 aa23.9■■□□□ 1.42
CALD1-215ENST00000472096 NCOA2Q15596 1464 aa23.89■■□□□ 1.42
CALD1-215ENST00000472096 LRRC9Q6ZRR7 1453 aa23.89■■□□□ 1.42
CALD1-215ENST00000472096 ADAMTSL3P82987 1691 aa23.89■■□□□ 1.41
CALD1-215ENST00000472096 TRAPPC8Q9Y2L5 1435 aa23.86■■□□□ 1.41
CALD1-215ENST00000472096 ABCA6Q8N139 1617 aa23.86■■□□□ 1.41
CALD1-215ENST00000472096 DIP2CQ9Y2E4 1556 aa23.85■■□□□ 1.41
CALD1-215ENST00000472096 PLEKHH2Q8IVE3 1493 aa23.84■■□□□ 1.41
CALD1-215ENST00000472096 KIDINS220Q9ULH0 1771 aa23.83■■□□□ 1.41
CALD1-215ENST00000472096 MLH3Q9UHC1 1453 aa23.82■■□□□ 1.4
CALD1-215ENST00000472096 AFAP1Q8N556 730 aa23.82■■□□□ 1.4
CALD1-215ENST00000472096 CFDP1Q9UEE9 299 aaPredicted RBP23.82■■□□□ 1.4
CALD1-215ENST00000472096 MADDQ8WXG6 1647 aa23.81■■□□□ 1.4
CALD1-215ENST00000472096 ZNF777Q9ULD5 760 aaPredicted RBP23.81■■□□□ 1.4
CALD1-215ENST00000472096 C9orf84Q5VXU9 1444 aa23.81■■□□□ 1.4
CALD1-215ENST00000472096 KIAA1107Q9UPP5 1409 aa23.81■■□□□ 1.4
CALD1-215ENST00000472096 ATP10AO60312 1499 aa23.81■■□□□ 1.4
CALD1-215ENST00000472096 REREQ9P2R6 1566 aa23.79■■□□□ 1.4
CALD1-215ENST00000472096 INO80Q9ULG1 1556 aaPredicted RBP23.78■■□□□ 1.4
CALD1-215ENST00000472096 HOXD11P31277 338 aaPredicted RBP23.77■■□□□ 1.4
CALD1-215ENST00000472096 ARID4BQ4LE39 1312 aaPredicted RBP23.76■■□□□ 1.39
CALD1-215ENST00000472096 KANK4Q5T7N3 995 aaPredicted RBP23.75■■□□□ 1.39
CALD1-215ENST00000472096 RIMS1Q86UR5 1692 aaKnown RBP23.75■■□□□ 1.39
CALD1-215ENST00000472096 FER1L4A9Z1Z3 1794 aa23.75■■□□□ 1.39
CALD1-215ENST00000472096 CAMSAP2Q08AD1 1489 aa23.75■■□□□ 1.39
CALD1-215ENST00000472096 ATP7AQ04656 1500 aa23.74■■□□□ 1.39
CALD1-215ENST00000472096 HNRNPMP52272 730 aaKnown RBP eCLIP23.72■■□□□ 1.39
CALD1-215ENST00000472096 MBD5Q9P267 1494 aa23.72■■□□□ 1.39
CALD1-215ENST00000472096 ZNF644Q9H582 1327 aaPredicted RBP23.71■■□□□ 1.39
CALD1-215ENST00000472096 MYT1LQ9UL68 1186 aa23.7■■□□□ 1.38
CALD1-215ENST00000472096 PTPRMP28827 1452 aa23.69■■□□□ 1.38
CALD1-215ENST00000472096 APLP2Q06481 763 aa23.69■■□□□ 1.38
CALD1-215ENST00000472096 MYOM3Q5VTT5 1437 aa23.67■■□□□ 1.38
CALD1-215ENST00000472096 ARHGEF5Q12774 1597 aa23.67■■□□□ 1.38
CALD1-215ENST00000472096 AGLP35573 1532 aa23.67■■□□□ 1.38
CALD1-215ENST00000472096 ADGBQ8N7X0 1667 aa23.67■■□□□ 1.38
CALD1-215ENST00000472096 SPAG9O60271 1321 aaKnown RBP23.66■■□□□ 1.38
CALD1-215ENST00000472096 CCDC141Q6ZP82 1450 aa23.66■■□□□ 1.38
CALD1-215ENST00000472096 PLXNC1O60486 1568 aa23.65■■□□□ 1.38
CALD1-215ENST00000472096 MIA2Q96PC5 1412 aa23.63■■□□□ 1.37
CALD1-215ENST00000472096 MLECQ14165 292 aa23.59■■□□□ 1.37
CALD1-215ENST00000472096 PTPN23Q9H3S7 1636 aa23.59■■□□□ 1.37
CALD1-215ENST00000472096 RTEL1-TNFRSF6BF6WH68 1400 aa23.59■■□□□ 1.37
CALD1-215ENST00000472096 A2MP01023 1474 aa23.57■■□□□ 1.36
CALD1-215ENST00000472096 CROCC2H7BZ55 1655 aa23.57■■□□□ 1.36
CALD1-215ENST00000472096 MAST1Q9Y2H9 1570 aa23.57■■□□□ 1.36
CALD1-215ENST00000472096 RSPH4AQ5TD94 716 aa23.53■■□□□ 1.36
CALD1-215ENST00000472096 FGD6Q6ZV73 1430 aa23.52■■□□□ 1.36
CALD1-215ENST00000472096 TCOF1Q13428 1488 aaKnown RBP23.5■■□□□ 1.35
CALD1-215ENST00000472096 C3P01024 1663 aa23.5■■□□□ 1.35
CALD1-215ENST00000472096 DNMT1P26358 1616 aaKnown RBP23.49■■□□□ 1.35
CALD1-215ENST00000472096 MROH2AA6NES4 1674 aa23.49■■□□□ 1.35
CALD1-215ENST00000472096 CLTCQ00610 1675 aaKnown RBP23.45■■□□□ 1.34
CALD1-215ENST00000472096 SHANK2Q9UPX8 1470 aa23.45■■□□□ 1.34
CALD1-215ENST00000472096 PREX1Q8TCU6 1659 aa23.44■■□□□ 1.34
CALD1-215ENST00000472096 CNTLNQ9NXG0 1405 aa23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms