RNA–Protein interactions for RNA: ENST00000471880.5

SSR4-208, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 5

Gene SSR4, Length 785 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-208ENST00000471880 ZMYM4Q5VZL5 1548 aa23.67■■□□□ 1.38
SSR4-208ENST00000471880 ARHGEF40Q8TER5 1519 aa23.67■■□□□ 1.38
SSR4-208ENST00000471880 PREX2Q70Z35 1606 aa23.66■■□□□ 1.38
SSR4-208ENST00000471880 ARHGAP5Q13017 1502 aa23.63■■□□□ 1.37
SSR4-208ENST00000471880 SCAPERQ9BY12 1400 aa23.62■■□□□ 1.37
SSR4-208ENST00000471880 ADAMTSL3P82987 1691 aa23.61■■□□□ 1.37
SSR4-208ENST00000471880 YEATS2Q9ULM3 1422 aa23.61■■□□□ 1.37
SSR4-208ENST00000471880 POGZQ7Z3K3 1410 aa23.6■■□□□ 1.37
SSR4-208ENST00000471880 EFCAB2Q5VUJ9 269 aa23.59■■□□□ 1.37
SSR4-208ENST00000471880 BCORL1Q5H9F3 1711 aa23.59■■□□□ 1.37
SSR4-208ENST00000471880 ZFYVE16Q7Z3T8 1539 aa23.57■■□□□ 1.36
SSR4-208ENST00000471880 ARHGEF12Q9NZN5 1544 aa23.55■■□□□ 1.36
SSR4-208ENST00000471880 ITSN2Q9NZM3 1697 aa23.55■■□□□ 1.36
SSR4-208ENST00000471880 MTUS2Q5JR59 1369 aa23.54■■□□□ 1.36
SSR4-208ENST00000471880 ABCC1P33527 1531 aa23.54■■□□□ 1.36
SSR4-208ENST00000471880 KDM5CP41229 1560 aa23.52■■□□□ 1.36
SSR4-208ENST00000471880 MADDQ8WXG6 1647 aa23.52■■□□□ 1.36
SSR4-208ENST00000471880 MYT1LQ9UL68 1186 aa23.51■■□□□ 1.35
SSR4-208ENST00000471880 SAMD9LQ8IVG5 1584 aa23.51■■□□□ 1.35
SSR4-208ENST00000471880 ARID4BQ4LE39 1312 aaPredicted RBP23.51■■□□□ 1.35
SSR4-208ENST00000471880 GPATCH8Q9UKJ3 1502 aaKnown RBP23.5■■□□□ 1.35
SSR4-208ENST00000471880 MAGI2Q86UL8 1455 aa23.49■■□□□ 1.35
SSR4-208ENST00000471880 ZNF777Q9ULD5 760 aaPredicted RBP23.49■■□□□ 1.35
SSR4-208ENST00000471880 TRAPPC8Q9Y2L5 1435 aa23.48■■□□□ 1.35
SSR4-208ENST00000471880 AFAP1Q8N556 730 aa23.47■■□□□ 1.35
SSR4-208ENST00000471880 ZNF518AQ6AHZ1 1483 aa23.47■■□□□ 1.35
SSR4-208ENST00000471880 TIAM1Q13009 1591 aa23.46■■□□□ 1.35
SSR4-208ENST00000471880 ABCA6Q8N139 1617 aa23.46■■□□□ 1.35
SSR4-208ENST00000471880 EHBP1L1Q8N3D4 1523 aa23.46■■□□□ 1.35
SSR4-208ENST00000471880 HECW2Q9P2P5 1572 aa23.46■■□□□ 1.35
SSR4-208ENST00000471880 RIMS1Q86UR5 1692 aaKnown RBP23.45■■□□□ 1.34
SSR4-208ENST00000471880 VPS8Q8N3P4 1428 aa23.45■■□□□ 1.34
SSR4-208ENST00000471880 DIP2CQ9Y2E4 1556 aa23.44■■□□□ 1.34
SSR4-208ENST00000471880 CCNB3Q8WWL7 1395 aa23.43■■□□□ 1.34
SSR4-208ENST00000471880 KIDINS220Q9ULH0 1771 aa23.43■■□□□ 1.34
SSR4-208ENST00000471880 PTPRMP28827 1452 aa23.43■■□□□ 1.34
SSR4-208ENST00000471880 SYCP2Q9BX26 1530 aa23.42■■□□□ 1.34
SSR4-208ENST00000471880 ATP10AO60312 1499 aa23.41■■□□□ 1.34
SSR4-208ENST00000471880 CFDP1Q9UEE9 299 aaPredicted RBP23.39■■□□□ 1.33
SSR4-208ENST00000471880 FER1L4A9Z1Z3 1794 aa23.39■■□□□ 1.33
SSR4-208ENST00000471880 C9orf84Q5VXU9 1444 aa23.38■■□□□ 1.33
SSR4-208ENST00000471880 MLH3Q9UHC1 1453 aa23.37■■□□□ 1.33
SSR4-208ENST00000471880 SUPT6HQ7KZ85 1726 aaKnown RBP23.36■■□□□ 1.33
SSR4-208ENST00000471880 APLP2Q06481 763 aa23.34■■□□□ 1.33
SSR4-208ENST00000471880 REREQ9P2R6 1566 aa23.34■■□□□ 1.33
SSR4-208ENST00000471880 NCOA2Q15596 1464 aa23.33■■□□□ 1.33
SSR4-208ENST00000471880 MLECQ14165 292 aa23.33■■□□□ 1.33
SSR4-208ENST00000471880 ZNF644Q9H582 1327 aaPredicted RBP23.32■■□□□ 1.32
SSR4-208ENST00000471880 HNRNPMP52272 730 aaKnown RBP eCLIP23.31■■□□□ 1.32
SSR4-208ENST00000471880 INO80Q9ULG1 1556 aaPredicted RBP23.31■■□□□ 1.32
SSR4-208ENST00000471880 PLPPR3Q6T4P5 718 aa23.29■■□□□ 1.32
SSR4-208ENST00000471880 KIAA1107Q9UPP5 1409 aa23.29■■□□□ 1.32
SSR4-208ENST00000471880 LRRC9Q6ZRR7 1453 aa23.29■■□□□ 1.32
SSR4-208ENST00000471880 PLEKHH2Q8IVE3 1493 aa23.26■■□□□ 1.31
SSR4-208ENST00000471880 ATP7AQ04656 1500 aa23.26■■□□□ 1.31
SSR4-208ENST00000471880 MBD5Q9P267 1494 aa23.25■■□□□ 1.31
SSR4-208ENST00000471880 MAP3K1Q13233 1512 aa23.25■■□□□ 1.31
SSR4-208ENST00000471880 KANK4Q5T7N3 995 aaPredicted RBP23.25■■□□□ 1.31
SSR4-208ENST00000471880 AGLP35573 1532 aa23.23■■□□□ 1.31
SSR4-208ENST00000471880 SPAG9O60271 1321 aaKnown RBP23.23■■□□□ 1.31
SSR4-208ENST00000471880 CAMSAP2Q08AD1 1489 aa23.21■■□□□ 1.31
SSR4-208ENST00000471880 LMTK3Q96Q04 1460 aa23.2■■□□□ 1.3
SSR4-208ENST00000471880 ADGBQ8N7X0 1667 aa23.19■■□□□ 1.3
SSR4-208ENST00000471880 PLXNC1O60486 1568 aa23.19■■□□□ 1.3
SSR4-208ENST00000471880 C3P01024 1663 aa23.17■■□□□ 1.3
SSR4-208ENST00000471880 CEBPAP49715 358 aaPredicted RBP23.13■■□□□ 1.29
SSR4-208ENST00000471880 A2MP01023 1474 aa23.12■■□□□ 1.29
SSR4-208ENST00000471880 ESF1Q9H501 851 aaKnown RBP23.12■■□□□ 1.29
SSR4-208ENST00000471880 ARHGEF5Q12774 1597 aa23.11■■□□□ 1.29
SSR4-208ENST00000471880 CCDC141Q6ZP82 1450 aa23.11■■□□□ 1.29
SSR4-208ENST00000471880 PREX1Q8TCU6 1659 aa23.09■■□□□ 1.29
SSR4-208ENST00000471880 MYOM3Q5VTT5 1437 aa23.08■■□□□ 1.28
SSR4-208ENST00000471880 SETD1BQ9UPS6 1966 aaKnown RBP23.07■■□□□ 1.28
SSR4-208ENST00000471880 CLTCQ00610 1675 aaKnown RBP23.07■■□□□ 1.28
SSR4-208ENST00000471880 RTEL1-TNFRSF6BF6WH68 1400 aa23.06■■□□□ 1.28
SSR4-208ENST00000471880 MROH2AA6NES4 1674 aa23.06■■□□□ 1.28
SSR4-208ENST00000471880 HSPA2P54652 639 aa23.05■■□□□ 1.28
SSR4-208ENST00000471880 TSPY4P0CV99 314 aa23.03■■□□□ 1.28
SSR4-208ENST00000471880 TSPY10P0CW01 314 aa23.03■■□□□ 1.28
SSR4-208ENST00000471880 RSPH4AQ5TD94 716 aa23.01■■□□□ 1.27
SSR4-208ENST00000471880 MAST1Q9Y2H9 1570 aa23.01■■□□□ 1.27
SSR4-208ENST00000471880 PTPN23Q9H3S7 1636 aa23■■□□□ 1.27
SSR4-208ENST00000471880 MIA2Q96PC5 1412 aa23■■□□□ 1.27
SSR4-208ENST00000471880 CROCC2H7BZ55 1655 aa23■■□□□ 1.27
SSR4-208ENST00000471880 GGT6Q6P531 493 aa22.99■■□□□ 1.27
SSR4-208ENST00000471880 DHX29Q7Z478 1369 aaKnown RBP22.97■■□□□ 1.27
SSR4-208ENST00000471880 CNTLNQ9NXG0 1405 aa22.97■■□□□ 1.27
SSR4-208ENST00000471880 STRCQ7RTU9 1775 aa22.95■■□□□ 1.26
SSR4-208ENST00000471880 PPARGC1BQ86YN6 1023 aaKnown RBP22.94■■□□□ 1.26
SSR4-208ENST00000471880 FGD6Q6ZV73 1430 aa22.92■■□□□ 1.26
SSR4-208ENST00000471880 ZMYM3Q14202 1370 aa22.92■■□□□ 1.26
SSR4-208ENST00000471880 DNMT1P26358 1616 aaKnown RBP22.91■■□□□ 1.26
SSR4-208ENST00000471880 KIF3BO15066 747 aa22.91■■□□□ 1.26
SSR4-208ENST00000471880 TCOF1Q13428 1488 aaKnown RBP22.91■■□□□ 1.26
SSR4-208ENST00000471880 ABCC5O15440 1437 aa22.91■■□□□ 1.26
SSR4-208ENST00000471880 FAM50AQ14320 339 aaKnown RBP22.9■■□□□ 1.26
SSR4-208ENST00000471880 UHRF1BP1Q6BDS2 1440 aa22.9■■□□□ 1.26
SSR4-208ENST00000471880 RNF17Q9BXT8 1623 aaKnown RBP22.89■■□□□ 1.25
SSR4-208ENST00000471880 MROH1Q8NDA8 1641 aa22.88■■□□□ 1.25
SSR4-208ENST00000471880 MYO3AQ8NEV4 1616 aa22.87■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms