RNA–Protein interactions for RNA: ENST00000470977.5

SNHG12-205, Transcript of small nucleolar RNA host gene 12, humanhuman

TSL 1 (best)

Gene SNHG12, Length 1,098 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG12-205ENST00000470977 STRCQ7RTU9 1775 aa22.22■■□□□ 1.15
SNHG12-205ENST00000470977 CFAP74Q9C0B2 1584 aa22.22■■□□□ 1.15
SNHG12-205ENST00000470977 ARHGEF12Q9NZN5 1544 aa22.21■■□□□ 1.15
SNHG12-205ENST00000470977 SAMD9Q5K651 1589 aa22.21■■□□□ 1.15
SNHG12-205ENST00000470977 HECW1Q76N89 1606 aa22.2■■□□□ 1.15
SNHG12-205ENST00000470977 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.2■■□□□ 1.14
SNHG12-205ENST00000470977 ATP10AO60312 1499 aa22.18■■□□□ 1.14
SNHG12-205ENST00000470977 UHRF1BP1Q6BDS2 1440 aa22.18■■□□□ 1.14
SNHG12-205ENST00000470977 PTPRTO14522 1441 aa22.17■■□□□ 1.14
SNHG12-205ENST00000470977 SCAPERQ9BY12 1400 aa22.17■■□□□ 1.14
SNHG12-205ENST00000470977 C9orf84Q5VXU9 1444 aa22.14■■□□□ 1.14
SNHG12-205ENST00000470977 LTBP4Q8N2S1 1624 aa22.11■■□□□ 1.13
SNHG12-205ENST00000470977 RANGAP1P46060 587 aaPredicted RBP22.11■■□□□ 1.13
SNHG12-205ENST00000470977 SETD1BQ9UPS6 1966 aaKnown RBP22.1■■□□□ 1.13
SNHG12-205ENST00000470977 PLCH2O75038 1416 aa22.09■■□□□ 1.13
SNHG12-205ENST00000470977 IQSEC2Q5JU85 1478 aa22.09■■□□□ 1.13
SNHG12-205ENST00000470977 EFCAB2Q5VUJ9 269 aa22.03■■□□□ 1.12
SNHG12-205ENST00000470977 CSRNP3Q8WYN3 585 aa22.01■■□□□ 1.11
SNHG12-205ENST00000470977 UBAP1LF5GYI3 381 aa22■■□□□ 1.11
SNHG12-205ENST00000470977 AFAP1Q8N556 730 aa21.99■■□□□ 1.11
SNHG12-205ENST00000470977 NCOA1Q15788 1441 aa21.98■■□□□ 1.11
SNHG12-205ENST00000470977 TRAPPC8Q9Y2L5 1435 aa21.98■■□□□ 1.11
SNHG12-205ENST00000470977 ESF1Q9H501 851 aaKnown RBP21.97■■□□□ 1.11
SNHG12-205ENST00000470977 MYT1LQ9UL68 1186 aa21.97■■□□□ 1.11
SNHG12-205ENST00000470977 ZNF518AQ6AHZ1 1483 aa21.96■■□□□ 1.11
SNHG12-205ENST00000470977 CDK13Q14004 1512 aaKnown RBP21.96■■□□□ 1.11
SNHG12-205ENST00000470977 C3P01024 1663 aa21.93■■□□□ 1.1
SNHG12-205ENST00000470977 ZNF335Q9H4Z2 1342 aaPredicted RBP21.92■■□□□ 1.1
SNHG12-205ENST00000470977 KDM5CP41229 1560 aa21.9■■□□□ 1.1
SNHG12-205ENST00000470977 DIP2CQ9Y2E4 1556 aa21.89■■□□□ 1.09
SNHG12-205ENST00000470977 NCKAP5LQ9HCH0 1330 aa21.88■■□□□ 1.09
SNHG12-205ENST00000470977 REREQ9P2R6 1566 aa21.88■■□□□ 1.09
SNHG12-205ENST00000470977 CAMSAP1Q5T5Y3 1602 aa21.86■■□□□ 1.09
SNHG12-205ENST00000470977 ATP1B4Q9UN42 357 aaPredicted RBP21.85■■□□□ 1.09
SNHG12-205ENST00000470977 MYO5CQ9NQX4 1742 aa21.85■■□□□ 1.09
SNHG12-205ENST00000470977 AGLP35573 1532 aa21.85■■□□□ 1.09
SNHG12-205ENST00000470977 MLH3Q9UHC1 1453 aa21.84■■□□□ 1.09
SNHG12-205ENST00000470977 CNTLNQ9NXG0 1405 aa21.84■■□□□ 1.09
SNHG12-205ENST00000470977 CDK11AQ9UQ88 783 aaPredicted RBP21.84■■□□□ 1.09
SNHG12-205ENST00000470977 ARHGAP5Q13017 1502 aa21.84■■□□□ 1.09
SNHG12-205ENST00000470977 ABCA6Q8N139 1617 aa21.82■■□□□ 1.08
SNHG12-205ENST00000470977 HSPA1LP34931 641 aa21.82■■□□□ 1.08
SNHG12-205ENST00000470977 NPATQ14207 1427 aa21.81■■□□□ 1.08
SNHG12-205ENST00000470977 PKD2Q13563 968 aa21.79■■□□□ 1.08
SNHG12-205ENST00000470977 MED1Q15648 1581 aaPredicted RBP21.78■■□□□ 1.08
SNHG12-205ENST00000470977 KIF14Q15058 1648 aa21.78■■□□□ 1.08
SNHG12-205ENST00000470977 SCAF1Q9H7N4 1312 aaKnown RBP21.78■■□□□ 1.08
SNHG12-205ENST00000470977 ZMYM3Q14202 1370 aa21.76■■□□□ 1.07
SNHG12-205ENST00000470977 TROQ12816 1431 aaPredicted RBP21.75■■□□□ 1.07
SNHG12-205ENST00000470977 PIP4K2BP78356 416 aa21.75■■□□□ 1.07
SNHG12-205ENST00000470977 PLA2R1Q13018 1463 aa21.73■■□□□ 1.07
SNHG12-205ENST00000470977 PPP6R1Q9UPN7 881 aa21.72■■□□□ 1.07
SNHG12-205ENST00000470977 TCOF1Q13428 1488 aaKnown RBP21.71■■□□□ 1.07
SNHG12-205ENST00000470977 PHF23Q9BUL5 403 aaPredicted RBP21.71■■□□□ 1.07
SNHG12-205ENST00000470977 CLIP1P30622 1438 aa21.71■■□□□ 1.07
SNHG12-205ENST00000470977 FMN1Q68DA7 1419 aa21.71■■□□□ 1.07
SNHG12-205ENST00000470977 TOM1O60784 492 aa21.7■■□□□ 1.06
SNHG12-205ENST00000470977 EEA1Q15075 1411 aa21.7■■□□□ 1.06
SNHG12-205ENST00000470977 ABCC1P33527 1531 aa21.67■■□□□ 1.06
SNHG12-205ENST00000470977 MROH2AA6NES4 1674 aa21.66■■□□□ 1.06
SNHG12-205ENST00000470977 KIDINS220Q9ULH0 1771 aa21.66■■□□□ 1.06
SNHG12-205ENST00000470977 CDC42BPBQ9Y5S2 1711 aa21.65■■□□□ 1.06
SNHG12-205ENST00000470977 PTPRKQ15262 1439 aa21.63■■□□□ 1.05
SNHG12-205ENST00000470977 CEP170BQ9Y4F5 1589 aaPredicted RBP21.63■■□□□ 1.05
SNHG12-205ENST00000470977 MYO3AQ8NEV4 1616 aa21.62■■□□□ 1.05
SNHG12-205ENST00000470977 ZNF142P52746 1687 aaPredicted RBP21.62■■□□□ 1.05
SNHG12-205ENST00000470977 ITSN2Q9NZM3 1697 aa21.6■■□□□ 1.05
SNHG12-205ENST00000470977 PREX2Q70Z35 1606 aa21.58■■□□□ 1.04
SNHG12-205ENST00000470977 SPAG9O60271 1321 aaKnown RBP21.57■■□□□ 1.04
SNHG12-205ENST00000470977 CPS1P31327 1500 aa21.57■■□□□ 1.04
SNHG12-205ENST00000470977 ARHGAP35Q9NRY4 1499 aa21.57■■□□□ 1.04
SNHG12-205ENST00000470977 GGT6Q6P531 493 aa21.56■■□□□ 1.04
SNHG12-205ENST00000470977 SHANK2Q9UPX8 1470 aa21.56■■□□□ 1.04
SNHG12-205ENST00000470977 SAMD9LQ8IVG5 1584 aa21.56■■□□□ 1.04
SNHG12-205ENST00000470977 SUPT6HQ7KZ85 1726 aaKnown RBP21.55■■□□□ 1.04
SNHG12-205ENST00000470977 ZNF777Q9ULD5 760 aaPredicted RBP21.55■■□□□ 1.04
SNHG12-205ENST00000470977 CLTCQ00610 1675 aaKnown RBP21.55■■□□□ 1.04
SNHG12-205ENST00000470977 UBTFP17480 764 aaKnown RBP21.54■■□□□ 1.04
SNHG12-205ENST00000470977 EHMT2Q96KQ7 1210 aa21.53■■□□□ 1.04
SNHG12-205ENST00000470977 A2ML1A8K2U0 1454 aa21.52■■□□□ 1.04
SNHG12-205ENST00000470977 HNRNPMP52272 730 aaKnown RBP eCLIP21.52■■□□□ 1.04
SNHG12-205ENST00000470977 DNMT1P26358 1616 aaKnown RBP21.49■■□□□ 1.03
SNHG12-205ENST00000470977 SENP3Q9H4L4 574 aaPredicted RBP21.49■■□□□ 1.03
SNHG12-205ENST00000470977 A2MP01023 1474 aa21.49■■□□□ 1.03
SNHG12-205ENST00000470977 LRRIQ1Q96JM4 1722 aa21.48■■□□□ 1.03
SNHG12-205ENST00000470977 PLXNC1O60486 1568 aa21.48■■□□□ 1.03
SNHG12-205ENST00000470977 SYCP2Q9BX26 1530 aa21.47■■□□□ 1.03
SNHG12-205ENST00000470977 NEURL4Q96JN8 1562 aa21.46■■□□□ 1.03
SNHG12-205ENST00000470977 RGS17Q9UGC6 210 aaPredicted RBP21.46■■□□□ 1.03
SNHG12-205ENST00000470977 ALKQ9UM73 1620 aa21.46■■□□□ 1.03
SNHG12-205ENST00000470977 ATP7AQ04656 1500 aa21.45■■□□□ 1.02
SNHG12-205ENST00000470977 ANKLE2Q86XL3 938 aa21.45■■□□□ 1.02
SNHG12-205ENST00000470977 CDC42BPAQ5VT25 1732 aa21.44■■□□□ 1.02
SNHG12-205ENST00000470977 CCDC18Q5T9S5 1454 aa21.42■■□□□ 1.02
SNHG12-205ENST00000470977 FBXO31Q5XUX0 539 aaPredicted RBP21.42■■□□□ 1.02
SNHG12-205ENST00000470977 VWDEQ8N2E2 1590 aa21.42■■□□□ 1.02
SNHG12-205ENST00000470977 KIAA1107Q9UPP5 1409 aa21.41■■□□□ 1.02
SNHG12-205ENST00000470977 TNRQ92752 1358 aa21.41■■□□□ 1.02
SNHG12-205ENST00000470977 GPATCH8Q9UKJ3 1502 aaKnown RBP21.4■■□□□ 1.02
SNHG12-205ENST00000470977 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.4■■□□□ 1.021e-7■■□□□ 13.9
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms