RNA–Protein interactions for RNA: ENST00000470338.1

TOP3B-215, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 624 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-215ENST00000470338 ADGRL1O94910 1474 aa22.55■■□□□ 1.2
TOP3B-215ENST00000470338 PREX2Q70Z35 1606 aa22.55■■□□□ 1.2
TOP3B-215ENST00000470338 ARHGAP5Q13017 1502 aa22.55■■□□□ 1.2
TOP3B-215ENST00000470338 SCAPERQ9BY12 1400 aa22.54■■□□□ 1.2
TOP3B-215ENST00000470338 MTUS2Q5JR59 1369 aa22.52■■□□□ 1.2
TOP3B-215ENST00000470338 ZMYM4Q5VZL5 1548 aa22.5■■□□□ 1.19
TOP3B-215ENST00000470338 POGZQ7Z3K3 1410 aa22.48■■□□□ 1.19
TOP3B-215ENST00000470338 EHBP1L1Q8N3D4 1523 aa22.48■■□□□ 1.19
TOP3B-215ENST00000470338 GPATCH8Q9UKJ3 1502 aaKnown RBP22.47■■□□□ 1.19
TOP3B-215ENST00000470338 TIAM1Q13009 1591 aa22.46■■□□□ 1.19
TOP3B-215ENST00000470338 MAGI2Q86UL8 1455 aa22.46■■□□□ 1.19
TOP3B-215ENST00000470338 ARHGEF40Q8TER5 1519 aa22.45■■□□□ 1.18
TOP3B-215ENST00000470338 ABCC1P33527 1531 aa22.42■■□□□ 1.18
TOP3B-215ENST00000470338 ZNF518AQ6AHZ1 1483 aa22.42■■□□□ 1.18
TOP3B-215ENST00000470338 CCNB3Q8WWL7 1395 aa22.42■■□□□ 1.18
TOP3B-215ENST00000470338 MAP3K1Q13233 1512 aa22.41■■□□□ 1.18
TOP3B-215ENST00000470338 ITSN2Q9NZM3 1697 aa22.41■■□□□ 1.18
TOP3B-215ENST00000470338 KDM5CP41229 1560 aa22.41■■□□□ 1.18
TOP3B-215ENST00000470338 ZFYVE16Q7Z3T8 1539 aa22.41■■□□□ 1.18
TOP3B-215ENST00000470338 ARHGEF12Q9NZN5 1544 aa22.41■■□□□ 1.18
TOP3B-215ENST00000470338 SUPT6HQ7KZ85 1726 aaKnown RBP22.4■■□□□ 1.18
TOP3B-215ENST00000470338 YEATS2Q9ULM3 1422 aa22.4■■□□□ 1.18
TOP3B-215ENST00000470338 SAMD9LQ8IVG5 1584 aa22.39■■□□□ 1.18
TOP3B-215ENST00000470338 AFAP1Q8N556 730 aa22.39■■□□□ 1.17
TOP3B-215ENST00000470338 CFDP1Q9UEE9 299 aaPredicted RBP22.38■■□□□ 1.17
TOP3B-215ENST00000470338 LRRC9Q6ZRR7 1453 aa22.37■■□□□ 1.17
TOP3B-215ENST00000470338 ZNF777Q9ULD5 760 aaPredicted RBP22.36■■□□□ 1.17
TOP3B-215ENST00000470338 TRAPPC8Q9Y2L5 1435 aa22.36■■□□□ 1.17
TOP3B-215ENST00000470338 NCOA2Q15596 1464 aa22.35■■□□□ 1.17
TOP3B-215ENST00000470338 BCORL1Q5H9F3 1711 aa22.34■■□□□ 1.17
TOP3B-215ENST00000470338 HECW2Q9P2P5 1572 aa22.33■■□□□ 1.17
TOP3B-215ENST00000470338 ADAMTSL3P82987 1691 aa22.33■■□□□ 1.17
TOP3B-215ENST00000470338 SIGLEC1Q9BZZ2 1709 aa22.33■■□□□ 1.17
TOP3B-215ENST00000470338 MLH3Q9UHC1 1453 aa22.33■■□□□ 1.16
TOP3B-215ENST00000470338 KIAA1107Q9UPP5 1409 aa22.32■■□□□ 1.16
TOP3B-215ENST00000470338 KANK4Q5T7N3 995 aaPredicted RBP22.32■■□□□ 1.16
TOP3B-215ENST00000470338 ATP10AO60312 1499 aa22.32■■□□□ 1.16
TOP3B-215ENST00000470338 PLEKHH2Q8IVE3 1493 aa22.32■■□□□ 1.16
TOP3B-215ENST00000470338 SYCP2Q9BX26 1530 aa22.31■■□□□ 1.16
TOP3B-215ENST00000470338 ARID4BQ4LE39 1312 aaPredicted RBP22.31■■□□□ 1.16
TOP3B-215ENST00000470338 HNRNPMP52272 730 aaKnown RBP eCLIP22.29■■□□□ 1.16
TOP3B-215ENST00000470338 KIDINS220Q9ULH0 1771 aa22.28■■□□□ 1.16
TOP3B-215ENST00000470338 C9orf84Q5VXU9 1444 aa22.28■■□□□ 1.16
TOP3B-215ENST00000470338 DIP2CQ9Y2E4 1556 aa22.27■■□□□ 1.16
TOP3B-215ENST00000470338 ZNF644Q9H582 1327 aaPredicted RBP22.27■■□□□ 1.16
TOP3B-215ENST00000470338 ABCA6Q8N139 1617 aa22.26■■□□□ 1.15
TOP3B-215ENST00000470338 APLP2Q06481 763 aa22.25■■□□□ 1.15
TOP3B-215ENST00000470338 MYT1LQ9UL68 1186 aa22.25■■□□□ 1.15
TOP3B-215ENST00000470338 REREQ9P2R6 1566 aa22.24■■□□□ 1.15
TOP3B-215ENST00000470338 MBD5Q9P267 1494 aa22.23■■□□□ 1.15
TOP3B-215ENST00000470338 MADDQ8WXG6 1647 aa22.23■■□□□ 1.15
TOP3B-215ENST00000470338 SPAG9O60271 1321 aaKnown RBP22.21■■□□□ 1.15
TOP3B-215ENST00000470338 PTPRMP28827 1452 aa22.19■■□□□ 1.14
TOP3B-215ENST00000470338 CAMSAP2Q08AD1 1489 aa22.19■■□□□ 1.14
TOP3B-215ENST00000470338 INO80Q9ULG1 1556 aaPredicted RBP22.19■■□□□ 1.14
TOP3B-215ENST00000470338 ATP7AQ04656 1500 aa22.18■■□□□ 1.14
TOP3B-215ENST00000470338 RIMS1Q86UR5 1692 aaKnown RBP22.17■■□□□ 1.14
TOP3B-215ENST00000470338 AGLP35573 1532 aa22.16■■□□□ 1.14
TOP3B-215ENST00000470338 MYOM3Q5VTT5 1437 aa22.16■■□□□ 1.14
TOP3B-215ENST00000470338 RSPH4AQ5TD94 716 aa22.15■■□□□ 1.14
TOP3B-215ENST00000470338 FER1L4A9Z1Z3 1794 aa22.15■■□□□ 1.14
TOP3B-215ENST00000470338 MIA2Q96PC5 1412 aa22.14■■□□□ 1.14
TOP3B-215ENST00000470338 MLECQ14165 292 aa22.14■■□□□ 1.13
TOP3B-215ENST00000470338 ARHGEF5Q12774 1597 aa22.13■■□□□ 1.13
TOP3B-215ENST00000470338 RTEL1-TNFRSF6BF6WH68 1400 aa22.13■■□□□ 1.13
TOP3B-215ENST00000470338 CCDC141Q6ZP82 1450 aa22.12■■□□□ 1.13
TOP3B-215ENST00000470338 ADGBQ8N7X0 1667 aa22.11■■□□□ 1.13
TOP3B-215ENST00000470338 PLXNC1O60486 1568 aa22.08■■□□□ 1.12
TOP3B-215ENST00000470338 A2MP01023 1474 aa22.07■■□□□ 1.12
TOP3B-215ENST00000470338 PTPN23Q9H3S7 1636 aa22.04■■□□□ 1.12
TOP3B-215ENST00000470338 TSPY4P0CV99 314 aa22.03■■□□□ 1.12
TOP3B-215ENST00000470338 TSPY10P0CW01 314 aa22.03■■□□□ 1.12
TOP3B-215ENST00000470338 MAST1Q9Y2H9 1570 aa22.02■■□□□ 1.12
TOP3B-215ENST00000470338 FGD6Q6ZV73 1430 aa22.01■■□□□ 1.11
TOP3B-215ENST00000470338 DHX29Q7Z478 1369 aaKnown RBP22■■□□□ 1.11
TOP3B-215ENST00000470338 TCOF1Q13428 1488 aaKnown RBP22■■□□□ 1.11
TOP3B-215ENST00000470338 SETD1BQ9UPS6 1966 aaKnown RBP21.96■■□□□ 1.11
TOP3B-215ENST00000470338 CROCC2H7BZ55 1655 aa21.95■■□□□ 1.1
TOP3B-215ENST00000470338 C3P01024 1663 aa21.95■■□□□ 1.1
TOP3B-215ENST00000470338 CEBPAP49715 358 aaPredicted RBP21.95■■□□□ 1.1
TOP3B-215ENST00000470338 PLPPR3Q6T4P5 718 aa21.95■■□□□ 1.1
TOP3B-215ENST00000470338 ESF1Q9H501 851 aaKnown RBP21.95■■□□□ 1.1
TOP3B-215ENST00000470338 CNTLNQ9NXG0 1405 aa21.95■■□□□ 1.1
TOP3B-215ENST00000470338 DNMT1P26358 1616 aaKnown RBP21.94■■□□□ 1.1
TOP3B-215ENST00000470338 MROH2AA6NES4 1674 aa21.94■■□□□ 1.1
TOP3B-215ENST00000470338 ABCC5O15440 1437 aa21.93■■□□□ 1.1
TOP3B-215ENST00000470338 PPP6R1Q9UPN7 881 aa21.93■■□□□ 1.1
TOP3B-215ENST00000470338 SHANK2Q9UPX8 1470 aa21.92■■□□□ 1.1
TOP3B-215ENST00000470338 GGT6Q6P531 493 aa21.92■■□□□ 1.1
TOP3B-215ENST00000470338 LMTK3Q96Q04 1460 aa21.91■■□□□ 1.1
TOP3B-215ENST00000470338 DAPK1P53355 1430 aa21.9■■□□□ 1.1
TOP3B-215ENST00000470338 CLTCQ00610 1675 aaKnown RBP21.9■■□□□ 1.1
TOP3B-215ENST00000470338 KIF3BO15066 747 aa21.89■■□□□ 1.09
TOP3B-215ENST00000470338 PREX1Q8TCU6 1659 aa21.88■■□□□ 1.09
TOP3B-215ENST00000470338 ZMYM3Q14202 1370 aa21.87■■□□□ 1.09
TOP3B-215ENST00000470338 EIF2AK4Q9P2K8 1649 aaKnown RBP21.85■■□□□ 1.09
TOP3B-215ENST00000470338 DUOX2Q9NRD8 1548 aa21.85■■□□□ 1.09
TOP3B-215ENST00000470338 FAM50AQ14320 339 aaKnown RBP21.83■■□□□ 1.09
TOP3B-215ENST00000470338 PPARGC1BQ86YN6 1023 aaKnown RBP21.83■■□□□ 1.09
TOP3B-215ENST00000470338 FAM135AQ9P2D6 1515 aa21.83■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms