RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 EIF4G3O43432 1585 aaKnown RBP19.13■□□□□ 0.65
BRCA1-209ENST00000470026 FKBP8Q14318 412 aa19.12■□□□□ 0.65
BRCA1-209ENST00000470026 TEX14Q8IWB6 1497 aa19.11■□□□□ 0.65
BRCA1-209ENST00000470026 EIF4G2P78344 907 aaKnown RBP eCLIP19.1■□□□□ 0.65
BRCA1-209ENST00000470026 L3MBTL2Q969R5 705 aa19.09■□□□□ 0.65
BRCA1-209ENST00000470026 ADCY10Q96PN6 1610 aa19.09■□□□□ 0.65
BRCA1-209ENST00000470026 TROQ12816 1431 aaPredicted RBP19.08■□□□□ 0.65
BRCA1-209ENST00000470026 NCOA1Q15788 1441 aa19.08■□□□□ 0.65
BRCA1-209ENST00000470026 CNTLNQ9NXG0 1405 aa19.08■□□□□ 0.64
BRCA1-209ENST00000470026 MAGI1Q96QZ7 1491 aaPredicted RBP19.08■□□□□ 0.64
BRCA1-209ENST00000470026 ITSN2Q9NZM3 1697 aa19.07■□□□□ 0.64
BRCA1-209ENST00000470026 CDK11AQ9UQ88 783 aaPredicted RBP19.06■□□□□ 0.64
BRCA1-209ENST00000470026 ADGBQ8N7X0 1667 aa19.05■□□□□ 0.64
BRCA1-209ENST00000470026 ADGRL2O95490 1459 aa19.04■□□□□ 0.64
BRCA1-209ENST00000470026 POLR1AO95602 1720 aaPredicted RBP19.04■□□□□ 0.64
BRCA1-209ENST00000470026 ARID3CA6NKF2 412 aa19.04■□□□□ 0.64
BRCA1-209ENST00000470026 NEFLP07196 543 aa19.04■□□□□ 0.64
BRCA1-209ENST00000470026 SPATA31E1Q6ZUB1 1445 aa19.04■□□□□ 0.64
BRCA1-209ENST00000470026 ZNF644Q9H582 1327 aaPredicted RBP19.04■□□□□ 0.64
BRCA1-209ENST00000470026 CEP170Q5SW79 1584 aa19.04■□□□□ 0.64
BRCA1-209ENST00000470026 PZPP20742 1482 aa19.03■□□□□ 0.64
BRCA1-209ENST00000470026 CAMSAP2Q08AD1 1489 aa19.03■□□□□ 0.64
BRCA1-209ENST00000470026 CCDC7Q96M83 1385 aa19.03■□□□□ 0.64
BRCA1-209ENST00000470026 CROCC2H7BZ55 1655 aa19.02■□□□□ 0.64
BRCA1-209ENST00000470026 GPATCH8Q9UKJ3 1502 aaKnown RBP19.02■□□□□ 0.63
BRCA1-209ENST00000470026 PRG4Q92954 1404 aaPredicted RBP19.01■□□□□ 0.63
BRCA1-209ENST00000470026 SYNJ2O15056 1496 aa19.01■□□□□ 0.63
BRCA1-209ENST00000470026 FOXD1Q16676 465 aa19.01■□□□□ 0.63
BRCA1-209ENST00000470026 NBPF8Q3BBV2 869 aa19■□□□□ 0.63
BRCA1-209ENST00000470026 BCANQ96GW7 911 aa19■□□□□ 0.63
BRCA1-209ENST00000470026 NUP160Q12769 1436 aa18.98■□□□□ 0.63
BRCA1-209ENST00000470026 MBD5Q9P267 1494 aa18.98■□□□□ 0.63
BRCA1-209ENST00000470026 C11orf95C9JLR9 678 aaPredicted RBP18.98■□□□□ 0.63
BRCA1-209ENST00000470026 PLB1Q6P1J6 1458 aa18.98■□□□□ 0.63
BRCA1-209ENST00000470026 KIF14Q15058 1648 aa18.98■□□□□ 0.63
BRCA1-209ENST00000470026 SLC4A1APQ9BWU0 796 aaKnown RBP18.96■□□□□ 0.63
BRCA1-209ENST00000470026 HNRNPUQ00839 825 aaKnown RBP eCLIP18.94■□□□□ 0.62
BRCA1-209ENST00000470026 CFDP1Q9UEE9 299 aaPredicted RBP18.94■□□□□ 0.62
BRCA1-209ENST00000470026 KIAA1107Q9UPP5 1409 aa18.93■□□□□ 0.62
BRCA1-209ENST00000470026 PRKRIP1Q9H875 184 aaPredicted RBP18.93■□□□□ 0.62
BRCA1-209ENST00000470026 CARMIL2Q6F5E8 1435 aa18.93■□□□□ 0.62
BRCA1-209ENST00000470026 ABCA8O94911 1581 aa18.92■□□□□ 0.62
BRCA1-209ENST00000470026 SHANK2Q9UPX8 1470 aa18.91■□□□□ 0.62
BRCA1-209ENST00000470026 ABCC10Q5T3U5 1492 aa18.9■□□□□ 0.62
BRCA1-209ENST00000470026 KIF7Q2M1P5 1343 aa18.9■□□□□ 0.62
BRCA1-209ENST00000470026 CHMP7Q8WUX9 453 aaPredicted RBP18.89■□□□□ 0.62
BRCA1-209ENST00000470026 CDC42BPAQ5VT25 1732 aa18.89■□□□□ 0.61
BRCA1-209ENST00000470026 ANKRD30AQ9BXX3 1397 aa18.89■□□□□ 0.61
BRCA1-209ENST00000470026 CCDC184Q52MB2 194 aa18.88■□□□□ 0.61
BRCA1-209ENST00000470026 JPH4Q96JJ6 628 aa18.87■□□□□ 0.61
BRCA1-209ENST00000470026 KDM5DQ9BY66 1539 aa18.87■□□□□ 0.61
BRCA1-209ENST00000470026 ERCC6Q03468 1493 aa18.86■□□□□ 0.61
BRCA1-209ENST00000470026 ERICH6BQ5W0A0 696 aa18.86■□□□□ 0.61
BRCA1-209ENST00000470026 ANKRD50Q9ULJ7 1429 aa18.85■□□□□ 0.61
BRCA1-209ENST00000470026 UHRF1BP1Q6BDS2 1440 aa18.85■□□□□ 0.61
BRCA1-209ENST00000470026 ATP10BO94823 1461 aa18.83■□□□□ 0.61
BRCA1-209ENST00000470026 KDM5CP41229 1560 aa18.83■□□□□ 0.6
BRCA1-209ENST00000470026 BCORL1Q5H9F3 1711 aa18.82■□□□□ 0.6
BRCA1-209ENST00000470026 DHX29Q7Z478 1369 aaKnown RBP18.81■□□□□ 0.6
BRCA1-209ENST00000470026 ARID4BQ4LE39 1312 aaPredicted RBP18.81■□□□□ 0.6
BRCA1-209ENST00000470026 ZBED9Q6R2W3 1325 aa18.81■□□□□ 0.6
BRCA1-209ENST00000470026 ARHGEF12Q9NZN5 1544 aa18.81■□□□□ 0.6
BRCA1-209ENST00000470026 ARHGEF5Q12774 1597 aa18.8■□□□□ 0.6
BRCA1-209ENST00000470026 PKD2Q13563 968 aa18.8■□□□□ 0.6
BRCA1-209ENST00000470026 RBM19Q9Y4C8 960 aaKnown RBP18.8■□□□□ 0.6
BRCA1-209ENST00000470026 PTPRGP23470 1445 aa18.79■□□□□ 0.6
BRCA1-209ENST00000470026 C9orf84Q5VXU9 1444 aa18.79■□□□□ 0.6
BRCA1-209ENST00000470026 RALGAPBQ86X10 1494 aa18.79■□□□□ 0.6
BRCA1-209ENST00000470026 USP47Q96K76 1375 aa18.79■□□□□ 0.6
BRCA1-209ENST00000470026 MRS2Q9HD23 443 aa18.79■□□□□ 0.6
BRCA1-209ENST00000470026 PLEKHD1A6NEE1 506 aa18.78■□□□□ 0.6
BRCA1-209ENST00000470026 ANP32EQ9BTT0 268 aa18.78■□□□□ 0.6
BRCA1-209ENST00000470026 ZNF777Q9ULD5 760 aaPredicted RBP18.77■□□□□ 0.6
BRCA1-209ENST00000470026 NUP155O75694 1391 aa18.72■□□□□ 0.59
BRCA1-209ENST00000470026 FBLN2P98095 1184 aa18.72■□□□□ 0.59
BRCA1-209ENST00000470026 FAM9BQ8IZU0 186 aa18.72■□□□□ 0.59
BRCA1-209ENST00000470026 ROCK2O75116 1388 aaKnown RBP18.71■□□□□ 0.59
BRCA1-209ENST00000470026 PREX2Q70Z35 1606 aa18.7■□□□□ 0.58
BRCA1-209ENST00000470026 PPP4R2Q9NY27 417 aa18.7■□□□□ 0.58
BRCA1-209ENST00000470026 KIF15Q9NS87 1388 aa18.69■□□□□ 0.58
BRCA1-209ENST00000470026 SAMD9LQ8IVG5 1584 aa18.69■□□□□ 0.58
BRCA1-209ENST00000470026 CDC42BPBQ9Y5S2 1711 aa18.68■□□□□ 0.58
BRCA1-209ENST00000470026 TSPY4P0CV99 314 aa18.67■□□□□ 0.58
BRCA1-209ENST00000470026 TSPY10P0CW01 314 aa18.67■□□□□ 0.58
BRCA1-209ENST00000470026 CCDC141Q6ZP82 1450 aa18.67■□□□□ 0.58
BRCA1-209ENST00000470026 IRX6P78412 446 aaPredicted RBP18.67■□□□□ 0.58
BRCA1-209ENST00000470026 SMG6Q86US8 1419 aaKnown RBP18.67■□□□□ 0.58
BRCA1-209ENST00000470026 MAST1Q9Y2H9 1570 aa18.66■□□□□ 0.58
BRCA1-209ENST00000470026 RSPH4AQ5TD94 716 aa18.64■□□□□ 0.57
BRCA1-209ENST00000470026 E9PCH4 1651 aa18.64■□□□□ 0.57
BRCA1-209ENST00000470026 FAM135AQ9P2D6 1515 aa18.64■□□□□ 0.57
BRCA1-209ENST00000470026 UNC13BO14795 1591 aa18.62■□□□□ 0.57
BRCA1-209ENST00000470026 FANCIQ9NVI1 1328 aa18.61■□□□□ 0.57
BRCA1-209ENST00000470026 HNRNPMP52272 730 aaKnown RBP eCLIP18.61■□□□□ 0.57
BRCA1-209ENST00000470026 ZNF326Q5BKZ1 582 aaKnown RBP18.61■□□□□ 0.57
BRCA1-209ENST00000470026 RNF123Q5XPI4 1314 aa18.61■□□□□ 0.57
BRCA1-209ENST00000470026 CARD11Q9BXL7 1154 aa18.61■□□□□ 0.57
BRCA1-209ENST00000470026 KTN1Q86UP2 1357 aaKnown RBP18.6■□□□□ 0.57
BRCA1-209ENST00000470026 SHROOM2Q13796 1616 aa18.6■□□□□ 0.57
BRCA1-209ENST00000470026 TRPM1Q7Z4N2 1603 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms