RNA–Protein interactions for RNA: ENST00000469601.1

RTN4R-205, Transcript of reticulon 4 receptor, humanhuman

TSL 3

Gene RTN4R, Length 672 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4R-205ENST00000469601 MAGI2Q86UL8 1455 aa34.06■■■■□ 3.04
RTN4R-205ENST00000469601 ZMYM4Q5VZL5 1548 aa34.05■■■■□ 3.04
RTN4R-205ENST00000469601 ARHGEF40Q8TER5 1519 aa34.03■■■■□ 3.04
RTN4R-205ENST00000469601 LOC105371045A0A1W2PR82 267 aa34.02■■■■□ 3.04
RTN4R-205ENST00000469601 ARID4BQ4LE39 1312 aaPredicted RBP34.01■■■■□ 3.03
RTN4R-205ENST00000469601 ZFYVE16Q7Z3T8 1539 aa33.98■■■■□ 3.03
RTN4R-205ENST00000469601 MTUS2Q5JR59 1369 aa33.97■■■■□ 3.03
RTN4R-205ENST00000469601 ZNF518AQ6AHZ1 1483 aa33.95■■■■□ 3.03
RTN4R-205ENST00000469601 PREX2Q70Z35 1606 aa33.94■■■■□ 3.02
RTN4R-205ENST00000469601 YEATS2Q9ULM3 1422 aa33.91■■■■□ 3.02
RTN4R-205ENST00000469601 CDC42BPBQ9Y5S2 1711 aa33.89■■■■□ 3.02
RTN4R-205ENST00000469601 AFAP1Q8N556 730 aa33.88■■■■□ 3.01
RTN4R-205ENST00000469601 CCNB3Q8WWL7 1395 aa33.85■■■■□ 3.01
RTN4R-205ENST00000469601 GPATCH8Q9UKJ3 1502 aaKnown RBP33.84■■■■□ 3.01
RTN4R-205ENST00000469601 ADAMTSL3P82987 1691 aa33.84■■■■□ 3.01
RTN4R-205ENST00000469601 ATP10AO60312 1499 aa33.83■■■■□ 3.01
RTN4R-205ENST00000469601 KDM5CP41229 1560 aa33.83■■■■□ 3.01
RTN4R-205ENST00000469601 MYT1LQ9UL68 1186 aa33.83■■■■□ 3.01
RTN4R-205ENST00000469601 ABCC1P33527 1531 aa33.83■■■■□ 3.01
RTN4R-205ENST00000469601 BCORL1Q5H9F3 1711 aa33.82■■■■□ 3
RTN4R-205ENST00000469601 CDC42BPAQ5VT25 1732 aa33.82■■■■□ 3
RTN4R-205ENST00000469601 VPS8Q8N3P4 1428 aa33.81■■■■□ 3
RTN4R-205ENST00000469601 EHBP1L1Q8N3D4 1523 aa33.81■■■■□ 3
RTN4R-205ENST00000469601 CFDP1Q9UEE9 299 aaPredicted RBP33.81■■■■□ 3
RTN4R-205ENST00000469601 ZNF777Q9ULD5 760 aaPredicted RBP33.8■■■■□ 3
RTN4R-205ENST00000469601 C9orf84Q5VXU9 1444 aa33.79■■■■□ 3
RTN4R-205ENST00000469601 PTPRMP28827 1452 aa33.77■■■■□ 3
RTN4R-205ENST00000469601 ARHGEF12Q9NZN5 1544 aa33.77■■■■□ 3
RTN4R-205ENST00000469601 MLH3Q9UHC1 1453 aa33.76■■■■□ 3
RTN4R-205ENST00000469601 TRAPPC8Q9Y2L5 1435 aa33.76■■■□□ 2.99
RTN4R-205ENST00000469601 HECW2Q9P2P5 1572 aa33.74■■■□□ 2.99
RTN4R-205ENST00000469601 PLEKHH2Q8IVE3 1493 aa33.74■■■□□ 2.99
RTN4R-205ENST00000469601 KIAA1107Q9UPP5 1409 aa33.71■■■□□ 2.99
RTN4R-205ENST00000469601 ITSN2Q9NZM3 1697 aa33.71■■■□□ 2.99
RTN4R-205ENST00000469601 MADDQ8WXG6 1647 aa33.7■■■□□ 2.99
RTN4R-205ENST00000469601 SAMD9LQ8IVG5 1584 aa33.69■■■□□ 2.98
RTN4R-205ENST00000469601 MLECQ14165 292 aa33.67■■■□□ 2.98
RTN4R-205ENST00000469601 TIAM1Q13009 1591 aa33.67■■■□□ 2.98
RTN4R-205ENST00000469601 HNRNPMP52272 730 aaKnown RBP eCLIP33.66■■■□□ 2.98
RTN4R-205ENST00000469601 SYCP2Q9BX26 1530 aa33.65■■■□□ 2.98
RTN4R-205ENST00000469601 DIP2CQ9Y2E4 1556 aa33.64■■■□□ 2.98
RTN4R-205ENST00000469601 SIGLEC1Q9BZZ2 1709 aa33.63■■■□□ 2.97
RTN4R-205ENST00000469601 REREQ9P2R6 1566 aa33.63■■■□□ 2.97
RTN4R-205ENST00000469601 SPAG9O60271 1321 aaKnown RBP33.62■■■□□ 2.97
RTN4R-205ENST00000469601 NCOA2Q15596 1464 aa33.61■■■□□ 2.97
RTN4R-205ENST00000469601 SUPT6HQ7KZ85 1726 aaKnown RBP33.59■■■□□ 2.97
RTN4R-205ENST00000469601 MAP3K1Q13233 1512 aa33.59■■■□□ 2.97
RTN4R-205ENST00000469601 RIMS1Q86UR5 1692 aaKnown RBP33.58■■■□□ 2.97
RTN4R-205ENST00000469601 ABCA6Q8N139 1617 aa33.57■■■□□ 2.97
RTN4R-205ENST00000469601 LRRC9Q6ZRR7 1453 aa33.57■■■□□ 2.97
RTN4R-205ENST00000469601 ZNF644Q9H582 1327 aaPredicted RBP33.53■■■□□ 2.96
RTN4R-205ENST00000469601 AGLP35573 1532 aa33.53■■■□□ 2.96
RTN4R-205ENST00000469601 KIDINS220Q9ULH0 1771 aa33.53■■■□□ 2.96
RTN4R-205ENST00000469601 APLP2Q06481 763 aa33.52■■■□□ 2.96
RTN4R-205ENST00000469601 FER1L4A9Z1Z3 1794 aa33.48■■■□□ 2.95
RTN4R-205ENST00000469601 MBD5Q9P267 1494 aa33.48■■■□□ 2.95
RTN4R-205ENST00000469601 ATP7AQ04656 1500 aa33.48■■■□□ 2.95
RTN4R-205ENST00000469601 RSPH4AQ5TD94 716 aa33.47■■■□□ 2.95
RTN4R-205ENST00000469601 PLPPR3Q6T4P5 718 aa33.46■■■□□ 2.95
RTN4R-205ENST00000469601 KANK4Q5T7N3 995 aaPredicted RBP33.45■■■□□ 2.95
RTN4R-205ENST00000469601 ESF1Q9H501 851 aaKnown RBP33.45■■■□□ 2.95
RTN4R-205ENST00000469601 INO80Q9ULG1 1556 aaPredicted RBP33.43■■■□□ 2.94
RTN4R-205ENST00000469601 RTEL1-TNFRSF6BF6WH68 1400 aa33.41■■■□□ 2.94
RTN4R-205ENST00000469601 CAMSAP2Q08AD1 1489 aa33.41■■■□□ 2.94
RTN4R-205ENST00000469601 A2MP01023 1474 aa33.38■■■□□ 2.93
RTN4R-205ENST00000469601 CCDC141Q6ZP82 1450 aa33.37■■■□□ 2.93
RTN4R-205ENST00000469601 LMTK3Q96Q04 1460 aa33.36■■■□□ 2.93
RTN4R-205ENST00000469601 CNTLNQ9NXG0 1405 aa33.35■■■□□ 2.93
RTN4R-205ENST00000469601 MIA2Q96PC5 1412 aa33.33■■■□□ 2.93
RTN4R-205ENST00000469601 CEBPAP49715 358 aaPredicted RBP33.32■■■□□ 2.92
RTN4R-205ENST00000469601 MYOM3Q5VTT5 1437 aa33.32■■■□□ 2.92
RTN4R-205ENST00000469601 TSPY4P0CV99 314 aa33.31■■■□□ 2.92
RTN4R-205ENST00000469601 TSPY10P0CW01 314 aa33.31■■■□□ 2.92
RTN4R-205ENST00000469601 PLXNC1O60486 1568 aa33.3■■■□□ 2.92
RTN4R-205ENST00000469601 ARHGEF5Q12774 1597 aa33.28■■■□□ 2.92
RTN4R-205ENST00000469601 ADGBQ8N7X0 1667 aa33.27■■■□□ 2.92
RTN4R-205ENST00000469601 DHX29Q7Z478 1369 aaKnown RBP33.25■■■□□ 2.91
RTN4R-205ENST00000469601 PPP6R1Q9UPN7 881 aa33.25■■■□□ 2.91
RTN4R-205ENST00000469601 GGT6Q6P531 493 aa33.21■■■□□ 2.91
RTN4R-205ENST00000469601 HSPA2P54652 639 aa33.19■■■□□ 2.9
RTN4R-205ENST00000469601 UHRF1BP1Q6BDS2 1440 aa33.17■■■□□ 2.9
RTN4R-205ENST00000469601 C3P01024 1663 aa33.15■■■□□ 2.9
RTN4R-205ENST00000469601 ZMYM3Q14202 1370 aa33.15■■■□□ 2.9
RTN4R-205ENST00000469601 PREX1Q8TCU6 1659 aa33.15■■■□□ 2.9
RTN4R-205ENST00000469601 MROH2AA6NES4 1674 aa33.13■■■□□ 2.89
RTN4R-205ENST00000469601 KIF3BO15066 747 aa33.12■■■□□ 2.89
RTN4R-205ENST00000469601 NPATQ14207 1427 aa33.11■■■□□ 2.89
RTN4R-205ENST00000469601 MAST1Q9Y2H9 1570 aa33.1■■■□□ 2.89
RTN4R-205ENST00000469601 FGD6Q6ZV73 1430 aa33.07■■■□□ 2.88
RTN4R-205ENST00000469601 SETD1BQ9UPS6 1966 aaKnown RBP33.07■■■□□ 2.88
RTN4R-205ENST00000469601 PTPN23Q9H3S7 1636 aa33.04■■■□□ 2.88
RTN4R-205ENST00000469601 CLTCQ00610 1675 aaKnown RBP33.03■■■□□ 2.88
RTN4R-205ENST00000469601 FAM135AQ9P2D6 1515 aa33.02■■■□□ 2.88
RTN4R-205ENST00000469601 TCOF1Q13428 1488 aaKnown RBP33■■■□□ 2.87
RTN4R-205ENST00000469601 SHANK2Q9UPX8 1470 aa32.99■■■□□ 2.87
RTN4R-205ENST00000469601 ABCC5O15440 1437 aa32.98■■■□□ 2.87
RTN4R-205ENST00000469601 WASHC2CQ9Y4E1 1318 aa32.98■■■□□ 2.87
RTN4R-205ENST00000469601 DMRT2Q9Y5R5 561 aa32.97■■■□□ 2.87
RTN4R-205ENST00000469601 PTPRKQ15262 1439 aa32.96■■■□□ 2.87
RTN4R-205ENST00000469601 KDM5DQ9BY66 1539 aa32.96■■■□□ 2.87
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms