RNA–Protein interactions for RNA: ENST00000469400.1

TRAPPC12-216, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 720 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-216ENST00000469400 CDK13Q14004 1512 aaKnown RBP21.5■■□□□ 1.03
TRAPPC12-216ENST00000469400 CERKQ8TCT0 537 aa21.5■■□□□ 1.03
TRAPPC12-216ENST00000469400 ATP10AO60312 1499 aa21.45■■□□□ 1.03
TRAPPC12-216ENST00000469400 EFCAB2Q5VUJ9 269 aa21.44■■□□□ 1.02
TRAPPC12-216ENST00000469400 FER1L4A9Z1Z3 1794 aa21.43■■□□□ 1.02
TRAPPC12-216ENST00000469400 ATP1B4Q9UN42 357 aaPredicted RBP21.43■■□□□ 1.02
TRAPPC12-216ENST00000469400 C9orf84Q5VXU9 1444 aa21.43■■□□□ 1.02
TRAPPC12-216ENST00000469400 ARHGEF12Q9NZN5 1544 aa21.43■■□□□ 1.02
TRAPPC12-216ENST00000469400 CEBPAP49715 358 aaPredicted RBP21.41■■□□□ 1.02
TRAPPC12-216ENST00000469400 CDK11AQ9UQ88 783 aaPredicted RBP21.38■■□□□ 1.01
TRAPPC12-216ENST00000469400 FMN1Q68DA7 1419 aa21.37■■□□□ 1.01
TRAPPC12-216ENST00000469400 AFAP1Q8N556 730 aa21.36■■□□□ 1.01
TRAPPC12-216ENST00000469400 EHMT2Q96KQ7 1210 aa21.36■■□□□ 1.01
TRAPPC12-216ENST00000469400 UBTFP17480 764 aaKnown RBP21.35■■□□□ 1.01
TRAPPC12-216ENST00000469400 ZNF518AQ6AHZ1 1483 aa21.34■■□□□ 1.01
TRAPPC12-216ENST00000469400 MYO5CQ9NQX4 1742 aa21.33■■□□□ 1.01
TRAPPC12-216ENST00000469400 DMRT2Q9Y5R5 561 aa21.33■■□□□ 1.01
TRAPPC12-216ENST00000469400 PREX1Q8TCU6 1659 aa21.33■■□□□ 1
TRAPPC12-216ENST00000469400 KIF14Q15058 1648 aa21.32■■□□□ 1
TRAPPC12-216ENST00000469400 TROQ12816 1431 aaPredicted RBP21.31■■□□□ 1
TRAPPC12-216ENST00000469400 MYT1LQ9UL68 1186 aa21.31■■□□□ 1
TRAPPC12-216ENST00000469400 ARHGAP35Q9NRY4 1499 aa21.31■■□□□ 1
TRAPPC12-216ENST00000469400 ARHGAP5Q13017 1502 aa21.3■■□□□ 1
TRAPPC12-216ENST00000469400 UHRF1BP1Q6BDS2 1440 aa21.29■■□□□ 1
TRAPPC12-216ENST00000469400 KDM5CP41229 1560 aa21.29■■□□□ 1
TRAPPC12-216ENST00000469400 CLIP1P30622 1438 aa21.27■■□□□ 1
TRAPPC12-216ENST00000469400 STRCQ7RTU9 1775 aa21.26■□□□□ 0.99
TRAPPC12-216ENST00000469400 DIP2CQ9Y2E4 1556 aa21.24■□□□□ 0.99
TRAPPC12-216ENST00000469400 SETD1BQ9UPS6 1966 aaKnown RBP21.23■□□□□ 0.99
TRAPPC12-216ENST00000469400 MLH3Q9UHC1 1453 aa21.23■□□□□ 0.99
TRAPPC12-216ENST00000469400 REREQ9P2R6 1566 aa21.23■□□□□ 0.99
TRAPPC12-216ENST00000469400 DISP3Q9P2K9 1392 aa21.23■□□□□ 0.99
TRAPPC12-216ENST00000469400 ILDR2Q71H61 639 aa21.21■□□□□ 0.99
TRAPPC12-216ENST00000469400 TRAPPC8Q9Y2L5 1435 aa21.21■□□□□ 0.99
TRAPPC12-216ENST00000469400 ESF1Q9H501 851 aaKnown RBP21.2■□□□□ 0.98
TRAPPC12-216ENST00000469400 PTPRTO14522 1441 aa21.2■□□□□ 0.98
TRAPPC12-216ENST00000469400 ABCA6Q8N139 1617 aa21.19■□□□□ 0.98
TRAPPC12-216ENST00000469400 AGLP35573 1532 aa21.18■□□□□ 0.98
TRAPPC12-216ENST00000469400 CDC42BPBQ9Y5S2 1711 aa21.17■□□□□ 0.98
TRAPPC12-216ENST00000469400 C3P01024 1663 aa21.16■□□□□ 0.98
TRAPPC12-216ENST00000469400 LRRIQ1Q96JM4 1722 aa21.15■□□□□ 0.98
TRAPPC12-216ENST00000469400 ABCC1P33527 1531 aa21.15■□□□□ 0.98
TRAPPC12-216ENST00000469400 SOCS7O14512 581 aa21.13■□□□□ 0.97
TRAPPC12-216ENST00000469400 PREX2Q70Z35 1606 aa21.12■□□□□ 0.97
TRAPPC12-216ENST00000469400 CNTLNQ9NXG0 1405 aa21.12■□□□□ 0.97
TRAPPC12-216ENST00000469400 NCOA1Q15788 1441 aa21.11■□□□□ 0.97
TRAPPC12-216ENST00000469400 LTBP4Q8N2S1 1624 aa21.1■□□□□ 0.97
TRAPPC12-216ENST00000469400 CASKIN1Q8WXD9 1431 aa21.1■□□□□ 0.97
TRAPPC12-216ENST00000469400 ITSN2Q9NZM3 1697 aa21.09■□□□□ 0.97
TRAPPC12-216ENST00000469400 CCDC18Q5T9S5 1454 aa21.09■□□□□ 0.97
TRAPPC12-216ENST00000469400 KIDINS220Q9ULH0 1771 aa21.08■□□□□ 0.97
TRAPPC12-216ENST00000469400 ZNF777Q9ULD5 760 aaPredicted RBP21.06■□□□□ 0.96
TRAPPC12-216ENST00000469400 CHIC1Q5VXU3 224 aa21.05■□□□□ 0.96
TRAPPC12-216ENST00000469400 ZMYM3Q14202 1370 aa21.05■□□□□ 0.96
TRAPPC12-216ENST00000469400 NPATQ14207 1427 aa21.04■□□□□ 0.96
TRAPPC12-216ENST00000469400 IQSEC2Q5JU85 1478 aa21.04■□□□□ 0.96
TRAPPC12-216ENST00000469400 SAMD9LQ8IVG5 1584 aa21.03■□□□□ 0.96
TRAPPC12-216ENST00000469400 SPAG9O60271 1321 aaKnown RBP21.03■□□□□ 0.96
TRAPPC12-216ENST00000469400 CDC42BPAQ5VT25 1732 aa21.02■□□□□ 0.96
TRAPPC12-216ENST00000469400 CAMSAP1Q5T5Y3 1602 aa21.02■□□□□ 0.96
TRAPPC12-216ENST00000469400 NCKAP5LQ9HCH0 1330 aa21.02■□□□□ 0.95
TRAPPC12-216ENST00000469400 SPATA31D1Q6ZQQ2 1576 aa21.02■□□□□ 0.95
TRAPPC12-216ENST00000469400 HNRNPMP52272 730 aaKnown RBP eCLIP21.01■□□□□ 0.951e-6■■■■□ 26.1
TRAPPC12-216ENST00000469400 GPATCH8Q9UKJ3 1502 aaKnown RBP20.99■□□□□ 0.95
TRAPPC12-216ENST00000469400 SYCP2Q9BX26 1530 aa20.99■□□□□ 0.95
TRAPPC12-216ENST00000469400 MROH2AA6NES4 1674 aa20.98■□□□□ 0.95
TRAPPC12-216ENST00000469400 ZNF335Q9H4Z2 1342 aaPredicted RBP20.98■□□□□ 0.95
TRAPPC12-216ENST00000469400 FYCO1Q9BQS8 1478 aa20.97■□□□□ 0.95
TRAPPC12-216ENST00000469400 CFDP1Q9UEE9 299 aaPredicted RBP20.95■□□□□ 0.94
TRAPPC12-216ENST00000469400 KIAA1107Q9UPP5 1409 aa20.95■□□□□ 0.94
TRAPPC12-216ENST00000469400 PKD2Q13563 968 aa20.94■□□□□ 0.94
TRAPPC12-216ENST00000469400 SUPT6HQ7KZ85 1726 aaKnown RBP20.94■□□□□ 0.94
TRAPPC12-216ENST00000469400 ATP7AQ04656 1500 aa20.94■□□□□ 0.94
TRAPPC12-216ENST00000469400 UBAP1LF5GYI3 381 aa20.93■□□□□ 0.94
TRAPPC12-216ENST00000469400 GGT6Q6P531 493 aa20.93■□□□□ 0.94
TRAPPC12-216ENST00000469400 PTPRKQ15262 1439 aa20.93■□□□□ 0.94
TRAPPC12-216ENST00000469400 A2MP01023 1474 aa20.93■□□□□ 0.94
TRAPPC12-216ENST00000469400 PLXNC1O60486 1568 aa20.91■□□□□ 0.94
TRAPPC12-216ENST00000469400 PLA2R1Q13018 1463 aa20.91■□□□□ 0.94
TRAPPC12-216ENST00000469400 PLEKHH2Q8IVE3 1493 aa20.91■□□□□ 0.94
TRAPPC12-216ENST00000469400 CLTCQ00610 1675 aaKnown RBP20.9■□□□□ 0.94
TRAPPC12-216ENST00000469400 TCOF1Q13428 1488 aaKnown RBP20.89■□□□□ 0.94
TRAPPC12-216ENST00000469400 CCNB3Q8WWL7 1395 aa20.89■□□□□ 0.93
TRAPPC12-216ENST00000469400 MYO3AQ8NEV4 1616 aa20.89■□□□□ 0.93
TRAPPC12-216ENST00000469400 INO80Q9ULG1 1556 aaPredicted RBP20.89■□□□□ 0.93
TRAPPC12-216ENST00000469400 PPP6R1Q9UPN7 881 aa20.88■□□□□ 0.93
TRAPPC12-216ENST00000469400 CEP170BQ9Y4F5 1589 aaPredicted RBP20.88■□□□□ 0.93
TRAPPC12-216ENST00000469400 ZNF142P52746 1687 aaPredicted RBP20.87■□□□□ 0.93
TRAPPC12-216ENST00000469400 ZNF644Q9H582 1327 aaPredicted RBP20.84■□□□□ 0.93
TRAPPC12-216ENST00000469400 MTUS2Q5JR59 1369 aa20.83■□□□□ 0.92
TRAPPC12-216ENST00000469400 A2ML1A8K2U0 1454 aa20.81■□□□□ 0.92
TRAPPC12-216ENST00000469400 MBD5Q9P267 1494 aa20.79■□□□□ 0.92
TRAPPC12-216ENST00000469400 ADGBQ8N7X0 1667 aa20.78■□□□□ 0.92
TRAPPC12-216ENST00000469400 DHX29Q7Z478 1369 aaKnown RBP20.77■□□□□ 0.92
TRAPPC12-216ENST00000469400 RTEL1-TNFRSF6BF6WH68 1400 aa20.77■□□□□ 0.91
TRAPPC12-216ENST00000469400 DNMT1P26358 1616 aaKnown RBP20.76■□□□□ 0.91
TRAPPC12-216ENST00000469400 FBXO31Q5XUX0 539 aaPredicted RBP20.76■□□□□ 0.91
TRAPPC12-216ENST00000469400 TNRQ92752 1358 aa20.74■□□□□ 0.91
TRAPPC12-216ENST00000469400 HSPA1LP34931 641 aa20.74■□□□□ 0.91
TRAPPC12-216ENST00000469400 TIAM1Q13009 1591 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms