RNA–Protein interactions for RNA: ENST00000469336.1

UBE3C-204, Transcript of ubiquitin protein ligase E3C, humanhuman

TSL 2

Gene UBE3C, Length 655 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-204ENST00000469336 CDAN1Q8IWY9 1227 aa13.87□□□□□ -0.19
UBE3C-204ENST00000469336 EMP3P54852 163 aa13.83□□□□□ -0.2
UBE3C-204ENST00000469336 ZNF710Q8N1W2 664 aa13.83□□□□□ -0.2
UBE3C-204ENST00000469336 C2orf72A6NCS6 295 aa13.82□□□□□ -0.2
UBE3C-204ENST00000469336 DOK7Q18PE1 504 aa13.82□□□□□ -0.2
UBE3C-204ENST00000469336 POTEB3A0JP26 581 aa13.81□□□□□ -0.2
UBE3C-204ENST00000469336 POTEBQ6S5H4 581 aa13.81□□□□□ -0.2
UBE3C-204ENST00000469336 PCDH10Q9P2E7 1040 aa13.81□□□□□ -0.2
UBE3C-204ENST00000469336 FAM205CA6NFA0 338 aa13.8□□□□□ -0.2
UBE3C-204ENST00000469336 KIF3CO14782 793 aa13.78□□□□□ -0.2
UBE3C-204ENST00000469336 DNAJC5Q9H3Z4 198 aa13.77□□□□□ -0.21
UBE3C-204ENST00000469336 SLC24A1O60721 1099 aa13.76□□□□□ -0.21
UBE3C-204ENST00000469336 HOXB1P14653 301 aaPredicted RBP13.76□□□□□ -0.21
UBE3C-204ENST00000469336 HS3ST6Q96QI5 342 aa13.75□□□□□ -0.21
UBE3C-204ENST00000469336 RIMBP2O15034 1052 aa13.72□□□□□ -0.21
UBE3C-204ENST00000469336 GPR153Q6NV75 609 aa13.71□□□□□ -0.21
UBE3C-204ENST00000469336 TMC2Q8TDI7 906 aa13.71□□□□□ -0.21
UBE3C-204ENST00000469336 KHSRPQ92945 711 aaKnown RBP eCLIP13.71□□□□□ -0.212e-7■■■□□ 16.5
UBE3C-204ENST00000469336 ARSIQ5FYB1 569 aa13.7□□□□□ -0.22
UBE3C-204ENST00000469336 GTPBP6O43824 516 aaPredicted RBP13.68□□□□□ -0.22
UBE3C-204ENST00000469336 ERBB3P21860 1342 aa13.66□□□□□ -0.22
UBE3C-204ENST00000469336 ZSWIM6Q9HCJ5 1215 aa13.65□□□□□ -0.22
UBE3C-204ENST00000469336 VARS2Q5ST30 1063 aaKnown RBP13.62□□□□□ -0.23
UBE3C-204ENST00000469336 KRTAP3-3Q9BYR6 98 aa13.6□□□□□ -0.23
UBE3C-204ENST00000469336 KRTAP3-2Q9BYR7 98 aa13.6□□□□□ -0.23
UBE3C-204ENST00000469336 GPHNQ9NQX3 736 aaPredicted RBP13.59□□□□□ -0.23
UBE3C-204ENST00000469336 RYDENQ9NUL5 291 aaKnown RBP13.59□□□□□ -0.23
UBE3C-204ENST00000469336 DSG2Q14126 1118 aa13.58□□□□□ -0.24
UBE3C-204ENST00000469336 NUDT7P0C024 238 aa13.57□□□□□ -0.24
UBE3C-204ENST00000469336 PLPP6Q8IY26 295 aa13.57□□□□□ -0.24
UBE3C-204ENST00000469336 PCDHGA4Q9Y5G9 962 aa13.57□□□□□ -0.24
UBE3C-204ENST00000469336 FOXK1P85037 733 aa13.56□□□□□ -0.24
UBE3C-204ENST00000469336 SLC34A2O95436 690 aa13.53□□□□□ -0.24
UBE3C-204ENST00000469336 PLCB2Q00722 1185 aa13.53□□□□□ -0.24
UBE3C-204ENST00000469336 SPNS2Q8IVW8 549 aa13.52□□□□□ -0.25
UBE3C-204ENST00000469336 NCKAP5LQ9HCH0 1330 aa13.52□□□□□ -0.25
UBE3C-204ENST00000469336 ZNF316A6NFI3 1004 aaPredicted RBP13.51□□□□□ -0.25
UBE3C-204ENST00000469336 CRISPLD2Q9H0B8 497 aa13.51□□□□□ -0.25
UBE3C-204ENST00000469336 BBXQ8WY36 941 aaPredicted RBP13.49□□□□□ -0.25
UBE3C-204ENST00000469336 CADPS2Q86UW7 1296 aa13.47□□□□□ -0.25
UBE3C-204ENST00000469336 LHX6Q9UPM6 363 aa13.47□□□□□ -0.25
UBE3C-204ENST00000469336 ZNF687Q8N1G0 1237 aa13.46□□□□□ -0.25
UBE3C-204ENST00000469336 PTCD2Q8WV60 388 aaKnown RBP13.45□□□□□ -0.26
UBE3C-204ENST00000469336 MMRN1Q13201 1228 aa13.44□□□□□ -0.26
UBE3C-204ENST00000469336 PPP1R15BQ5SWA1 713 aa13.44□□□□□ -0.26
UBE3C-204ENST00000469336 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.44□□□□□ -0.26
UBE3C-204ENST00000469336 UPF1Q92900 1129 aaKnown RBP eCLIP13.43□□□□□ -0.26
UBE3C-204ENST00000469336 LARP6Q9BRS8 491 aaKnown RBP13.43□□□□□ -0.26
UBE3C-204ENST00000469336 PDE4AP27815 886 aa13.42□□□□□ -0.26
UBE3C-204ENST00000469336 KDM4FA0A1W2PPD8 638 aa13.41□□□□□ -0.26
UBE3C-204ENST00000469336 POTEEQ6S8J3 1075 aa13.37□□□□□ -0.27
UBE3C-204ENST00000469336 OXER1Q8TDS5 423 aa13.36□□□□□ -0.27
UBE3C-204ENST00000469336 AXIN2Q9Y2T1 843 aa13.36□□□□□ -0.27
UBE3C-204ENST00000469336 DDX27Q96GQ7 796 aaKnown RBP13.35□□□□□ -0.27
UBE3C-204ENST00000469336 TBC1D12O60347 775 aa13.32□□□□□ -0.28
UBE3C-204ENST00000469336 MFSD10Q14728 455 aa13.32□□□□□ -0.28
UBE3C-204ENST00000469336 ANKRD13DQ6ZTN6 518 aa13.31□□□□□ -0.28
UBE3C-204ENST00000469336 SPRYD3Q8NCJ5 442 aa13.3□□□□□ -0.28
UBE3C-204ENST00000469336 CFAP44Q96MT7 982 aa13.3□□□□□ -0.28
UBE3C-204ENST00000469336 PAXIP1Q6ZW49 1069 aaPredicted RBP13.29□□□□□ -0.28
UBE3C-204ENST00000469336 HAP1P54257 671 aaPredicted RBP13.28□□□□□ -0.28
UBE3C-204ENST00000469336 EMILIN3Q9NT22 766 aa13.27□□□□□ -0.29
UBE3C-204ENST00000469336 LSM11P83369 360 aaKnown RBP eCLIP13.25□□□□□ -0.29
UBE3C-204ENST00000469336 PSEN2P49810 448 aa13.22□□□□□ -0.29
UBE3C-204ENST00000469336 PSDA5PKW4 1024 aaPredicted RBP13.21□□□□□ -0.29
UBE3C-204ENST00000469336 EVI5O60447 810 aa13.21□□□□□ -0.29
UBE3C-204ENST00000469336 PBX2P40425 430 aa13.2□□□□□ -0.3
UBE3C-204ENST00000469336 MAP3K9P80192 1104 aa13.2□□□□□ -0.3
UBE3C-204ENST00000469336 ARHGAP33O14559 1287 aa13.19□□□□□ -0.3
UBE3C-204ENST00000469336 PPP4R3BQ5MIZ7 849 aa13.19□□□□□ -0.3
UBE3C-204ENST00000469336 DMRTA1Q5VZB9 504 aa13.19□□□□□ -0.3
UBE3C-204ENST00000469336 ZNF454Q8N9F8 522 aa13.19□□□□□ -0.3
UBE3C-204ENST00000469336 MYT1LQ9UL68 1186 aa13.17□□□□□ -0.3
UBE3C-204ENST00000469336 RNF166Q96A37 237 aaPredicted RBP13.16□□□□□ -0.3
UBE3C-204ENST00000469336 ANO8Q9HCE9 1232 aaPredicted RBP13.15□□□□□ -0.3
UBE3C-204ENST00000469336 VSIG10Q8N0Z9 540 aa13.14□□□□□ -0.31
UBE3C-204ENST00000469336 KCNK17Q96T54 332 aa13.14□□□□□ -0.31
UBE3C-204ENST00000469336 FOSBP53539 338 aa13.13□□□□□ -0.31
UBE3C-204ENST00000469336 DPYSL4O14531 572 aa13.12□□□□□ -0.31
UBE3C-204ENST00000469336 CAMK2BQ13554 666 aa13.12□□□□□ -0.31
UBE3C-204ENST00000469336 ADGRD1Q6QNK2 874 aa13.11□□□□□ -0.31
UBE3C-204ENST00000469336 JPH4Q96JJ6 628 aa13.08□□□□□ -0.32
UBE3C-204ENST00000469336 ADAM33Q9BZ11 813 aa13.08□□□□□ -0.32
UBE3C-204ENST00000469336 BCL2L12Q9HB09 334 aa13.06□□□□□ -0.32
UBE3C-204ENST00000469336 TSHZ2Q9NRE2 1034 aa13.06□□□□□ -0.32
UBE3C-204ENST00000469336 PTGER2P43116 358 aa13.05□□□□□ -0.32
UBE3C-204ENST00000469336 ZDHHC16Q969W1 377 aa13.05□□□□□ -0.32
UBE3C-204ENST00000469336 PCDHGA10Q9Y5H3 936 aa13.05□□□□□ -0.32
UBE3C-204ENST00000469336 TK2O00142 265 aa13.01□□□□□ -0.33
UBE3C-204ENST00000469336 HRO43593 1189 aa13.01□□□□□ -0.33
UBE3C-204ENST00000469336 PTPREP23469 700 aa13.01□□□□□ -0.33
UBE3C-204ENST00000469336 KCNH8Q96L42 1107 aa13□□□□□ -0.33
UBE3C-204ENST00000469336 KDM2AQ9Y2K7 1162 aa13□□□□□ -0.33
UBE3C-204ENST00000469336 VPS9D1Q9Y2B5 631 aa12.99□□□□□ -0.33
UBE3C-204ENST00000469336 E2F4Q16254 413 aa12.98□□□□□ -0.33
UBE3C-204ENST00000469336 DDX12PQ92771 950 aa12.98□□□□□ -0.33
UBE3C-204ENST00000469336 WDR70Q9NW82 654 aa12.98□□□□□ -0.33
UBE3C-204ENST00000469336 PHF14O94880 888 aa12.95□□□□□ -0.34
UBE3C-204ENST00000469336 TYW1BQ6NUM6 668 aa12.94□□□□□ -0.34
UBE3C-204ENST00000469336 ZBED2Q9BTP6 218 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms