RNA–Protein interactions for RNA: ENST00000468963.1

SDCCAG3-209, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 2

Gene SDCCAG3, Length 686 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-209ENST00000468963 KIF14Q15058 1648 aa24.11■■□□□ 1.45
SDCCAG3-209ENST00000468963 CLIP1P30622 1438 aa24.1■■□□□ 1.45
SDCCAG3-209ENST00000468963 POGZQ7Z3K3 1410 aa24.1■■□□□ 1.45
SDCCAG3-209ENST00000468963 MYO5CQ9NQX4 1742 aa24.07■■□□□ 1.44
SDCCAG3-209ENST00000468963 ZFYVE16Q7Z3T8 1539 aa24.07■■□□□ 1.44
SDCCAG3-209ENST00000468963 MADDQ8WXG6 1647 aa24.05■■□□□ 1.44
SDCCAG3-209ENST00000468963 AFAP1Q8N556 730 aa24.04■■□□□ 1.44
SDCCAG3-209ENST00000468963 CCDC18Q5T9S5 1454 aa24.04■■□□□ 1.44
SDCCAG3-209ENST00000468963 PCF11O94913 1555 aaKnown RBP24.03■■□□□ 1.44
SDCCAG3-209ENST00000468963 ARHGAP5Q13017 1502 aa24.01■■□□□ 1.43
SDCCAG3-209ENST00000468963 SIGLEC1Q9BZZ2 1709 aa24.01■■□□□ 1.43
SDCCAG3-209ENST00000468963 ATP10AO60312 1499 aa24■■□□□ 1.43
SDCCAG3-209ENST00000468963 FYCO1Q9BQS8 1478 aa23.99■■□□□ 1.43
SDCCAG3-209ENST00000468963 MLECQ14165 292 aa23.97■■□□□ 1.43
SDCCAG3-209ENST00000468963 ZNF518AQ6AHZ1 1483 aa23.97■■□□□ 1.43
SDCCAG3-209ENST00000468963 ILDR1Q86SU0 546 aaPredicted RBP23.97■■□□□ 1.43
SDCCAG3-209ENST00000468963 CDC42BPBQ9Y5S2 1711 aa23.97■■□□□ 1.43
SDCCAG3-209ENST00000468963 RIMS1Q86UR5 1692 aaKnown RBP23.94■■□□□ 1.42
SDCCAG3-209ENST00000468963 C9orf84Q5VXU9 1444 aa23.93■■□□□ 1.42
SDCCAG3-209ENST00000468963 KDM5CP41229 1560 aa23.93■■□□□ 1.42
SDCCAG3-209ENST00000468963 ARHGEF12Q9NZN5 1544 aa23.92■■□□□ 1.42
SDCCAG3-209ENST00000468963 TRAPPC8Q9Y2L5 1435 aa23.91■■□□□ 1.42
SDCCAG3-209ENST00000468963 PREX2Q70Z35 1606 aa23.9■■□□□ 1.42
SDCCAG3-209ENST00000468963 MLH3Q9UHC1 1453 aa23.89■■□□□ 1.42
SDCCAG3-209ENST00000468963 PLPPR3Q6T4P5 718 aa23.89■■□□□ 1.41
SDCCAG3-209ENST00000468963 MYT1LQ9UL68 1186 aa23.89■■□□□ 1.41
SDCCAG3-209ENST00000468963 LMTK3Q96Q04 1460 aa23.88■■□□□ 1.41
SDCCAG3-209ENST00000468963 ABCC1P33527 1531 aa23.86■■□□□ 1.41
SDCCAG3-209ENST00000468963 GPATCH8Q9UKJ3 1502 aaKnown RBP23.86■■□□□ 1.41
SDCCAG3-209ENST00000468963 CDC42BPAQ5VT25 1732 aa23.85■■□□□ 1.41
SDCCAG3-209ENST00000468963 ZNF777Q9ULD5 760 aaPredicted RBP23.84■■□□□ 1.41
SDCCAG3-209ENST00000468963 DIP2CQ9Y2E4 1556 aa23.82■■□□□ 1.4
SDCCAG3-209ENST00000468963 FER1L4A9Z1Z3 1794 aa23.81■■□□□ 1.4
SDCCAG3-209ENST00000468963 CEBPAP49715 358 aaPredicted RBP23.81■■□□□ 1.4
SDCCAG3-209ENST00000468963 HSPA2P54652 639 aa23.81■■□□□ 1.4
SDCCAG3-209ENST00000468963 ITSN2Q9NZM3 1697 aa23.8■■□□□ 1.4
SDCCAG3-209ENST00000468963 HNRNPMP52272 730 aaKnown RBP eCLIP23.8■■□□□ 1.4
SDCCAG3-209ENST00000468963 REREQ9P2R6 1566 aa23.8■■□□□ 1.4
SDCCAG3-209ENST00000468963 CFDP1Q9UEE9 299 aaPredicted RBP23.79■■□□□ 1.4
SDCCAG3-209ENST00000468963 MTUS2Q5JR59 1369 aa23.78■■□□□ 1.4
SDCCAG3-209ENST00000468963 CEP162Q5TB80 1403 aa23.78■■□□□ 1.4
SDCCAG3-209ENST00000468963 ABCA6Q8N139 1617 aa23.78■■□□□ 1.4
SDCCAG3-209ENST00000468963 CCNB3Q8WWL7 1395 aa23.77■■□□□ 1.4
SDCCAG3-209ENST00000468963 AGLP35573 1532 aa23.76■■□□□ 1.39
SDCCAG3-209ENST00000468963 SAMD9LQ8IVG5 1584 aa23.76■■□□□ 1.39
SDCCAG3-209ENST00000468963 KIAA1107Q9UPP5 1409 aa23.76■■□□□ 1.39
SDCCAG3-209ENST00000468963 KIDINS220Q9ULH0 1771 aa23.75■■□□□ 1.39
SDCCAG3-209ENST00000468963 SPAG9O60271 1321 aaKnown RBP23.74■■□□□ 1.39
SDCCAG3-209ENST00000468963 LOC105371045A0A1W2PR82 267 aa23.73■■□□□ 1.39
SDCCAG3-209ENST00000468963 SYCP2Q9BX26 1530 aa23.71■■□□□ 1.39
SDCCAG3-209ENST00000468963 PLEKHH2Q8IVE3 1493 aa23.7■■□□□ 1.38
SDCCAG3-209ENST00000468963 SETD1BQ9UPS6 1966 aaKnown RBP23.69■■□□□ 1.38
SDCCAG3-209ENST00000468963 ZNF644Q9H582 1327 aaPredicted RBP23.69■■□□□ 1.38
SDCCAG3-209ENST00000468963 FBXO41Q8TF61 875 aa23.66■■□□□ 1.38
SDCCAG3-209ENST00000468963 ESF1Q9H501 851 aaKnown RBP23.66■■□□□ 1.38
SDCCAG3-209ENST00000468963 EHBP1L1Q8N3D4 1523 aa23.64■■□□□ 1.38
SDCCAG3-209ENST00000468963 TIAM1Q13009 1591 aa23.63■■□□□ 1.37
SDCCAG3-209ENST00000468963 MBD5Q9P267 1494 aa23.62■■□□□ 1.37
SDCCAG3-209ENST00000468963 PREX1Q8TCU6 1659 aa23.61■■□□□ 1.37
SDCCAG3-209ENST00000468963 ATP7AQ04656 1500 aa23.61■■□□□ 1.37
SDCCAG3-209ENST00000468963 CNTLNQ9NXG0 1405 aa23.6■■□□□ 1.37
SDCCAG3-209ENST00000468963 C3P01024 1663 aa23.59■■□□□ 1.37
SDCCAG3-209ENST00000468963 A2MP01023 1474 aa23.58■■□□□ 1.37
SDCCAG3-209ENST00000468963 UHRF1BP1Q6BDS2 1440 aa23.58■■□□□ 1.36
SDCCAG3-209ENST00000468963 INO80Q9ULG1 1556 aaPredicted RBP23.57■■□□□ 1.36
SDCCAG3-209ENST00000468963 NCOA2Q15596 1464 aa23.56■■□□□ 1.36
SDCCAG3-209ENST00000468963 ZMYM3Q14202 1370 aa23.55■■□□□ 1.36
SDCCAG3-209ENST00000468963 SUPT6HQ7KZ85 1726 aaKnown RBP23.54■■□□□ 1.36
SDCCAG3-209ENST00000468963 PLXNC1O60486 1568 aa23.54■■□□□ 1.36
SDCCAG3-209ENST00000468963 RTEL1-TNFRSF6BF6WH68 1400 aa23.54■■□□□ 1.36
SDCCAG3-209ENST00000468963 VPS8Q8N3P4 1428 aa23.54■■□□□ 1.36
SDCCAG3-209ENST00000468963 RSPH4AQ5TD94 716 aa23.53■■□□□ 1.36
SDCCAG3-209ENST00000468963 DMRT2Q9Y5R5 561 aa23.53■■□□□ 1.36
SDCCAG3-209ENST00000468963 GGT6Q6P531 493 aa23.52■■□□□ 1.36
SDCCAG3-209ENST00000468963 PPP6R1Q9UPN7 881 aa23.52■■□□□ 1.36
SDCCAG3-209ENST00000468963 STRCQ7RTU9 1775 aa23.5■■□□□ 1.35
SDCCAG3-209ENST00000468963 CERKQ8TCT0 537 aa23.5■■□□□ 1.35
SDCCAG3-209ENST00000468963 DHX29Q7Z478 1369 aaKnown RBP23.5■■□□□ 1.35
SDCCAG3-209ENST00000468963 NPATQ14207 1427 aa23.49■■□□□ 1.35
SDCCAG3-209ENST00000468963 KANK4Q5T7N3 995 aaPredicted RBP23.48■■□□□ 1.35
SDCCAG3-209ENST00000468963 LRRC9Q6ZRR7 1453 aa23.48■■□□□ 1.35
SDCCAG3-209ENST00000468963 MROH2AA6NES4 1674 aa23.47■■□□□ 1.35
SDCCAG3-209ENST00000468963 ADGBQ8N7X0 1667 aa23.46■■□□□ 1.35
SDCCAG3-209ENST00000468963 CAMSAP2Q08AD1 1489 aa23.45■■□□□ 1.34
SDCCAG3-209ENST00000468963 CCDC141Q6ZP82 1450 aa23.44■■□□□ 1.34
SDCCAG3-209ENST00000468963 MAP3K1Q13233 1512 aa23.43■■□□□ 1.34
SDCCAG3-209ENST00000468963 CLTCQ00610 1675 aaKnown RBP23.42■■□□□ 1.34
SDCCAG3-209ENST00000468963 PTPRTO14522 1441 aa23.42■■□□□ 1.34
SDCCAG3-209ENST00000468963 PTPRKQ15262 1439 aa23.42■■□□□ 1.34
SDCCAG3-209ENST00000468963 KIF3BO15066 747 aa23.41■■□□□ 1.34
SDCCAG3-209ENST00000468963 TSPY4P0CV99 314 aa23.41■■□□□ 1.34
SDCCAG3-209ENST00000468963 TSPY10P0CW01 314 aa23.41■■□□□ 1.34
SDCCAG3-209ENST00000468963 NCOA1Q15788 1441 aa23.38■■□□□ 1.33
SDCCAG3-209ENST00000468963 ARHGEF5Q12774 1597 aa23.38■■□□□ 1.33
SDCCAG3-209ENST00000468963 MIA2Q96PC5 1412 aa23.33■■□□□ 1.32
SDCCAG3-209ENST00000468963 CAMSAP1Q5T5Y3 1602 aa23.32■■□□□ 1.32
SDCCAG3-209ENST00000468963 NCKAP5LQ9HCH0 1330 aa23.32■■□□□ 1.32
SDCCAG3-209ENST00000468963 FBXO31Q5XUX0 539 aaPredicted RBP23.31■■□□□ 1.32
SDCCAG3-209ENST00000468963 MYOM3Q5VTT5 1437 aa23.31■■□□□ 1.32
SDCCAG3-209ENST00000468963 WASHC2CQ9Y4E1 1318 aa23.3■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms