RNA–Protein interactions for RNA: ENST00000468894.1

XRN1-207, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-207ENST00000468894 CRISPLD2Q9H0B8 497 aa13.94□□□□□ -0.18
XRN1-207ENST00000468894 SCUBE2Q9NQ36 999 aa13.92□□□□□ -0.18
XRN1-207ENST00000468894 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.92□□□□□ -0.18
XRN1-207ENST00000468894 MAMSTRQ6ZN01 415 aa13.91□□□□□ -0.18
XRN1-207ENST00000468894 KIF3CO14782 793 aa13.9□□□□□ -0.18
XRN1-207ENST00000468894 OTUD5Q96G74 571 aa13.89□□□□□ -0.19
XRN1-207ENST00000468894 C2orf72A6NCS6 295 aa13.88□□□□□ -0.19
XRN1-207ENST00000468894 GPHNQ9NQX3 736 aaPredicted RBP13.87□□□□□ -0.19
XRN1-207ENST00000468894 KDM2AQ9Y2K7 1162 aa13.87□□□□□ -0.19
XRN1-207ENST00000468894 TMC2Q8TDI7 906 aa13.86□□□□□ -0.19
XRN1-207ENST00000468894 PDE4AP27815 886 aa13.85□□□□□ -0.19
XRN1-207ENST00000468894 MFSD10Q14728 455 aa13.84□□□□□ -0.19
XRN1-207ENST00000468894 VSIG10Q8N0Z9 540 aa13.84□□□□□ -0.19
XRN1-207ENST00000468894 LARP6Q9BRS8 491 aaKnown RBP13.84□□□□□ -0.19
XRN1-207ENST00000468894 SLAIN1Q8ND83 568 aa13.83□□□□□ -0.2
XRN1-207ENST00000468894 DSG2Q14126 1118 aa13.8□□□□□ -0.2
XRN1-207ENST00000468894 DDX27Q96GQ7 796 aaKnown RBP13.8□□□□□ -0.2
XRN1-207ENST00000468894 FOXK1P85037 733 aa13.79□□□□□ -0.2
XRN1-207ENST00000468894 PPP1R15BQ5SWA1 713 aa13.78□□□□□ -0.2
XRN1-207ENST00000468894 PLPP6Q8IY26 295 aa13.74□□□□□ -0.21
XRN1-207ENST00000468894 WDR70Q9NW82 654 aa13.73□□□□□ -0.21
XRN1-207ENST00000468894 CAMK2BQ13554 666 aa13.67□□□□□ -0.22
XRN1-207ENST00000468894 E2F4Q16254 413 aa13.66□□□□□ -0.22
XRN1-207ENST00000468894 HOXB3P14651 431 aaPredicted RBP13.65□□□□□ -0.22
XRN1-207ENST00000468894 KCNV2Q8TDN2 545 aa13.64□□□□□ -0.23
XRN1-207ENST00000468894 EMILIN3Q9NT22 766 aa13.63□□□□□ -0.23
XRN1-207ENST00000468894 SLC34A2O95436 690 aa13.6□□□□□ -0.23
XRN1-207ENST00000468894 DOK7Q18PE1 504 aa13.58□□□□□ -0.24
XRN1-207ENST00000468894 P3H3Q8IVL6 736 aa13.58□□□□□ -0.24
XRN1-207ENST00000468894 OXER1Q8TDS5 423 aa13.58□□□□□ -0.24
XRN1-207ENST00000468894 UPF1Q92900 1129 aaKnown RBP eCLIP13.57□□□□□ -0.24
XRN1-207ENST00000468894 SNPHO15079 494 aa13.56□□□□□ -0.24
XRN1-207ENST00000468894 PTCD2Q8WV60 388 aaKnown RBP13.56□□□□□ -0.24
XRN1-207ENST00000468894 ARIH1Q9Y4X5 557 aaPredicted RBP13.54□□□□□ -0.24
XRN1-207ENST00000468894 DPYSL4O14531 572 aa13.52□□□□□ -0.25
XRN1-207ENST00000468894 PCDHGA4Q9Y5G9 962 aa13.52□□□□□ -0.25
XRN1-207ENST00000468894 RIMBP2O15034 1052 aa13.5□□□□□ -0.25
XRN1-207ENST00000468894 ZNF710Q8N1W2 664 aa13.5□□□□□ -0.25
XRN1-207ENST00000468894 ARHGEF1Q92888 912 aaKnown RBP13.5□□□□□ -0.25
XRN1-207ENST00000468894 ZSWIM6Q9HCJ5 1215 aa13.5□□□□□ -0.25
XRN1-207ENST00000468894 GPR153Q6NV75 609 aa13.49□□□□□ -0.25
XRN1-207ENST00000468894 ARSIQ5FYB1 569 aa13.47□□□□□ -0.25
XRN1-207ENST00000468894 KHSRPQ92945 711 aaKnown RBP eCLIP13.47□□□□□ -0.25
XRN1-207ENST00000468894 MAP3K9P80192 1104 aa13.46□□□□□ -0.25
XRN1-207ENST00000468894 ST18O60284 1047 aa13.44□□□□□ -0.26
XRN1-207ENST00000468894 TBC1D12O60347 775 aa13.44□□□□□ -0.26
XRN1-207ENST00000468894 PDIA6Q15084 440 aa13.44□□□□□ -0.26
XRN1-207ENST00000468894 LCE2DQ5TA82 110 aaPredicted RBP13.44□□□□□ -0.26
XRN1-207ENST00000468894 KDM4FA0A1W2PPD8 638 aa13.43□□□□□ -0.26
XRN1-207ENST00000468894 HOXB1P14653 301 aaPredicted RBP13.43□□□□□ -0.26
XRN1-207ENST00000468894 NUDT7P0C024 238 aa13.42□□□□□ -0.26
XRN1-207ENST00000468894 EVI5O60447 810 aa13.41□□□□□ -0.26
XRN1-207ENST00000468894 FAM163AQ96GL9 167 aaPredicted RBP13.41□□□□□ -0.26
XRN1-207ENST00000468894 SPDYE16A6NNV3 312 aaPredicted RBP13.38□□□□□ -0.27
XRN1-207ENST00000468894 ANO8Q9HCE9 1232 aaPredicted RBP13.36□□□□□ -0.27
XRN1-207ENST00000468894 ZNF316A6NFI3 1004 aaPredicted RBP13.35□□□□□ -0.27
XRN1-207ENST00000468894 SEMA3EO15041 775 aa13.34□□□□□ -0.27
XRN1-207ENST00000468894 MARVELD3Q96A59 401 aa13.33□□□□□ -0.28
XRN1-207ENST00000468894 NBR1Q14596 966 aa13.31□□□□□ -0.28
XRN1-207ENST00000468894 LHX6Q9UPM6 363 aa13.31□□□□□ -0.28
XRN1-207ENST00000468894 MLLT3P42568 568 aaPredicted RBP13.29□□□□□ -0.28
XRN1-207ENST00000468894 PTGER2P43116 358 aa13.29□□□□□ -0.28
XRN1-207ENST00000468894 EMP3P54852 163 aa13.29□□□□□ -0.28
XRN1-207ENST00000468894 TESPA1A2RU30 521 aaPredicted RBP13.28□□□□□ -0.28
XRN1-207ENST00000468894 DDX12PQ92771 950 aa13.27□□□□□ -0.29
XRN1-207ENST00000468894 BCANQ96GW7 911 aa13.25□□□□□ -0.29
XRN1-207ENST00000468894 JPH4Q96JJ6 628 aa13.25□□□□□ -0.29
XRN1-207ENST00000468894 FOSBP53539 338 aa13.24□□□□□ -0.29
XRN1-207ENST00000468894 PCDHGA10Q9Y5H3 936 aa13.23□□□□□ -0.29
XRN1-207ENST00000468894 ERBB3P21860 1342 aa13.22□□□□□ -0.29
XRN1-207ENST00000468894 GRXCR2A6NFK2 248 aa13.22□□□□□ -0.29
XRN1-207ENST00000468894 PHF14O94880 888 aa13.22□□□□□ -0.29
XRN1-207ENST00000468894 ZNF454Q8N9F8 522 aa13.22□□□□□ -0.29
XRN1-207ENST00000468894 FAM205CA6NFA0 338 aa13.21□□□□□ -0.29
XRN1-207ENST00000468894 VARS2Q5ST30 1063 aaKnown RBP13.21□□□□□ -0.29
XRN1-207ENST00000468894 POTEB3A0JP26 581 aa13.2□□□□□ -0.3
XRN1-207ENST00000468894 POTEBQ6S5H4 581 aa13.2□□□□□ -0.3
XRN1-207ENST00000468894 PSDA5PKW4 1024 aaPredicted RBP13.19□□□□□ -0.3
XRN1-207ENST00000468894 PRIM1P49642 420 aaKnown RBP13.19□□□□□ -0.3
XRN1-207ENST00000468894 OSBPP22059 807 aa13.18□□□□□ -0.3
XRN1-207ENST00000468894 HS3ST6Q96QI5 342 aa13.18□□□□□ -0.3
XRN1-207ENST00000468894 PPP4R3BQ5MIZ7 849 aa13.17□□□□□ -0.3
XRN1-207ENST00000468894 TYW1BQ6NUM6 668 aa13.17□□□□□ -0.3
XRN1-207ENST00000468894 EPAS1Q99814 870 aa13.17□□□□□ -0.3
XRN1-207ENST00000468894 ZDHHC16Q969W1 377 aa13.15□□□□□ -0.3
XRN1-207ENST00000468894 FBXW7Q969H0 707 aa13.14□□□□□ -0.31
XRN1-207ENST00000468894 ADAM33Q9BZ11 813 aa13.14□□□□□ -0.31
XRN1-207ENST00000468894 EN1Q05925 392 aaPredicted RBP13.13□□□□□ -0.31
XRN1-207ENST00000468894 SMYD5Q6GMV2 418 aa13.13□□□□□ -0.31
XRN1-207ENST00000468894 POTEGQ6S5H5 508 aa13.11□□□□□ -0.31
XRN1-207ENST00000468894 RBM33Q96EV2 1170 aaKnown RBP13.11□□□□□ -0.31
XRN1-207ENST00000468894 POTEMA6NI47 508 aa13.1□□□□□ -0.31
XRN1-207ENST00000468894 RBM26Q5T8P6 1007 aaKnown RBP13.1□□□□□ -0.31
XRN1-207ENST00000468894 BCL2L12Q9HB09 334 aa13.1□□□□□ -0.31
XRN1-207ENST00000468894 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.09□□□□□ -0.31
XRN1-207ENST00000468894 ZNF687Q8N1G0 1237 aa13.09□□□□□ -0.31
XRN1-207ENST00000468894 TULP1O00294 542 aaPredicted RBP13.08□□□□□ -0.32
XRN1-207ENST00000468894 MAP3K7O43318 606 aa13.08□□□□□ -0.32
XRN1-207ENST00000468894 TSR1Q2NL82 804 aaKnown RBP13.08□□□□□ -0.32
XRN1-207ENST00000468894 POTEEQ6S8J3 1075 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms