RNA–Protein interactions for RNA: ENST00000468658.1

CACNA2D3-203, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 3, humanhuman

TSL 1 (best)

Gene CACNA2D3, Length 1,826 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D3-203ENST00000468658 MSH5O43196 834 aa9.3□□□□□ -0.92
CACNA2D3-203ENST00000468658 FAM50AQ14320 339 aaKnown RBP9.3□□□□□ -0.92
CACNA2D3-203ENST00000468658 TCOF1Q13428 1488 aaKnown RBP9.29□□□□□ -0.92
CACNA2D3-203ENST00000468658 PTPRKQ15262 1439 aa9.29□□□□□ -0.92
CACNA2D3-203ENST00000468658 GRIN2BQ13224 1484 aa9.29□□□□□ -0.92
CACNA2D3-203ENST00000468658 MYOM3Q5VTT5 1437 aa9.28□□□□□ -0.92
CACNA2D3-203ENST00000468658 UGGT2Q9NYU1 1516 aa9.28□□□□□ -0.92
CACNA2D3-203ENST00000468658 TRIM52Q96A61 297 aa9.28□□□□□ -0.92
CACNA2D3-203ENST00000468658 WDR62O43379 1518 aa9.28□□□□□ -0.92
CACNA2D3-203ENST00000468658 FBXO3Q9UK99 471 aa9.27□□□□□ -0.93
CACNA2D3-203ENST00000468658 CNTLNQ9NXG0 1405 aa9.27□□□□□ -0.93
CACNA2D3-203ENST00000468658 DENND4BO75064 1496 aaPredicted RBP9.25□□□□□ -0.93
CACNA2D3-203ENST00000468658 CDK11AQ9UQ88 783 aaPredicted RBP9.25□□□□□ -0.93
CACNA2D3-203ENST00000468658 PPP4R2Q9NY27 417 aa9.24□□□□□ -0.93
CACNA2D3-203ENST00000468658 TOPBP1Q92547 1522 aa9.24□□□□□ -0.93
CACNA2D3-203ENST00000468658 POLA1P09884 1462 aaPredicted RBP9.24□□□□□ -0.93
CACNA2D3-203ENST00000468658 NCOA1Q15788 1441 aa9.23□□□□□ -0.93
CACNA2D3-203ENST00000468658 ERICH6Q7L0X2 663 aa9.22□□□□□ -0.93
CACNA2D3-203ENST00000468658 MTUS2Q5JR59 1369 aa9.22□□□□□ -0.93
CACNA2D3-203ENST00000468658 WASHC2AQ641Q2 1341 aa9.22□□□□□ -0.93
CACNA2D3-203ENST00000468658 HNRNPUQ00839 825 aaKnown RBP eCLIP9.21□□□□□ -0.93
CACNA2D3-203ENST00000468658 PKD2Q13563 968 aa9.21□□□□□ -0.93
CACNA2D3-203ENST00000468658 HOMEZQ8IX15 550 aa9.21□□□□□ -0.93
CACNA2D3-203ENST00000468658 HIRIP3Q9BW71 556 aaPredicted RBP9.21□□□□□ -0.94
CACNA2D3-203ENST00000468658 ZBED9Q6R2W3 1325 aa9.2□□□□□ -0.94
CACNA2D3-203ENST00000468658 URB2Q14146 1524 aaKnown RBP9.2□□□□□ -0.94
CACNA2D3-203ENST00000468658 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.19□□□□□ -0.94
CACNA2D3-203ENST00000468658 MAGI3Q5TCQ9 1506 aa9.19□□□□□ -0.94
CACNA2D3-203ENST00000468658 RAD54L2Q9Y4B4 1467 aa9.19□□□□□ -0.94
CACNA2D3-203ENST00000468658 MIA2Q96PC5 1412 aa9.19□□□□□ -0.94
CACNA2D3-203ENST00000468658 KDM6BO15054 1643 aa9.19□□□□□ -0.94
CACNA2D3-203ENST00000468658 HSPA5P11021 654 aaKnown RBP9.19□□□□□ -0.94
CACNA2D3-203ENST00000468658 CCDC7Q96M83 1385 aa9.19□□□□□ -0.94
CACNA2D3-203ENST00000468658 OSCARQ8IYS5 282 aa9.18□□□□□ -0.94
CACNA2D3-203ENST00000468658 BBXQ8WY36 941 aaPredicted RBP9.18□□□□□ -0.94
CACNA2D3-203ENST00000468658 ATF5Q9Y2D1 282 aaPredicted RBP9.18□□□□□ -0.94
CACNA2D3-203ENST00000468658 TEX14Q8IWB6 1497 aa9.18□□□□□ -0.94
CACNA2D3-203ENST00000468658 PAXIP1Q6ZW49 1069 aaPredicted RBP9.17□□□□□ -0.94
CACNA2D3-203ENST00000468658 HOXD11P31277 338 aaPredicted RBP9.17□□□□□ -0.94
CACNA2D3-203ENST00000468658 VASPP50552 380 aaPredicted RBP9.17□□□□□ -0.94
CACNA2D3-203ENST00000468658 EIF4G2P78344 907 aaKnown RBP eCLIP9.17□□□□□ -0.94
CACNA2D3-203ENST00000468658 SPATA31E1Q6ZUB1 1445 aa9.16□□□□□ -0.94
CACNA2D3-203ENST00000468658 SMG6Q86US8 1419 aaKnown RBP9.16□□□□□ -0.94
CACNA2D3-203ENST00000468658 RPRD2Q5VT52 1461 aaKnown RBP9.16□□□□□ -0.94
CACNA2D3-203ENST00000468658 IFNLR1Q8IU57 520 aaPredicted RBP9.16□□□□□ -0.94
CACNA2D3-203ENST00000468658 P3H3Q8IVL6 736 aa9.15□□□□□ -0.94
CACNA2D3-203ENST00000468658 PRKRIP1Q9H875 184 aaPredicted RBP9.15□□□□□ -0.94
CACNA2D3-203ENST00000468658 RNF123Q5XPI4 1314 aa9.15□□□□□ -0.94
CACNA2D3-203ENST00000468658 DNMT1P26358 1616 aaKnown RBP9.15□□□□□ -0.94
CACNA2D3-203ENST00000468658 ROCK1Q13464 1354 aa9.15□□□□□ -0.95
CACNA2D3-203ENST00000468658 IFT140Q96RY7 1462 aa9.14□□□□□ -0.95
CACNA2D3-203ENST00000468658 CFAP44Q96MT7 982 aa9.14□□□□□ -0.95
CACNA2D3-203ENST00000468658 MBD5Q9P267 1494 aa9.13□□□□□ -0.95
CACNA2D3-203ENST00000468658 ANKRD30BQ9BXX2 1392 aa9.12□□□□□ -0.95
CACNA2D3-203ENST00000468658 KIF14Q15058 1648 aa9.12□□□□□ -0.95
CACNA2D3-203ENST00000468658 EPRSP07814 1512 aaKnown RBP9.11□□□□□ -0.95
CACNA2D3-203ENST00000468658 NPM1P06748 294 aaKnown RBP eCLIP9.11□□□□□ -0.95
CACNA2D3-203ENST00000468658 IRX6P78412 446 aaPredicted RBP9.11□□□□□ -0.95
CACNA2D3-203ENST00000468658 TMEM132AQ24JP5 1023 aa9.11□□□□□ -0.95
CACNA2D3-203ENST00000468658 CCDC184Q52MB2 194 aa9.11□□□□□ -0.95
CACNA2D3-203ENST00000468658 ATP1B4Q9UN42 357 aaPredicted RBP9.11□□□□□ -0.95
CACNA2D3-203ENST00000468658 GAPVD1Q14C86 1478 aa9.11□□□□□ -0.95
CACNA2D3-203ENST00000468658 ADGBQ8N7X0 1667 aa9.1□□□□□ -0.95
CACNA2D3-203ENST00000468658 DHX29Q7Z478 1369 aaKnown RBP9.1□□□□□ -0.95
CACNA2D3-203ENST00000468658 PBRM1Q86U86 1689 aa9.09□□□□□ -0.95
CACNA2D3-203ENST00000468658 NOP58Q9Y2X3 529 aaKnown RBP9.09□□□□□ -0.95
CACNA2D3-203ENST00000468658 IQGAP2Q13576 1575 aa9.09□□□□□ -0.95
CACNA2D3-203ENST00000468658 TARBP1Q13395 1621 aaKnown RBP9.09□□□□□ -0.95
CACNA2D3-203ENST00000468658 BCORL1Q5H9F3 1711 aa9.08□□□□□ -0.96
CACNA2D3-203ENST00000468658 KDM5CP41229 1560 aa9.08□□□□□ -0.96
CACNA2D3-203ENST00000468658 DAPK1P53355 1430 aa9.08□□□□□ -0.96
CACNA2D3-203ENST00000468658 ARID4BQ4LE39 1312 aaPredicted RBP9.08□□□□□ -0.96
CACNA2D3-203ENST00000468658 C11orf95C9JLR9 678 aaPredicted RBP9.08□□□□□ -0.96
CACNA2D3-203ENST00000468658 DEKP35659 375 aaKnown RBP9.08□□□□□ -0.96
CACNA2D3-203ENST00000468658 L3MBTL2Q969R5 705 aa9.08□□□□□ -0.96
CACNA2D3-203ENST00000468658 MPHOSPH9Q99550 1183 aa9.08□□□□□ -0.96
CACNA2D3-203ENST00000468658 MRS2Q9HD23 443 aa9.08□□□□□ -0.96
CACNA2D3-203ENST00000468658 KIF7Q2M1P5 1343 aa9.08□□□□□ -0.96
CACNA2D3-203ENST00000468658 E9PCH4 1651 aa9.07□□□□□ -0.96
CACNA2D3-203ENST00000468658 CROCC2H7BZ55 1655 aa9.07□□□□□ -0.96
CACNA2D3-203ENST00000468658 ZNF608Q9ULD9 1512 aaPredicted RBP9.07□□□□□ -0.96
CACNA2D3-203ENST00000468658 ADAMTS12P58397 1594 aa9.07□□□□□ -0.96
CACNA2D3-203ENST00000468658 B4GALNT3Q6L9W6 998 aa9.06□□□□□ -0.96
CACNA2D3-203ENST00000468658 NUDCQ9Y266 331 aa9.06□□□□□ -0.96
CACNA2D3-203ENST00000468658 NBPF8Q3BBV2 869 aa9.05□□□□□ -0.96
CACNA2D3-203ENST00000468658 PZPP20742 1482 aa9.05□□□□□ -0.96
CACNA2D3-203ENST00000468658 ITSN2Q9NZM3 1697 aa9.05□□□□□ -0.96
CACNA2D3-203ENST00000468658 RRP7BPQ9NSQ0 103 aa9.05□□□□□ -0.96
CACNA2D3-203ENST00000468658 ADGRL2O95490 1459 aa9.05□□□□□ -0.96
CACNA2D3-203ENST00000468658 ABCC5O15440 1437 aa9.05□□□□□ -0.96
CACNA2D3-203ENST00000468658 CDK13Q14004 1512 aaKnown RBP9.04□□□□□ -0.96
CACNA2D3-203ENST00000468658 NBR1Q14596 966 aa9.04□□□□□ -0.96
CACNA2D3-203ENST00000468658 ADCY10Q96PN6 1610 aa9.04□□□□□ -0.96
CACNA2D3-203ENST00000468658 UHRF1BP1Q6BDS2 1440 aa9.04□□□□□ -0.96
CACNA2D3-203ENST00000468658 ROCK2O75116 1388 aaKnown RBP9.04□□□□□ -0.96
CACNA2D3-203ENST00000468658 ARHGEF12Q9NZN5 1544 aa9.04□□□□□ -0.96
CACNA2D3-203ENST00000468658 FAM9BQ8IZU0 186 aa9.03□□□□□ -0.96
CACNA2D3-203ENST00000468658 PROM2Q8N271 834 aa9.03□□□□□ -0.96
CACNA2D3-203ENST00000468658 KTN1Q86UP2 1357 aaKnown RBP9.03□□□□□ -0.96
CACNA2D3-203ENST00000468658 RALGAPBQ86X10 1494 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms