RNA–Protein interactions for RNA: ENST00000468480.5

RNF6-204, Transcript of ring finger protein 6, humanhuman

TSL 1 (best)

Gene RNF6, Length 1,105 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6-204ENST00000468480 EFCAB5A4FU69 1503 aa25.79■■□□□ 1.72
RNF6-204ENST00000468480 HECW1Q76N89 1606 aa25.79■■□□□ 1.72
RNF6-204ENST00000468480 POGZQ7Z3K3 1410 aa25.78■■□□□ 1.72
RNF6-204ENST00000468480 PREX1Q8TCU6 1659 aa25.76■■□□□ 1.71
RNF6-204ENST00000468480 STRCQ7RTU9 1775 aa25.74■■□□□ 1.71
RNF6-204ENST00000468480 MAGI2Q86UL8 1455 aa25.71■■□□□ 1.71
RNF6-204ENST00000468480 ARHGEF12Q9NZN5 1544 aa25.7■■□□□ 1.7
RNF6-204ENST00000468480 PLEKHD1A6NEE1 506 aa25.7■■□□□ 1.7
RNF6-204ENST00000468480 MLECQ14165 292 aa25.7■■□□□ 1.7
RNF6-204ENST00000468480 ILDR2Q71H61 639 aa25.7■■□□□ 1.7
RNF6-204ENST00000468480 PCGF6Q9BYE7 350 aa25.7■■□□□ 1.7
RNF6-204ENST00000468480 RANGAP1P46060 587 aaPredicted RBP25.68■■□□□ 1.7
RNF6-204ENST00000468480 CDK13Q14004 1512 aaKnown RBP25.65■■□□□ 1.7
RNF6-204ENST00000468480 SCAPERQ9BY12 1400 aa25.63■■□□□ 1.69
RNF6-204ENST00000468480 DISP3Q9P2K9 1392 aa25.62■■□□□ 1.69
RNF6-204ENST00000468480 VPS8Q8N3P4 1428 aa25.62■■□□□ 1.69
RNF6-204ENST00000468480 MYO5CQ9NQX4 1742 aa25.61■■□□□ 1.69
RNF6-204ENST00000468480 ATP10AO60312 1499 aa25.6■■□□□ 1.69
RNF6-204ENST00000468480 SETD1BQ9UPS6 1966 aaKnown RBP25.59■■□□□ 1.69
RNF6-204ENST00000468480 PLCH2O75038 1416 aa25.58■■□□□ 1.69
RNF6-204ENST00000468480 C9orf84Q5VXU9 1444 aa25.58■■□□□ 1.69
RNF6-204ENST00000468480 CEBPAP49715 358 aaPredicted RBP25.58■■□□□ 1.69
RNF6-204ENST00000468480 SOCS7O14512 581 aa25.56■■□□□ 1.68
RNF6-204ENST00000468480 SPATA31D1Q6ZQQ2 1576 aa25.53■■□□□ 1.68
RNF6-204ENST00000468480 APLP2Q06481 763 aa25.52■■□□□ 1.68
RNF6-204ENST00000468480 KIF14Q15058 1648 aa25.52■■□□□ 1.68
RNF6-204ENST00000468480 C3P01024 1663 aa25.52■■□□□ 1.68
RNF6-204ENST00000468480 KDM5CP41229 1560 aa25.49■■□□□ 1.67
RNF6-204ENST00000468480 DIP2CQ9Y2E4 1556 aa25.48■■□□□ 1.67
RNF6-204ENST00000468480 UHRF1BP1Q6BDS2 1440 aa25.47■■□□□ 1.67
RNF6-204ENST00000468480 ABCA6Q8N139 1617 aa25.45■■□□□ 1.67
RNF6-204ENST00000468480 DMRT2Q9Y5R5 561 aa25.44■■□□□ 1.66
RNF6-204ENST00000468480 LTBP4Q8N2S1 1624 aa25.44■■□□□ 1.66
RNF6-204ENST00000468480 LRRIQ1Q96JM4 1722 aa25.43■■□□□ 1.66
RNF6-204ENST00000468480 ZNF518AQ6AHZ1 1483 aa25.43■■□□□ 1.66
RNF6-204ENST00000468480 REREQ9P2R6 1566 aa25.42■■□□□ 1.66
RNF6-204ENST00000468480 CDC42BPBQ9Y5S2 1711 aa25.42■■□□□ 1.66
RNF6-204ENST00000468480 PTPRTO14522 1441 aa25.41■■□□□ 1.66
RNF6-204ENST00000468480 EFCAB2Q5VUJ9 269 aa25.41■■□□□ 1.66
RNF6-204ENST00000468480 ARHGAP35Q9NRY4 1499 aa25.39■■□□□ 1.65
RNF6-204ENST00000468480 ARHGAP5Q13017 1502 aa25.38■■□□□ 1.65
RNF6-204ENST00000468480 AFAP1Q8N556 730 aa25.38■■□□□ 1.65
RNF6-204ENST00000468480 ITSN2Q9NZM3 1697 aa25.32■■□□□ 1.64
RNF6-204ENST00000468480 AGLP35573 1532 aa25.31■■□□□ 1.64
RNF6-204ENST00000468480 TROQ12816 1431 aaPredicted RBP25.3■■□□□ 1.64
RNF6-204ENST00000468480 IQSEC2Q5JU85 1478 aa25.3■■□□□ 1.64
RNF6-204ENST00000468480 MLH3Q9UHC1 1453 aa25.3■■□□□ 1.64
RNF6-204ENST00000468480 KIDINS220Q9ULH0 1771 aa25.3■■□□□ 1.64
RNF6-204ENST00000468480 NCOA1Q15788 1441 aa25.29■■□□□ 1.64
RNF6-204ENST00000468480 ATP1B4Q9UN42 357 aaPredicted RBP25.29■■□□□ 1.64
RNF6-204ENST00000468480 PREX2Q70Z35 1606 aa25.29■■□□□ 1.64
RNF6-204ENST00000468480 FMN1Q68DA7 1419 aa25.28■■□□□ 1.64
RNF6-204ENST00000468480 ABCC1P33527 1531 aa25.27■■□□□ 1.64
RNF6-204ENST00000468480 TRAPPC8Q9Y2L5 1435 aa25.27■■□□□ 1.64
RNF6-204ENST00000468480 PPARGC1BQ86YN6 1023 aaKnown RBP25.26■■□□□ 1.63
RNF6-204ENST00000468480 MYT1LQ9UL68 1186 aa25.25■■□□□ 1.63
RNF6-204ENST00000468480 CAMSAP1Q5T5Y3 1602 aa25.24■■□□□ 1.63
RNF6-204ENST00000468480 HRCP23327 699 aa25.24■■□□□ 1.63
RNF6-204ENST00000468480 MROH2AA6NES4 1674 aa25.23■■□□□ 1.63
RNF6-204ENST00000468480 CDC42BPAQ5VT25 1732 aa25.23■■□□□ 1.63
RNF6-204ENST00000468480 CDK11AQ9UQ88 783 aaPredicted RBP25.22■■□□□ 1.63
RNF6-204ENST00000468480 MAP3K1Q13233 1512 aa25.22■■□□□ 1.63
RNF6-204ENST00000468480 SUPT6HQ7KZ85 1726 aaKnown RBP25.19■■□□□ 1.62
RNF6-204ENST00000468480 CNTLNQ9NXG0 1405 aa25.16■■□□□ 1.62
RNF6-204ENST00000468480 ZNF142P52746 1687 aaPredicted RBP25.16■■□□□ 1.62
RNF6-204ENST00000468480 ESF1Q9H501 851 aaKnown RBP25.15■■□□□ 1.62
RNF6-204ENST00000468480 CLTCQ00610 1675 aaKnown RBP25.14■■□□□ 1.62
RNF6-204ENST00000468480 MYO3AQ8NEV4 1616 aa25.14■■□□□ 1.61
RNF6-204ENST00000468480 NPATQ14207 1427 aa25.13■■□□□ 1.61
RNF6-204ENST00000468480 SAMD9LQ8IVG5 1584 aa25.13■■□□□ 1.61
RNF6-204ENST00000468480 ZNF335Q9H4Z2 1342 aaPredicted RBP25.12■■□□□ 1.61
RNF6-204ENST00000468480 FYCO1Q9BQS8 1478 aa25.11■■□□□ 1.61
RNF6-204ENST00000468480 ZEB1P37275 1124 aaPredicted RBP25.11■■□□□ 1.61
RNF6-204ENST00000468480 NCKAP5LQ9HCH0 1330 aa25.11■■□□□ 1.61
RNF6-204ENST00000468480 CASKIN1Q8WXD9 1431 aa25.07■■□□□ 1.6
RNF6-204ENST00000468480 ZMYM3Q14202 1370 aa25.06■■□□□ 1.6
RNF6-204ENST00000468480 UBAP1LF5GYI3 381 aa25.06■■□□□ 1.6
RNF6-204ENST00000468480 CEP170BQ9Y4F5 1589 aaPredicted RBP25.05■■□□□ 1.6
RNF6-204ENST00000468480 SYCP2Q9BX26 1530 aa25.05■■□□□ 1.6
RNF6-204ENST00000468480 TCOF1Q13428 1488 aaKnown RBP25.04■■□□□ 1.6
RNF6-204ENST00000468480 PLXNC1O60486 1568 aa25.04■■□□□ 1.6
RNF6-204ENST00000468480 TIAM1Q13009 1591 aa25.04■■□□□ 1.6
RNF6-204ENST00000468480 PLA2R1Q13018 1463 aa25.03■■□□□ 1.6
RNF6-204ENST00000468480 INO80Q9ULG1 1556 aaPredicted RBP25.01■■□□□ 1.59
RNF6-204ENST00000468480 CCDC18Q5T9S5 1454 aa25.01■■□□□ 1.59
RNF6-204ENST00000468480 ATP7AQ04656 1500 aa24.99■■□□□ 1.59
RNF6-204ENST00000468480 PTPRKQ15262 1439 aa24.99■■□□□ 1.59
RNF6-204ENST00000468480 MED1Q15648 1581 aaPredicted RBP24.98■■□□□ 1.59
RNF6-204ENST00000468480 POLR1AO95602 1720 aaPredicted RBP24.95■■□□□ 1.59
RNF6-204ENST00000468480 PKD2Q13563 968 aa24.95■■□□□ 1.58
RNF6-204ENST00000468480 DNMT1P26358 1616 aaKnown RBP24.94■■□□□ 1.58
RNF6-204ENST00000468480 SPAG9O60271 1321 aaKnown RBP24.93■■□□□ 1.58
RNF6-204ENST00000468480 GPATCH8Q9UKJ3 1502 aaKnown RBP24.93■■□□□ 1.58
RNF6-204ENST00000468480 ZNF777Q9ULD5 760 aaPredicted RBP24.93■■□□□ 1.58
RNF6-204ENST00000468480 LRRC9Q6ZRR7 1453 aa24.93■■□□□ 1.58
RNF6-204ENST00000468480 A2MP01023 1474 aa24.92■■□□□ 1.58
RNF6-204ENST00000468480 HNRNPMP52272 730 aaKnown RBP eCLIP24.92■■□□□ 1.58
RNF6-204ENST00000468480 ADGBQ8N7X0 1667 aa24.91■■□□□ 1.58
RNF6-204ENST00000468480 NEURL4Q96JN8 1562 aa24.9■■□□□ 1.58
RNF6-204ENST00000468480 KANK4Q5T7N3 995 aaPredicted RBP24.9■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms