RNA–Protein interactions for RNA: ENST00000468480.5

RNF6-204, Transcript of ring finger protein 6, humanhuman

TSL 1 (best)

Gene RNF6, Length 1,105 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6-204ENST00000468480 NISCHQ9Y2I1 1504 aa38.91■■■■□ 3.82
RNF6-204ENST00000468480 ABCC9O60706 1549 aa35.8■■■■□ 3.32
RNF6-204ENST00000468480 CCDC180Q9P1Z9 1646 aa35.24■■■■□ 3.23
RNF6-204ENST00000468480 DNAJC5BQ9UF47 199 aa34.17■■■■□ 3.06
RNF6-204ENST00000468480 RB1CC1Q8TDY2 1594 aa33.78■■■■□ 3
RNF6-204ENST00000468480 NACADO15069 1562 aa33.38■■■□□ 2.93
RNF6-204ENST00000468480 UNC13AQ9UPW8 1703 aa33.27■■■□□ 2.92
RNF6-204ENST00000468480 PABPN1Q86U42 306 aaKnown RBP eCLIP33.18■■■□□ 2.9
RNF6-204ENST00000468480 DCAF8L2P0C7V8 631 aa32.97■■■□□ 2.87
RNF6-204ENST00000468480 BICRAQ9NZM4 1560 aa32.95■■■□□ 2.86
RNF6-204ENST00000468480 MYO15BQ96JP2 1530 aa32.7■■■□□ 2.83
RNF6-204ENST00000468480 CC2D2AQ9P2K1 1620 aa32.37■■■□□ 2.77
RNF6-204ENST00000468480 CECR2Q9BXF3 1484 aa32.28■■■□□ 2.76
RNF6-204ENST00000468480 SHROOM4Q9ULL8 1493 aa32.25■■■□□ 2.75
RNF6-204ENST00000468480 ZCCHC6Q5VYS8 1495 aaKnown RBP32.12■■■□□ 2.73
RNF6-204ENST00000468480 EIF4G1Q04637 1599 aaKnown RBP32.11■■■□□ 2.73
RNF6-204ENST00000468480 SCRIBQ14160 1630 aa32.08■■■□□ 2.73
RNF6-204ENST00000468480 DCAF1Q9Y4B6 1507 aa32.07■■■□□ 2.72
RNF6-204ENST00000468480 DNAJC5Q9H3Z4 198 aa31.73■■■□□ 2.67
RNF6-204ENST00000468480 CUX2O14529 1486 aa31.06■■■□□ 2.56
RNF6-204ENST00000468480 ERCC6Q03468 1493 aa30.88■■■□□ 2.53
RNF6-204ENST00000468480 NCAPD3P42695 1498 aa30.81■■■□□ 2.52
RNF6-204ENST00000468480 ATAD2BQ9ULI0 1458 aa30.66■■■□□ 2.5
RNF6-204ENST00000468480 NESP48681 1621 aa30.63■■■□□ 2.49
RNF6-204ENST00000468480 HMGXB3Q12766 1538 aa30.57■■■□□ 2.48
RNF6-204ENST00000468480 SMARCA4P51532 1647 aa30.54■■■□□ 2.48
RNF6-204ENST00000468480 SMARCA2P51531 1590 aa30.51■■■□□ 2.47
RNF6-204ENST00000468480 THOC2Q8NI27 1593 aaKnown RBP30.49■■■□□ 2.47
RNF6-204ENST00000468480 BAZ1BQ9UIG0 1483 aaKnown RBP30.31■■■□□ 2.44
RNF6-204ENST00000468480 KIF21AQ7Z4S6 1674 aa30.3■■■□□ 2.44
RNF6-204ENST00000468480 LAMC3Q9Y6N6 1575 aa30.25■■■□□ 2.43
RNF6-204ENST00000468480 PEG3Q9GZU2 1588 aa30.22■■■□□ 2.43
RNF6-204ENST00000468480 BAZ1AQ9NRL2 1556 aaPredicted RBP30.22■■■□□ 2.43
RNF6-204ENST00000468480 TRIM41Q8WV44 630 aa30.07■■■□□ 2.4
RNF6-204ENST00000468480 MROH2BQ7Z745 1585 aa30.02■■■□□ 2.4
RNF6-204ENST00000468480 PDS5BQ9NTI5 1447 aa30■■■□□ 2.39
RNF6-204ENST00000468480 MRC2Q9UBG0 1479 aa29.86■■■□□ 2.37
RNF6-204ENST00000468480 WDR62O43379 1518 aa29.85■■■□□ 2.37
RNF6-204ENST00000468480 CADPSQ9ULU8 1353 aa29.81■■■□□ 2.36
RNF6-204ENST00000468480 WIZO95785 1651 aa29.69■■■□□ 2.34
RNF6-204ENST00000468480 CEP164Q9UPV0 1460 aa29.61■■■□□ 2.33
RNF6-204ENST00000468480 FANCD2Q9BXW9 1451 aa29.53■■■□□ 2.32
RNF6-204ENST00000468480 OSCARQ8IYS5 282 aa29.45■■■□□ 2.31
RNF6-204ENST00000468480 CFTRP13569 1480 aa29.39■■■□□ 2.3
RNF6-204ENST00000468480 URB2Q14146 1524 aaKnown RBP29.39■■■□□ 2.3
RNF6-204ENST00000468480 RIMBP3CA6NJZ7 1639 aa29.34■■■□□ 2.29
RNF6-204ENST00000468480 RIMBP3BA6NNM3 1639 aa29.34■■■□□ 2.29
RNF6-204ENST00000468480 RIMBP3Q9UFD9 1639 aa29.34■■■□□ 2.29
RNF6-204ENST00000468480 PRDM2Q13029 1718 aa29.23■■■□□ 2.27
RNF6-204ENST00000468480 TOP2AP11388 1531 aaKnown RBP29.17■■■□□ 2.26
RNF6-204ENST00000468480 ARHGEF11O15085 1522 aa29.13■■■□□ 2.25
RNF6-204ENST00000468480 ZNF608Q9ULD9 1512 aaPredicted RBP29.13■■■□□ 2.25
RNF6-204ENST00000468480 RSF1Q96T23 1441 aaPredicted RBP29.11■■■□□ 2.25
RNF6-204ENST00000468480 IFT140Q96RY7 1462 aa29.01■■■□□ 2.23
RNF6-204ENST00000468480 EIF4G3O43432 1585 aaKnown RBP28.96■■■□□ 2.23
RNF6-204ENST00000468480 CHD1O14646 1710 aa28.94■■■□□ 2.22
RNF6-204ENST00000468480 TOPBP1Q92547 1522 aa28.93■■■□□ 2.22
RNF6-204ENST00000468480 SUPT5HO00267 1087 aaKnown RBP28.87■■■□□ 2.21
RNF6-204ENST00000468480 CYB5RLQ6IPT4 315 aa28.85■■■□□ 2.21
RNF6-204ENST00000468480 CCDC88BA6NC98 1476 aa28.85■■■□□ 2.21
RNF6-204ENST00000468480 ARAP1Q96P48 1450 aa28.81■■■□□ 2.2
RNF6-204ENST00000468480 TARBP1Q13395 1621 aaKnown RBP28.79■■■□□ 2.2
RNF6-204ENST00000468480 DNMBPQ6XZF7 1577 aa28.77■■■□□ 2.2
RNF6-204ENST00000468480 AQRO60306 1485 aaKnown RBP eCLIP28.73■■■□□ 2.19
RNF6-204ENST00000468480 ABCC8Q09428 1581 aa28.71■■■□□ 2.19
RNF6-204ENST00000468480 TRHP20396 242 aaPredicted RBP28.69■■■□□ 2.18
RNF6-204ENST00000468480 POLA1P09884 1462 aaPredicted RBP28.59■■■□□ 2.17
RNF6-204ENST00000468480 FBLN2P98095 1184 aa28.56■■■□□ 2.16
RNF6-204ENST00000468480 RAD54L2Q9Y4B4 1467 aa28.51■■■□□ 2.15
RNF6-204ENST00000468480 CLASP1Q7Z460 1538 aa28.5■■■□□ 2.15
RNF6-204ENST00000468480 SNAPC4Q5SXM2 1469 aa28.43■■■□□ 2.14
RNF6-204ENST00000468480 TDRD9Q8NDG6 1382 aaKnown RBP28.43■■■□□ 2.14
RNF6-204ENST00000468480 SOGA1O94964 1423 aa28.37■■■□□ 2.13
RNF6-204ENST00000468480 SYNJ1O43426 1573 aa28.35■■■□□ 2.13
RNF6-204ENST00000468480 WDR97A6NE52 1622 aa28.35■■■□□ 2.13
RNF6-204ENST00000468480 FGD5Q6ZNL6 1462 aa28.32■■■□□ 2.12
RNF6-204ENST00000468480 MAGI1Q96QZ7 1491 aaPredicted RBP28.28■■■□□ 2.12
RNF6-204ENST00000468480 AEBP2Q6ZN18 517 aaPredicted RBP28.26■■■□□ 2.11
RNF6-204ENST00000468480 CUX1P39880 1505 aa28.24■■■□□ 2.11
RNF6-204ENST00000468480 PBRM1Q86U86 1689 aa28.23■■■□□ 2.11
RNF6-204ENST00000468480 CHMP7Q8WUX9 453 aaPredicted RBP28.23■■■□□ 2.11
RNF6-204ENST00000468480 GRIN2BQ13224 1484 aa28.21■■■□□ 2.11
RNF6-204ENST00000468480 SYNJ2O15056 1496 aa28.21■■■□□ 2.11
RNF6-204ENST00000468480 GAPVD1Q14C86 1478 aa28.16■■■□□ 2.1
RNF6-204ENST00000468480 ERCC6L2Q5T890 1561 aa28.07■■■□□ 2.08
RNF6-204ENST00000468480 ABCA5Q8WWZ7 1642 aa28.04■■■□□ 2.08
RNF6-204ENST00000468480 ABCA10Q8WWZ4 1543 aa27.94■■■□□ 2.06
RNF6-204ENST00000468480 KIF13AQ9H1H9 1805 aa27.92■■■□□ 2.06
RNF6-204ENST00000468480 CEP170Q5SW79 1584 aa27.9■■■□□ 2.06
RNF6-204ENST00000468480 GRIN2AQ12879 1464 aa27.89■■■□□ 2.06
RNF6-204ENST00000468480 ADAMTS12P58397 1594 aa27.86■■■□□ 2.05
RNF6-204ENST00000468480 SHROOM2Q13796 1616 aa27.85■■■□□ 2.05
RNF6-204ENST00000468480 NUP160Q12769 1436 aa27.82■■■□□ 2.04
RNF6-204ENST00000468480 CHIC1Q5VXU3 224 aa27.78■■■□□ 2.04
RNF6-204ENST00000468480 BIVM-ERCC5R4GMW8 1640 aa27.65■■■□□ 2.02
RNF6-204ENST00000468480 FHAD1B1AJZ9 1412 aa27.64■■■□□ 2.02
RNF6-204ENST00000468480 WRNQ14191 1432 aaPredicted RBP eCLIP27.64■■■□□ 2.02
RNF6-204ENST00000468480 TOP2BQ02880 1626 aa27.6■■■□□ 2.01
RNF6-204ENST00000468480 ERICH3Q5RHP9 1530 aa27.57■■■□□ 2
RNF6-204ENST00000468480 PRG4Q92954 1404 aaPredicted RBP27.57■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 170 ms