RNA–Protein interactions for RNA: ENST00000467847.1

TRIM56-203, Transcript of tripartite motif containing 56, humanhuman

TSL 2

Gene TRIM56, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-203ENST00000467847 SCAPERQ9BY12 1400 aa28.4■■■□□ 2.14
TRIM56-203ENST00000467847 MAGI2Q86UL8 1455 aa28.4■■■□□ 2.14
TRIM56-203ENST00000467847 POGZQ7Z3K3 1410 aa28.39■■■□□ 2.14
TRIM56-203ENST00000467847 YEATS2Q9ULM3 1422 aa28.39■■■□□ 2.14
TRIM56-203ENST00000467847 KIF14Q15058 1648 aa28.39■■■□□ 2.13
TRIM56-203ENST00000467847 LRRIQ1Q96JM4 1722 aa28.37■■■□□ 2.13
TRIM56-203ENST00000467847 SIGLEC1Q9BZZ2 1709 aa28.36■■■□□ 2.13
TRIM56-203ENST00000467847 EFCAB2Q5VUJ9 269 aa28.35■■■□□ 2.13
TRIM56-203ENST00000467847 TROQ12816 1431 aaPredicted RBP28.35■■■□□ 2.13
TRIM56-203ENST00000467847 LMTK3Q96Q04 1460 aa28.34■■■□□ 2.13
TRIM56-203ENST00000467847 CLIP1P30622 1438 aa28.33■■■□□ 2.13
TRIM56-203ENST00000467847 PLPPR3Q6T4P5 718 aa28.3■■■□□ 2.12
TRIM56-203ENST00000467847 ARHGAP5Q13017 1502 aa28.28■■■□□ 2.12
TRIM56-203ENST00000467847 FER1L4A9Z1Z3 1794 aa28.26■■■□□ 2.11
TRIM56-203ENST00000467847 HSPA2P54652 639 aa28.25■■■□□ 2.11
TRIM56-203ENST00000467847 MLECQ14165 292 aa28.25■■■□□ 2.11
TRIM56-203ENST00000467847 ATP10AO60312 1499 aa28.25■■■□□ 2.11
TRIM56-203ENST00000467847 ZNF518AQ6AHZ1 1483 aa28.24■■■□□ 2.11
TRIM56-203ENST00000467847 CASKIN1Q8WXD9 1431 aa28.24■■■□□ 2.11
TRIM56-203ENST00000467847 CCDC18Q5T9S5 1454 aa28.23■■■□□ 2.11
TRIM56-203ENST00000467847 C9orf84Q5VXU9 1444 aa28.22■■■□□ 2.11
TRIM56-203ENST00000467847 CDC42BPBQ9Y5S2 1711 aa28.21■■■□□ 2.11
TRIM56-203ENST00000467847 KDM5CP41229 1560 aa28.19■■■□□ 2.1
TRIM56-203ENST00000467847 AFAP1Q8N556 730 aa28.17■■■□□ 2.1
TRIM56-203ENST00000467847 PREX2Q70Z35 1606 aa28.17■■■□□ 2.1
TRIM56-203ENST00000467847 CERKQ8TCT0 537 aa28.16■■■□□ 2.1
TRIM56-203ENST00000467847 ARHGEF12Q9NZN5 1544 aa28.16■■■□□ 2.1
TRIM56-203ENST00000467847 FYCO1Q9BQS8 1478 aa28.14■■■□□ 2.09
TRIM56-203ENST00000467847 MYT1LQ9UL68 1186 aa28.13■■■□□ 2.09
TRIM56-203ENST00000467847 DIP2CQ9Y2E4 1556 aa28.1■■■□□ 2.09
TRIM56-203ENST00000467847 ABCC1P33527 1531 aa28.09■■■□□ 2.09
TRIM56-203ENST00000467847 CDC42BPAQ5VT25 1732 aa28.09■■■□□ 2.09
TRIM56-203ENST00000467847 ITSN2Q9NZM3 1697 aa28.08■■■□□ 2.09
TRIM56-203ENST00000467847 ABCA6Q8N139 1617 aa28.07■■■□□ 2.08
TRIM56-203ENST00000467847 MLH3Q9UHC1 1453 aa28.06■■■□□ 2.08
TRIM56-203ENST00000467847 REREQ9P2R6 1566 aa28.05■■■□□ 2.08
TRIM56-203ENST00000467847 TRAPPC8Q9Y2L5 1435 aa28.05■■■□□ 2.08
TRIM56-203ENST00000467847 PREX1Q8TCU6 1659 aa28.03■■■□□ 2.08
TRIM56-203ENST00000467847 CEBPAP49715 358 aaPredicted RBP28■■■□□ 2.07
TRIM56-203ENST00000467847 DISP3Q9P2K9 1392 aa27.98■■■□□ 2.07
TRIM56-203ENST00000467847 KIDINS220Q9ULH0 1771 aa27.97■■■□□ 2.07
TRIM56-203ENST00000467847 ZNF777Q9ULD5 760 aaPredicted RBP27.96■■■□□ 2.07
TRIM56-203ENST00000467847 AGLP35573 1532 aa27.95■■■□□ 2.06
TRIM56-203ENST00000467847 SAMD9LQ8IVG5 1584 aa27.94■■■□□ 2.06
TRIM56-203ENST00000467847 GPATCH8Q9UKJ3 1502 aaKnown RBP27.94■■■□□ 2.06
TRIM56-203ENST00000467847 DMRT2Q9Y5R5 561 aa27.92■■■□□ 2.06
TRIM56-203ENST00000467847 SYCP2Q9BX26 1530 aa27.92■■■□□ 2.06
TRIM56-203ENST00000467847 SETD1BQ9UPS6 1966 aaKnown RBP27.91■■■□□ 2.06
TRIM56-203ENST00000467847 C3P01024 1663 aa27.9■■■□□ 2.06
TRIM56-203ENST00000467847 ESF1Q9H501 851 aaKnown RBP27.89■■■□□ 2.06
TRIM56-203ENST00000467847 UHRF1BP1Q6BDS2 1440 aa27.88■■■□□ 2.05
TRIM56-203ENST00000467847 MTUS2Q5JR59 1369 aa27.86■■■□□ 2.05
TRIM56-203ENST00000467847 CCNB3Q8WWL7 1395 aa27.86■■■□□ 2.05
TRIM56-203ENST00000467847 CFDP1Q9UEE9 299 aaPredicted RBP27.86■■■□□ 2.05
TRIM56-203ENST00000467847 SOCS7O14512 581 aa27.85■■■□□ 2.05
TRIM56-203ENST00000467847 HNRNPMP52272 730 aaKnown RBP eCLIP27.85■■■□□ 2.05
TRIM56-203ENST00000467847 ILDR2Q71H61 639 aa27.85■■■□□ 2.05
TRIM56-203ENST00000467847 SPAG9O60271 1321 aaKnown RBP27.85■■■□□ 2.05
TRIM56-203ENST00000467847 PLEKHH2Q8IVE3 1493 aa27.83■■■□□ 2.05
TRIM56-203ENST00000467847 KIAA1107Q9UPP5 1409 aa27.82■■■□□ 2.04
TRIM56-203ENST00000467847 STRCQ7RTU9 1775 aa27.81■■■□□ 2.04
TRIM56-203ENST00000467847 CNTLNQ9NXG0 1405 aa27.81■■■□□ 2.04
TRIM56-203ENST00000467847 ATP7AQ04656 1500 aa27.81■■■□□ 2.04
TRIM56-203ENST00000467847 SUPT6HQ7KZ85 1726 aaKnown RBP27.8■■■□□ 2.04
TRIM56-203ENST00000467847 INO80Q9ULG1 1556 aaPredicted RBP27.78■■■□□ 2.04
TRIM56-203ENST00000467847 EHBP1L1Q8N3D4 1523 aa27.77■■■□□ 2.04
TRIM56-203ENST00000467847 TIAM1Q13009 1591 aa27.76■■■□□ 2.03
TRIM56-203ENST00000467847 CEP162Q5TB80 1403 aa27.75■■■□□ 2.03
TRIM56-203ENST00000467847 MROH2AA6NES4 1674 aa27.75■■■□□ 2.03
TRIM56-203ENST00000467847 PLXNC1O60486 1568 aa27.73■■■□□ 2.03
TRIM56-203ENST00000467847 A2MP01023 1474 aa27.71■■■□□ 2.03
TRIM56-203ENST00000467847 ZNF644Q9H582 1327 aaPredicted RBP27.69■■■□□ 2.02
TRIM56-203ENST00000467847 ADGBQ8N7X0 1667 aa27.68■■■□□ 2.02
TRIM56-203ENST00000467847 CLTCQ00610 1675 aaKnown RBP27.68■■■□□ 2.02
TRIM56-203ENST00000467847 NPATQ14207 1427 aa27.67■■■□□ 2.02
TRIM56-203ENST00000467847 ZMYM3Q14202 1370 aa27.67■■■□□ 2.02
TRIM56-203ENST00000467847 SPATA31D1Q6ZQQ2 1576 aa27.67■■■□□ 2.02
TRIM56-203ENST00000467847 PTPRTO14522 1441 aa27.66■■■□□ 2.02
TRIM56-203ENST00000467847 MBD5Q9P267 1494 aa27.64■■■□□ 2.01
TRIM56-203ENST00000467847 GGT6Q6P531 493 aa27.62■■■□□ 2.01
TRIM56-203ENST00000467847 NCOA1Q15788 1441 aa27.6■■■□□ 2.01
TRIM56-203ENST00000467847 NCOA2Q15596 1464 aa27.58■■■□□ 2.01
TRIM56-203ENST00000467847 RTEL1-TNFRSF6BF6WH68 1400 aa27.58■■■□□ 2
TRIM56-203ENST00000467847 CAMSAP1Q5T5Y3 1602 aa27.57■■■□□ 2
TRIM56-203ENST00000467847 MYO3AQ8NEV4 1616 aa27.56■■■□□ 2
TRIM56-203ENST00000467847 CAMSAP2Q08AD1 1489 aa27.55■■■□□ 2
TRIM56-203ENST00000467847 ZNF142P52746 1687 aaPredicted RBP27.54■■■□□ 2
TRIM56-203ENST00000467847 PTPRKQ15262 1439 aa27.54■■■□□ 2
TRIM56-203ENST00000467847 CCDC141Q6ZP82 1450 aa27.54■■■□□ 2
TRIM56-203ENST00000467847 PPP6R1Q9UPN7 881 aa27.54■■■□□ 2
TRIM56-203ENST00000467847 IQSEC2Q5JU85 1478 aa27.51■■■□□ 2
TRIM56-203ENST00000467847 DHX29Q7Z478 1369 aaKnown RBP27.51■■□□□ 1.99
TRIM56-203ENST00000467847 LTBP4Q8N2S1 1624 aa27.5■■□□□ 1.99
TRIM56-203ENST00000467847 CEP170BQ9Y4F5 1589 aaPredicted RBP27.49■■□□□ 1.99
TRIM56-203ENST00000467847 RSPH4AQ5TD94 716 aa27.47■■□□□ 1.99
TRIM56-203ENST00000467847 VPS8Q8N3P4 1428 aa27.47■■□□□ 1.99
TRIM56-203ENST00000467847 NCKAP5LQ9HCH0 1330 aa27.45■■□□□ 1.99
TRIM56-203ENST00000467847 LOC105371045A0A1W2PR82 267 aa27.45■■□□□ 1.98
TRIM56-203ENST00000467847 KIF3BO15066 747 aa27.44■■□□□ 1.98
TRIM56-203ENST00000467847 PLA2R1Q13018 1463 aa27.44■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 6.7 ms