RNA–Protein interactions for RNA: ENST00000467349.1

MRPL53-203, Transcript of mitochondrial ribosomal protein L53, humanhuman

TSL 2

Gene MRPL53, Length 451 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL53-203ENST00000467349 MAGI2Q86UL8 1455 aa26.61■■□□□ 1.85
MRPL53-203ENST00000467349 UHRF1BP1Q6BDS2 1440 aa26.59■■□□□ 1.85
MRPL53-203ENST00000467349 LTBP4Q8N2S1 1624 aa26.59■■□□□ 1.85
MRPL53-203ENST00000467349 NUP153P49790 1475 aaKnown RBP26.59■■□□□ 1.85
MRPL53-203ENST00000467349 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.57■■□□□ 1.84
MRPL53-203ENST00000467349 SETD1BQ9UPS6 1966 aaKnown RBP26.57■■□□□ 1.84
MRPL53-203ENST00000467349 PTPRTO14522 1441 aa26.56■■□□□ 1.84
MRPL53-203ENST00000467349 PRXQ9BXM0 1461 aa26.56■■□□□ 1.84
MRPL53-203ENST00000467349 SAMD9Q5K651 1589 aa26.56■■□□□ 1.84
MRPL53-203ENST00000467349 IQSEC2Q5JU85 1478 aa26.52■■□□□ 1.84
MRPL53-203ENST00000467349 ATP10AO60312 1499 aa26.51■■□□□ 1.83
MRPL53-203ENST00000467349 C9orf84Q5VXU9 1444 aa26.5■■□□□ 1.83
MRPL53-203ENST00000467349 PLEKHD1A6NEE1 506 aa26.5■■□□□ 1.83
MRPL53-203ENST00000467349 SCAPERQ9BY12 1400 aa26.48■■□□□ 1.83
MRPL53-203ENST00000467349 C3P01024 1663 aa26.43■■□□□ 1.82
MRPL53-203ENST00000467349 UBAP1LF5GYI3 381 aa26.38■■□□□ 1.81
MRPL53-203ENST00000467349 NCOA1Q15788 1441 aa26.36■■□□□ 1.81
MRPL53-203ENST00000467349 RANGAP1P46060 587 aaPredicted RBP26.35■■□□□ 1.81
MRPL53-203ENST00000467349 PLCH2O75038 1416 aa26.33■■□□□ 1.81
MRPL53-203ENST00000467349 MED1Q15648 1581 aaPredicted RBP26.31■■□□□ 1.8
MRPL53-203ENST00000467349 ZNF335Q9H4Z2 1342 aaPredicted RBP26.29■■□□□ 1.8
MRPL53-203ENST00000467349 CDK13Q14004 1512 aaKnown RBP26.28■■□□□ 1.8
MRPL53-203ENST00000467349 DIP2CQ9Y2E4 1556 aa26.28■■□□□ 1.8
MRPL53-203ENST00000467349 MYO5CQ9NQX4 1742 aa26.28■■□□□ 1.8
MRPL53-203ENST00000467349 TRAPPC8Q9Y2L5 1435 aa26.27■■□□□ 1.8
MRPL53-203ENST00000467349 CAMSAP1Q5T5Y3 1602 aa26.27■■□□□ 1.8
MRPL53-203ENST00000467349 MYT1LQ9UL68 1186 aa26.25■■□□□ 1.79
MRPL53-203ENST00000467349 ZNF518AQ6AHZ1 1483 aa26.24■■□□□ 1.79
MRPL53-203ENST00000467349 KDM5CP41229 1560 aa26.24■■□□□ 1.79
MRPL53-203ENST00000467349 EFCAB2Q5VUJ9 269 aa26.22■■□□□ 1.79
MRPL53-203ENST00000467349 ESF1Q9H501 851 aaKnown RBP26.22■■□□□ 1.79
MRPL53-203ENST00000467349 ABCA6Q8N139 1617 aa26.21■■□□□ 1.79
MRPL53-203ENST00000467349 AFAP1Q8N556 730 aa26.21■■□□□ 1.79
MRPL53-203ENST00000467349 REREQ9P2R6 1566 aa26.2■■□□□ 1.79
MRPL53-203ENST00000467349 NCKAP5LQ9HCH0 1330 aa26.2■■□□□ 1.79
MRPL53-203ENST00000467349 HSPA1LP34931 641 aa26.17■■□□□ 1.78
MRPL53-203ENST00000467349 SCAF1Q9H7N4 1312 aaKnown RBP26.16■■□□□ 1.78
MRPL53-203ENST00000467349 AGLP35573 1532 aa26.14■■□□□ 1.78
MRPL53-203ENST00000467349 KIF14Q15058 1648 aa26.12■■□□□ 1.77
MRPL53-203ENST00000467349 ARHGAP5Q13017 1502 aa26.12■■□□□ 1.77
MRPL53-203ENST00000467349 SUPT6HQ7KZ85 1726 aaKnown RBP26.11■■□□□ 1.77
MRPL53-203ENST00000467349 PIP4K2BP78356 416 aa26.11■■□□□ 1.77
MRPL53-203ENST00000467349 CNTLNQ9NXG0 1405 aa26.09■■□□□ 1.77
MRPL53-203ENST00000467349 PHF23Q9BUL5 403 aaPredicted RBP26.09■■□□□ 1.77
MRPL53-203ENST00000467349 MLH3Q9UHC1 1453 aa26.07■■□□□ 1.76
MRPL53-203ENST00000467349 CSRNP3Q8WYN3 585 aa26.07■■□□□ 1.76
MRPL53-203ENST00000467349 NPATQ14207 1427 aa26.06■■□□□ 1.76
MRPL53-203ENST00000467349 MROH2AA6NES4 1674 aa26.06■■□□□ 1.76
MRPL53-203ENST00000467349 ZNF142P52746 1687 aaPredicted RBP26.04■■□□□ 1.76
MRPL53-203ENST00000467349 MYO3AQ8NEV4 1616 aa26.03■■□□□ 1.76
MRPL53-203ENST00000467349 PLA2R1Q13018 1463 aa26.03■■□□□ 1.76
MRPL53-203ENST00000467349 PKD2Q13563 968 aa26.01■■□□□ 1.75
MRPL53-203ENST00000467349 ATP1B4Q9UN42 357 aaPredicted RBP26.01■■□□□ 1.75
MRPL53-203ENST00000467349 CDC42BPBQ9Y5S2 1711 aa26■■□□□ 1.75
MRPL53-203ENST00000467349 TCOF1Q13428 1488 aaKnown RBP26■■□□□ 1.75
MRPL53-203ENST00000467349 KIDINS220Q9ULH0 1771 aa26■■□□□ 1.75
MRPL53-203ENST00000467349 PPP6R1Q9UPN7 881 aa25.99■■□□□ 1.75
MRPL53-203ENST00000467349 CEP170BQ9Y4F5 1589 aaPredicted RBP25.99■■□□□ 1.75
MRPL53-203ENST00000467349 ZMYM3Q14202 1370 aa25.98■■□□□ 1.75
MRPL53-203ENST00000467349 ITSN2Q9NZM3 1697 aa25.97■■□□□ 1.75
MRPL53-203ENST00000467349 TOM1O60784 492 aa25.96■■□□□ 1.75
MRPL53-203ENST00000467349 ABCC1P33527 1531 aa25.95■■□□□ 1.74
MRPL53-203ENST00000467349 CLTCQ00610 1675 aaKnown RBP25.95■■□□□ 1.74
MRPL53-203ENST00000467349 TROQ12816 1431 aaPredicted RBP25.92■■□□□ 1.74
MRPL53-203ENST00000467349 CDK11AQ9UQ88 783 aaPredicted RBP25.92■■□□□ 1.74
MRPL53-203ENST00000467349 CPS1P31327 1500 aa25.88■■□□□ 1.73
MRPL53-203ENST00000467349 PREX2Q70Z35 1606 aa25.88■■□□□ 1.73
MRPL53-203ENST00000467349 CLIP1P30622 1438 aa25.88■■□□□ 1.73
MRPL53-203ENST00000467349 SENP3Q9H4L4 574 aaPredicted RBP25.87■■□□□ 1.73
MRPL53-203ENST00000467349 PTPRKQ15262 1439 aa25.87■■□□□ 1.73
MRPL53-203ENST00000467349 POLR1AO95602 1720 aaPredicted RBP25.84■■□□□ 1.73
MRPL53-203ENST00000467349 LRRIQ1Q96JM4 1722 aa25.83■■□□□ 1.73
MRPL53-203ENST00000467349 ALKQ9UM73 1620 aa25.83■■□□□ 1.73
MRPL53-203ENST00000467349 SHANK2Q9UPX8 1470 aa25.83■■□□□ 1.73
MRPL53-203ENST00000467349 FMN1Q68DA7 1419 aa25.81■■□□□ 1.72
MRPL53-203ENST00000467349 SAMD9LQ8IVG5 1584 aa25.81■■□□□ 1.72
MRPL53-203ENST00000467349 DNMT1P26358 1616 aaKnown RBP25.81■■□□□ 1.72
MRPL53-203ENST00000467349 NEURL4Q96JN8 1562 aa25.8■■□□□ 1.72
MRPL53-203ENST00000467349 A2ML1A8K2U0 1454 aa25.78■■□□□ 1.72
MRPL53-203ENST00000467349 CDC42BPAQ5VT25 1732 aa25.76■■□□□ 1.71
MRPL53-203ENST00000467349 RGS17Q9UGC6 210 aaPredicted RBP25.75■■□□□ 1.71
MRPL53-203ENST00000467349 VWDEQ8N2E2 1590 aa25.73■■□□□ 1.71
MRPL53-203ENST00000467349 EEA1Q15075 1411 aa25.72■■□□□ 1.71
MRPL53-203ENST00000467349 GGT6Q6P531 493 aa25.72■■□□□ 1.71
MRPL53-203ENST00000467349 PLXNC1O60486 1568 aa25.72■■□□□ 1.71
MRPL53-203ENST00000467349 SPAG9O60271 1321 aaKnown RBP25.7■■□□□ 1.71
MRPL53-203ENST00000467349 SYCP2Q9BX26 1530 aa25.7■■□□□ 1.7
MRPL53-203ENST00000467349 ARHGAP35Q9NRY4 1499 aa25.69■■□□□ 1.7
MRPL53-203ENST00000467349 ATP7AQ04656 1500 aa25.68■■□□□ 1.7
MRPL53-203ENST00000467349 ZNF777Q9ULD5 760 aaPredicted RBP25.68■■□□□ 1.7
MRPL53-203ENST00000467349 A2MP01023 1474 aa25.67■■□□□ 1.7
MRPL53-203ENST00000467349 INO80Q9ULG1 1556 aaPredicted RBP25.65■■□□□ 1.7
MRPL53-203ENST00000467349 EHMT2Q96KQ7 1210 aa25.63■■□□□ 1.69
MRPL53-203ENST00000467349 STRCP1A6NGW2 1772 aa25.62■■□□□ 1.69
MRPL53-203ENST00000467349 HNRNPMP52272 730 aaKnown RBP eCLIP25.62■■□□□ 1.69
MRPL53-203ENST00000467349 RNF17Q9BXT8 1623 aaKnown RBP25.61■■□□□ 1.69
MRPL53-203ENST00000467349 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.59■■□□□ 1.69
MRPL53-203ENST00000467349 TNRQ92752 1358 aa25.58■■□□□ 1.69
MRPL53-203ENST00000467349 ANKLE2Q86XL3 938 aa25.58■■□□□ 1.69
MRPL53-203ENST00000467349 NPHP4O75161 1426 aaPredicted RBP25.57■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms