RNA–Protein interactions for RNA: ENST00000467288.6

GMDS-203, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 5

Gene GMDS, Length 900 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-203ENST00000467288 SCAPERQ9BY12 1400 aa31.21■■■□□ 2.59
GMDS-203ENST00000467288 ARID4BQ4LE39 1312 aaPredicted RBP31.19■■■□□ 2.58
GMDS-203ENST00000467288 ZMYM4Q5VZL5 1548 aa31.19■■■□□ 2.58
GMDS-203ENST00000467288 ARHGAP5Q13017 1502 aa31.17■■■□□ 2.58
GMDS-203ENST00000467288 POGZQ7Z3K3 1410 aa31.15■■■□□ 2.58
GMDS-203ENST00000467288 ARHGEF40Q8TER5 1519 aa31.14■■■□□ 2.57
GMDS-203ENST00000467288 CDC42BPBQ9Y5S2 1711 aa31.13■■■□□ 2.57
GMDS-203ENST00000467288 PREX2Q70Z35 1606 aa31.13■■■□□ 2.57
GMDS-203ENST00000467288 MAGI2Q86UL8 1455 aa31.12■■■□□ 2.57
GMDS-203ENST00000467288 PTPRMP28827 1452 aa31.11■■■□□ 2.57
GMDS-203ENST00000467288 ZFYVE16Q7Z3T8 1539 aa31.08■■■□□ 2.57
GMDS-203ENST00000467288 CDC42BPAQ5VT25 1732 aa31.07■■■□□ 2.56
GMDS-203ENST00000467288 YEATS2Q9ULM3 1422 aa31.07■■■□□ 2.56
GMDS-203ENST00000467288 MTUS2Q5JR59 1369 aa31.05■■■□□ 2.56
GMDS-203ENST00000467288 ADAMTSL3P82987 1691 aa31.05■■■□□ 2.56
GMDS-203ENST00000467288 GPATCH8Q9UKJ3 1502 aaKnown RBP31.03■■■□□ 2.56
GMDS-203ENST00000467288 ZNF518AQ6AHZ1 1483 aa31.02■■■□□ 2.56
GMDS-203ENST00000467288 ABCC1P33527 1531 aa31■■■□□ 2.55
GMDS-203ENST00000467288 KDM5CP41229 1560 aa31■■■□□ 2.55
GMDS-203ENST00000467288 VPS8Q8N3P4 1428 aa30.99■■■□□ 2.55
GMDS-203ENST00000467288 AFAP1Q8N556 730 aa30.99■■■□□ 2.55
GMDS-203ENST00000467288 EHBP1L1Q8N3D4 1523 aa30.98■■■□□ 2.55
GMDS-203ENST00000467288 BCORL1Q5H9F3 1711 aa30.98■■■□□ 2.55
GMDS-203ENST00000467288 ARHGEF12Q9NZN5 1544 aa30.98■■■□□ 2.55
GMDS-203ENST00000467288 CCNB3Q8WWL7 1395 aa30.94■■■□□ 2.54
GMDS-203ENST00000467288 TRAPPC8Q9Y2L5 1435 aa30.94■■■□□ 2.54
GMDS-203ENST00000467288 ATP10AO60312 1499 aa30.93■■■□□ 2.54
GMDS-203ENST00000467288 ITSN2Q9NZM3 1697 aa30.93■■■□□ 2.54
GMDS-203ENST00000467288 SIGLEC1Q9BZZ2 1709 aa30.92■■■□□ 2.54
GMDS-203ENST00000467288 SAMD9LQ8IVG5 1584 aa30.92■■■□□ 2.54
GMDS-203ENST00000467288 MADDQ8WXG6 1647 aa30.91■■■□□ 2.54
GMDS-203ENST00000467288 MLH3Q9UHC1 1453 aa30.9■■■□□ 2.54
GMDS-203ENST00000467288 TIAM1Q13009 1591 aa30.89■■■□□ 2.54
GMDS-203ENST00000467288 CFDP1Q9UEE9 299 aaPredicted RBP30.89■■■□□ 2.54
GMDS-203ENST00000467288 ZNF777Q9ULD5 760 aaPredicted RBP30.89■■■□□ 2.54
GMDS-203ENST00000467288 C9orf84Q5VXU9 1444 aa30.89■■■□□ 2.53
GMDS-203ENST00000467288 MLECQ14165 292 aa30.88■■■□□ 2.53
GMDS-203ENST00000467288 PLPPR3Q6T4P5 718 aa30.88■■■□□ 2.53
GMDS-203ENST00000467288 KIAA1107Q9UPP5 1409 aa30.84■■■□□ 2.53
GMDS-203ENST00000467288 SYCP2Q9BX26 1530 aa30.83■■■□□ 2.53
GMDS-203ENST00000467288 PLEKHH2Q8IVE3 1493 aa30.83■■■□□ 2.53
GMDS-203ENST00000467288 DIP2CQ9Y2E4 1556 aa30.83■■■□□ 2.53
GMDS-203ENST00000467288 MYT1LQ9UL68 1186 aa30.82■■■□□ 2.52
GMDS-203ENST00000467288 LMTK3Q96Q04 1460 aa30.81■■■□□ 2.52
GMDS-203ENST00000467288 MAP3K1Q13233 1512 aa30.8■■■□□ 2.52
GMDS-203ENST00000467288 HNRNPMP52272 730 aaKnown RBP eCLIP30.8■■■□□ 2.52
GMDS-203ENST00000467288 SUPT6HQ7KZ85 1726 aaKnown RBP30.8■■■□□ 2.52
GMDS-203ENST00000467288 NCOA2Q15596 1464 aa30.8■■■□□ 2.52
GMDS-203ENST00000467288 REREQ9P2R6 1566 aa30.79■■■□□ 2.52
GMDS-203ENST00000467288 ABCA6Q8N139 1617 aa30.79■■■□□ 2.52
GMDS-203ENST00000467288 LRRC9Q6ZRR7 1453 aa30.78■■■□□ 2.52
GMDS-203ENST00000467288 HSPA2P54652 639 aa30.78■■■□□ 2.52
GMDS-203ENST00000467288 KIDINS220Q9ULH0 1771 aa30.77■■■□□ 2.52
GMDS-203ENST00000467288 FBXO41Q8TF61 875 aa30.77■■■□□ 2.52
GMDS-203ENST00000467288 RIMS1Q86UR5 1692 aaKnown RBP30.75■■■□□ 2.51
GMDS-203ENST00000467288 ZNF644Q9H582 1327 aaPredicted RBP30.73■■■□□ 2.51
GMDS-203ENST00000467288 SPAG9O60271 1321 aaKnown RBP30.72■■■□□ 2.51
GMDS-203ENST00000467288 KANK4Q5T7N3 995 aaPredicted RBP30.7■■■□□ 2.51
GMDS-203ENST00000467288 MBD5Q9P267 1494 aa30.7■■■□□ 2.5
GMDS-203ENST00000467288 AGLP35573 1532 aa30.69■■■□□ 2.5
GMDS-203ENST00000467288 FER1L4A9Z1Z3 1794 aa30.66■■■□□ 2.5
GMDS-203ENST00000467288 INO80Q9ULG1 1556 aaPredicted RBP30.66■■■□□ 2.5
GMDS-203ENST00000467288 ATP7AQ04656 1500 aa30.65■■■□□ 2.5
GMDS-203ENST00000467288 CEBPAP49715 358 aaPredicted RBP30.64■■■□□ 2.5
GMDS-203ENST00000467288 CAMSAP2Q08AD1 1489 aa30.61■■■□□ 2.49
GMDS-203ENST00000467288 APLP2Q06481 763 aa30.57■■■□□ 2.48
GMDS-203ENST00000467288 RTEL1-TNFRSF6BF6WH68 1400 aa30.56■■■□□ 2.48
GMDS-203ENST00000467288 RSPH4AQ5TD94 716 aa30.56■■■□□ 2.48
GMDS-203ENST00000467288 CCDC141Q6ZP82 1450 aa30.55■■■□□ 2.48
GMDS-203ENST00000467288 A2MP01023 1474 aa30.54■■■□□ 2.48
GMDS-203ENST00000467288 PLXNC1O60486 1568 aa30.53■■■□□ 2.48
GMDS-203ENST00000467288 MYOM3Q5VTT5 1437 aa30.52■■■□□ 2.48
GMDS-203ENST00000467288 MIA2Q96PC5 1412 aa30.51■■■□□ 2.47
GMDS-203ENST00000467288 ARHGEF5Q12774 1597 aa30.5■■■□□ 2.47
GMDS-203ENST00000467288 ADGBQ8N7X0 1667 aa30.49■■■□□ 2.47
GMDS-203ENST00000467288 ESF1Q9H501 851 aaKnown RBP30.44■■■□□ 2.46
GMDS-203ENST00000467288 CNTLNQ9NXG0 1405 aa30.44■■■□□ 2.46
GMDS-203ENST00000467288 CERKQ8TCT0 537 aa30.43■■■□□ 2.46
GMDS-203ENST00000467288 DHX29Q7Z478 1369 aaKnown RBP30.41■■■□□ 2.46
GMDS-203ENST00000467288 TSPY4P0CV99 314 aa30.4■■■□□ 2.46
GMDS-203ENST00000467288 TSPY10P0CW01 314 aa30.4■■■□□ 2.46
GMDS-203ENST00000467288 C3P01024 1663 aa30.39■■■□□ 2.46
GMDS-203ENST00000467288 DMRT2Q9Y5R5 561 aa30.36■■■□□ 2.45
GMDS-203ENST00000467288 UHRF1BP1Q6BDS2 1440 aa30.36■■■□□ 2.45
GMDS-203ENST00000467288 MAST1Q9Y2H9 1570 aa30.36■■■□□ 2.45
GMDS-203ENST00000467288 MROH2AA6NES4 1674 aa30.34■■■□□ 2.45
GMDS-203ENST00000467288 PREX1Q8TCU6 1659 aa30.34■■■□□ 2.45
GMDS-203ENST00000467288 GGT6Q6P531 493 aa30.34■■■□□ 2.45
GMDS-203ENST00000467288 PPP6R1Q9UPN7 881 aa30.33■■■□□ 2.45
GMDS-203ENST00000467288 PTPN23Q9H3S7 1636 aa30.31■■■□□ 2.44
GMDS-203ENST00000467288 SETD1BQ9UPS6 1966 aaKnown RBP30.31■■■□□ 2.44
GMDS-203ENST00000467288 FGD6Q6ZV73 1430 aa30.3■■■□□ 2.44
GMDS-203ENST00000467288 ZMYM3Q14202 1370 aa30.3■■■□□ 2.44
GMDS-203ENST00000467288 CLTCQ00610 1675 aaKnown RBP30.28■■■□□ 2.44
GMDS-203ENST00000467288 TCOF1Q13428 1488 aaKnown RBP30.28■■■□□ 2.44
GMDS-203ENST00000467288 KIF3BO15066 747 aa30.27■■■□□ 2.44
GMDS-203ENST00000467288 ABCC5O15440 1437 aa30.24■■■□□ 2.43
GMDS-203ENST00000467288 NPATQ14207 1427 aa30.24■■■□□ 2.43
GMDS-203ENST00000467288 SHANK2Q9UPX8 1470 aa30.21■■■□□ 2.43
GMDS-203ENST00000467288 FAM135AQ9P2D6 1515 aa30.19■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms