RNA–Protein interactions for RNA: ENST00000466684.5

BRD9-201, Transcript of bromodomain containing 9, humanhuman

TSL 2

Gene BRD9, Length 1,417 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-201ENST00000466684 LMTK3Q96Q04 1460 aa26.9■■□□□ 1.9
BRD9-201ENST00000466684 ARHGAP35Q9NRY4 1499 aa26.9■■□□□ 1.9
BRD9-201ENST00000466684 MYO5CQ9NQX4 1742 aa26.86■■□□□ 1.89
BRD9-201ENST00000466684 EFCAB2Q5VUJ9 269 aa26.86■■□□□ 1.89
BRD9-201ENST00000466684 FBXO41Q8TF61 875 aa26.85■■□□□ 1.89
BRD9-201ENST00000466684 SIGLEC1Q9BZZ2 1709 aa26.84■■□□□ 1.89
BRD9-201ENST00000466684 KIF14Q15058 1648 aa26.82■■□□□ 1.88
BRD9-201ENST00000466684 CHIC1Q5VXU3 224 aa26.82■■□□□ 1.88
BRD9-201ENST00000466684 TROQ12816 1431 aaPredicted RBP26.79■■□□□ 1.88
BRD9-201ENST00000466684 ATP10AO60312 1499 aa26.79■■□□□ 1.88
BRD9-201ENST00000466684 MLECQ14165 292 aa26.79■■□□□ 1.88
BRD9-201ENST00000466684 PLPPR3Q6T4P5 718 aa26.79■■□□□ 1.88
BRD9-201ENST00000466684 CLIP1P30622 1438 aa26.79■■□□□ 1.88
BRD9-201ENST00000466684 FER1L4A9Z1Z3 1794 aa26.77■■□□□ 1.88
BRD9-201ENST00000466684 C9orf84Q5VXU9 1444 aa26.77■■□□□ 1.88
BRD9-201ENST00000466684 ZNF518AQ6AHZ1 1483 aa26.75■■□□□ 1.87
BRD9-201ENST00000466684 ARHGAP5Q13017 1502 aa26.75■■□□□ 1.87
BRD9-201ENST00000466684 HSPA2P54652 639 aa26.73■■□□□ 1.87
BRD9-201ENST00000466684 ARHGEF12Q9NZN5 1544 aa26.72■■□□□ 1.87
BRD9-201ENST00000466684 LRRIQ1Q96JM4 1722 aa26.7■■□□□ 1.87
BRD9-201ENST00000466684 KDM5CP41229 1560 aa26.69■■□□□ 1.86
BRD9-201ENST00000466684 AFAP1Q8N556 730 aa26.66■■□□□ 1.86
BRD9-201ENST00000466684 CCDC18Q5T9S5 1454 aa26.66■■□□□ 1.86
BRD9-201ENST00000466684 MYT1LQ9UL68 1186 aa26.65■■□□□ 1.86
BRD9-201ENST00000466684 CASKIN1Q8WXD9 1431 aa26.64■■□□□ 1.86
BRD9-201ENST00000466684 CDC42BPBQ9Y5S2 1711 aa26.63■■□□□ 1.85
BRD9-201ENST00000466684 PREX2Q70Z35 1606 aa26.61■■□□□ 1.85
BRD9-201ENST00000466684 PREX1Q8TCU6 1659 aa26.6■■□□□ 1.85
BRD9-201ENST00000466684 REREQ9P2R6 1566 aa26.6■■□□□ 1.85
BRD9-201ENST00000466684 DIP2CQ9Y2E4 1556 aa26.6■■□□□ 1.85
BRD9-201ENST00000466684 MLH3Q9UHC1 1453 aa26.59■■□□□ 1.85
BRD9-201ENST00000466684 CEBPAP49715 358 aaPredicted RBP26.56■■□□□ 1.84
BRD9-201ENST00000466684 ABCC1P33527 1531 aa26.56■■□□□ 1.84
BRD9-201ENST00000466684 ABCA6Q8N139 1617 aa26.54■■□□□ 1.84
BRD9-201ENST00000466684 FYCO1Q9BQS8 1478 aa26.54■■□□□ 1.84
BRD9-201ENST00000466684 TRAPPC8Q9Y2L5 1435 aa26.53■■□□□ 1.84
BRD9-201ENST00000466684 ITSN2Q9NZM3 1697 aa26.53■■□□□ 1.84
BRD9-201ENST00000466684 AGLP35573 1532 aa26.51■■□□□ 1.83
BRD9-201ENST00000466684 CERKQ8TCT0 537 aa26.5■■□□□ 1.83
BRD9-201ENST00000466684 CDC42BPAQ5VT25 1732 aa26.5■■□□□ 1.83
BRD9-201ENST00000466684 UHRF1BP1Q6BDS2 1440 aa26.5■■□□□ 1.83
BRD9-201ENST00000466684 ESF1Q9H501 851 aaKnown RBP26.49■■□□□ 1.83
BRD9-201ENST00000466684 SETD1BQ9UPS6 1966 aaKnown RBP26.48■■□□□ 1.83
BRD9-201ENST00000466684 DMRT2Q9Y5R5 561 aa26.47■■□□□ 1.83
BRD9-201ENST00000466684 KIDINS220Q9ULH0 1771 aa26.45■■□□□ 1.82
BRD9-201ENST00000466684 C3P01024 1663 aa26.43■■□□□ 1.82
BRD9-201ENST00000466684 ZNF777Q9ULD5 760 aaPredicted RBP26.42■■□□□ 1.82
BRD9-201ENST00000466684 CNTLNQ9NXG0 1405 aa26.4■■□□□ 1.82
BRD9-201ENST00000466684 STRCQ7RTU9 1775 aa26.4■■□□□ 1.82
BRD9-201ENST00000466684 SAMD9LQ8IVG5 1584 aa26.4■■□□□ 1.82
BRD9-201ENST00000466684 GPATCH8Q9UKJ3 1502 aaKnown RBP26.4■■□□□ 1.82
BRD9-201ENST00000466684 SYCP2Q9BX26 1530 aa26.37■■□□□ 1.81
BRD9-201ENST00000466684 SPAG9O60271 1321 aaKnown RBP26.35■■□□□ 1.81
BRD9-201ENST00000466684 PLEKHH2Q8IVE3 1493 aa26.34■■□□□ 1.81
BRD9-201ENST00000466684 CFDP1Q9UEE9 299 aaPredicted RBP26.33■■□□□ 1.81
BRD9-201ENST00000466684 KIAA1107Q9UPP5 1409 aa26.33■■□□□ 1.81
BRD9-201ENST00000466684 HNRNPMP52272 730 aaKnown RBP eCLIP26.32■■□□□ 1.83e-7■■■■□ 20.9
BRD9-201ENST00000466684 CCNB3Q8WWL7 1395 aa26.32■■□□□ 1.8
BRD9-201ENST00000466684 PTPRTO14522 1441 aa26.31■■□□□ 1.8
BRD9-201ENST00000466684 MROH2AA6NES4 1674 aa26.3■■□□□ 1.8
BRD9-201ENST00000466684 ATP7AQ04656 1500 aa26.29■■□□□ 1.8
BRD9-201ENST00000466684 MTUS2Q5JR59 1369 aa26.29■■□□□ 1.8
BRD9-201ENST00000466684 NPATQ14207 1427 aa26.28■■□□□ 1.8
BRD9-201ENST00000466684 SUPT6HQ7KZ85 1726 aaKnown RBP26.27■■□□□ 1.8
BRD9-201ENST00000466684 INO80Q9ULG1 1556 aaPredicted RBP26.26■■□□□ 1.79
BRD9-201ENST00000466684 ZMYM3Q14202 1370 aa26.25■■□□□ 1.79
BRD9-201ENST00000466684 PLXNC1O60486 1568 aa26.23■■□□□ 1.79
BRD9-201ENST00000466684 A2MP01023 1474 aa26.23■■□□□ 1.79
BRD9-201ENST00000466684 NCOA1Q15788 1441 aa26.23■■□□□ 1.79
BRD9-201ENST00000466684 EHBP1L1Q8N3D4 1523 aa26.19■■□□□ 1.78
BRD9-201ENST00000466684 CLTCQ00610 1675 aaKnown RBP26.19■■□□□ 1.78
BRD9-201ENST00000466684 CAMSAP1Q5T5Y3 1602 aa26.17■■□□□ 1.78
BRD9-201ENST00000466684 TIAM1Q13009 1591 aa26.17■■□□□ 1.78
BRD9-201ENST00000466684 ADGBQ8N7X0 1667 aa26.17■■□□□ 1.78
BRD9-201ENST00000466684 GGT6Q6P531 493 aa26.15■■□□□ 1.78
BRD9-201ENST00000466684 PPP6R1Q9UPN7 881 aa26.15■■□□□ 1.78
BRD9-201ENST00000466684 LTBP4Q8N2S1 1624 aa26.14■■□□□ 1.77
BRD9-201ENST00000466684 ZNF644Q9H582 1327 aaPredicted RBP26.13■■□□□ 1.77
BRD9-201ENST00000466684 CEP162Q5TB80 1403 aa26.13■■□□□ 1.77
BRD9-201ENST00000466684 MBD5Q9P267 1494 aa26.12■■□□□ 1.77
BRD9-201ENST00000466684 PTPRKQ15262 1439 aa26.11■■□□□ 1.77
BRD9-201ENST00000466684 IQSEC2Q5JU85 1478 aa26.11■■□□□ 1.77
BRD9-201ENST00000466684 MYO3AQ8NEV4 1616 aa26.11■■□□□ 1.77
BRD9-201ENST00000466684 RTEL1-TNFRSF6BF6WH68 1400 aa26.11■■□□□ 1.77
BRD9-201ENST00000466684 ZNF142P52746 1687 aaPredicted RBP26.11■■□□□ 1.77
BRD9-201ENST00000466684 CEP170BQ9Y4F5 1589 aaPredicted RBP26.08■■□□□ 1.76
BRD9-201ENST00000466684 PLA2R1Q13018 1463 aa26.07■■□□□ 1.76
BRD9-201ENST00000466684 PKD2Q13563 968 aa26.06■■□□□ 1.76
BRD9-201ENST00000466684 NCKAP5LQ9HCH0 1330 aa26.06■■□□□ 1.76
BRD9-201ENST00000466684 DHX29Q7Z478 1369 aaKnown RBP26.04■■□□□ 1.76
BRD9-201ENST00000466684 CCDC141Q6ZP82 1450 aa26.02■■□□□ 1.76
BRD9-201ENST00000466684 TCOF1Q13428 1488 aaKnown RBP26.01■■□□□ 1.75
BRD9-201ENST00000466684 NCOA2Q15596 1464 aa26.01■■□□□ 1.75
BRD9-201ENST00000466684 RSPH4AQ5TD94 716 aa26.01■■□□□ 1.75
BRD9-201ENST00000466684 DISP3Q9P2K9 1392 aa26.01■■□□□ 1.75
BRD9-201ENST00000466684 CAMSAP2Q08AD1 1489 aa25.99■■□□□ 1.75
BRD9-201ENST00000466684 A2ML1A8K2U0 1454 aa25.98■■□□□ 1.75
BRD9-201ENST00000466684 ZNF335Q9H4Z2 1342 aaPredicted RBP25.98■■□□□ 1.75
BRD9-201ENST00000466684 KIF3BO15066 747 aa25.97■■□□□ 1.75
BRD9-201ENST00000466684 FAM135AQ9P2D6 1515 aa25.97■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms