RNA–Protein interactions for RNA: ENST00000466653.1

ARID4B-208, Transcript of AT-rich interaction domain 4B, humanhuman

TSL 2

Gene ARID4B, Length 2,315 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARID4B-208ENST00000466653 PRG4Q92954 1404 aaPredicted RBP24.72■■□□□ 1.55
ARID4B-208ENST00000466653 ROCK1Q13464 1354 aa24.72■■□□□ 1.55
ARID4B-208ENST00000466653 TROQ12816 1431 aaPredicted RBP24.71■■□□□ 1.55
ARID4B-208ENST00000466653 CDK11AQ9UQ88 783 aaPredicted RBP24.7■■□□□ 1.54
ARID4B-208ENST00000466653 MPHOSPH9Q99550 1183 aa24.68■■□□□ 1.54
ARID4B-208ENST00000466653 JPH4Q96JJ6 628 aa24.66■■□□□ 1.54
ARID4B-208ENST00000466653 KIF14Q15058 1648 aa24.65■■□□□ 1.54
ARID4B-208ENST00000466653 ADCY10Q96PN6 1610 aa24.65■■□□□ 1.54
ARID4B-208ENST00000466653 CARMIL2Q6F5E8 1435 aa24.65■■□□□ 1.54
ARID4B-208ENST00000466653 CAMSAP2Q08AD1 1489 aa24.63■■□□□ 1.53
ARID4B-208ENST00000466653 ITSN2Q9NZM3 1697 aa24.62■■□□□ 1.53
ARID4B-208ENST00000466653 GPATCH8Q9UKJ3 1502 aaKnown RBP24.62■■□□□ 1.53
ARID4B-208ENST00000466653 FOXD1Q16676 465 aa24.61■■□□□ 1.53
ARID4B-208ENST00000466653 ABCA8O94911 1581 aa24.58■■□□□ 1.53
ARID4B-208ENST00000466653 CFDP1Q9UEE9 299 aaPredicted RBP24.56■■□□□ 1.52
ARID4B-208ENST00000466653 ANKRD30BQ9BXX2 1392 aa24.56■■□□□ 1.52
ARID4B-208ENST00000466653 ADGBQ8N7X0 1667 aa24.54■■□□□ 1.52
ARID4B-208ENST00000466653 CROCC2H7BZ55 1655 aa24.53■■□□□ 1.52
ARID4B-208ENST00000466653 CCER2I3L3R5 266 aa24.53■■□□□ 1.52
ARID4B-208ENST00000466653 ANP32CO43423 234 aa24.53■■□□□ 1.52
ARID4B-208ENST00000466653 L3MBTL2Q969R5 705 aa24.52■■□□□ 1.52
ARID4B-208ENST00000466653 NCOA1Q15788 1441 aa24.51■■□□□ 1.51
ARID4B-208ENST00000466653 RPRD2Q5VT52 1461 aaKnown RBP24.51■■□□□ 1.51
ARID4B-208ENST00000466653 ATP10BO94823 1461 aa24.5■■□□□ 1.51
ARID4B-208ENST00000466653 HSPA5P11021 654 aaKnown RBP24.5■■□□□ 1.51
ARID4B-208ENST00000466653 ADGRL2O95490 1459 aa24.5■■□□□ 1.51
ARID4B-208ENST00000466653 SUPT16HQ9Y5B9 1047 aaKnown RBP24.5■■□□□ 1.51
ARID4B-208ENST00000466653 PZPP20742 1482 aa24.49■■□□□ 1.51
ARID4B-208ENST00000466653 ABCC10Q5T3U5 1492 aa24.48■■□□□ 1.51
ARID4B-208ENST00000466653 TEX14Q8IWB6 1497 aa24.48■■□□□ 1.51
ARID4B-208ENST00000466653 CDC42BPAQ5VT25 1732 aa24.48■■□□□ 1.51
ARID4B-208ENST00000466653 ZNF777Q9ULD5 760 aaPredicted RBP24.47■■□□□ 1.51
ARID4B-208ENST00000466653 SLC4A1APQ9BWU0 796 aaKnown RBP24.46■■□□□ 1.51
ARID4B-208ENST00000466653 WASHC2AQ641Q2 1341 aa24.44■■□□□ 1.5
ARID4B-208ENST00000466653 PLEKHD1A6NEE1 506 aa24.43■■□□□ 1.5
ARID4B-208ENST00000466653 EIF4G2P78344 907 aaKnown RBP eCLIP24.41■■□□□ 1.5
ARID4B-208ENST00000466653 NBPF8Q3BBV2 869 aa24.41■■□□□ 1.5
ARID4B-208ENST00000466653 ANKRD30AQ9BXX3 1397 aa24.38■■□□□ 1.49
ARID4B-208ENST00000466653 SHANK2Q9UPX8 1470 aa24.36■■□□□ 1.49
ARID4B-208ENST00000466653 CHD1O14646 1710 aa24.35■■□□□ 1.49
ARID4B-208ENST00000466653 PTPRGP23470 1445 aa24.35■■□□□ 1.49
ARID4B-208ENST00000466653 KIAA1107Q9UPP5 1409 aa24.34■■□□□ 1.49
ARID4B-208ENST00000466653 ANKRD50Q9ULJ7 1429 aa24.33■■□□□ 1.49
ARID4B-208ENST00000466653 C9orf84Q5VXU9 1444 aa24.33■■□□□ 1.48
ARID4B-208ENST00000466653 C11orf95C9JLR9 678 aaPredicted RBP24.32■■□□□ 1.48
ARID4B-208ENST00000466653 MBD5Q9P267 1494 aa24.3■■□□□ 1.48
ARID4B-208ENST00000466653 SPATA31E1Q6ZUB1 1445 aa24.29■■□□□ 1.48
ARID4B-208ENST00000466653 CNTLNQ9NXG0 1405 aa24.29■■□□□ 1.48
ARID4B-208ENST00000466653 CCDC7Q96M83 1385 aa24.28■■□□□ 1.48
ARID4B-208ENST00000466653 PKD2Q13563 968 aa24.28■■□□□ 1.48
ARID4B-208ENST00000466653 ARHGEF5Q12774 1597 aa24.27■■□□□ 1.48
ARID4B-208ENST00000466653 SHROOM2Q13796 1616 aa24.26■■□□□ 1.47
ARID4B-208ENST00000466653 CDC42BPBQ9Y5S2 1711 aa24.25■■□□□ 1.47
ARID4B-208ENST00000466653 SAMD9LQ8IVG5 1584 aa24.24■■□□□ 1.47
ARID4B-208ENST00000466653 PREX2Q70Z35 1606 aa24.23■■□□□ 1.47
ARID4B-208ENST00000466653 HNRNPMP52272 730 aaKnown RBP eCLIP24.23■■□□□ 1.473e-7■■■□□ 17.8
ARID4B-208ENST00000466653 KDM5DQ9BY66 1539 aa24.23■■□□□ 1.47
ARID4B-208ENST00000466653 POLR1AO95602 1720 aaPredicted RBP24.22■■□□□ 1.47
ARID4B-208ENST00000466653 NUP155O75694 1391 aa24.21■■□□□ 1.47
ARID4B-208ENST00000466653 TSPY4P0CV99 314 aa24.2■■□□□ 1.46
ARID4B-208ENST00000466653 TSPY10P0CW01 314 aa24.2■■□□□ 1.46
ARID4B-208ENST00000466653 ERCC6L2Q5T890 1561 aa24.19■■□□□ 1.46
ARID4B-208ENST00000466653 KIF15Q9NS87 1388 aa24.19■■□□□ 1.46
ARID4B-208ENST00000466653 KIF7Q2M1P5 1343 aa24.18■■□□□ 1.46
ARID4B-208ENST00000466653 CCDC141Q6ZP82 1450 aa24.17■■□□□ 1.46
ARID4B-208ENST00000466653 TTC37Q6PGP7 1564 aa24.15■■□□□ 1.46
ARID4B-208ENST00000466653 FKBP8Q14318 412 aa24.14■■□□□ 1.45
ARID4B-208ENST00000466653 OSCARQ8IYS5 282 aa24.13■■□□□ 1.45
ARID4B-208ENST00000466653 CCDC184Q52MB2 194 aa24.12■■□□□ 1.45
ARID4B-208ENST00000466653 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.12■■□□□ 1.452e-6■■■■□ 24.5
ARID4B-208ENST00000466653 PRKRIP1Q9H875 184 aaPredicted RBP24.11■■□□□ 1.45
ARID4B-208ENST00000466653 ABCC2Q92887 1545 aa24.11■■□□□ 1.45
ARID4B-208ENST00000466653 BCORL1Q5H9F3 1711 aa24.11■■□□□ 1.45
ARID4B-208ENST00000466653 UHRF1BP1Q6BDS2 1440 aa24.11■■□□□ 1.45
ARID4B-208ENST00000466653 SYCP2Q9BX26 1530 aa24.1■■□□□ 1.45
ARID4B-208ENST00000466653 KDM5CP41229 1560 aa24.1■■□□□ 1.45
ARID4B-208ENST00000466653 BCANQ96GW7 911 aa24.1■■□□□ 1.45
ARID4B-208ENST00000466653 ZNF326Q5BKZ1 582 aaKnown RBP24.09■■□□□ 1.45
ARID4B-208ENST00000466653 USP47Q96K76 1375 aa24.09■■□□□ 1.45
ARID4B-208ENST00000466653 HNRNPUQ00839 825 aaKnown RBP eCLIP24.08■■□□□ 1.45
ARID4B-208ENST00000466653 ARHGAP5Q13017 1502 aa24.07■■□□□ 1.44
ARID4B-208ENST00000466653 ARHGEF12Q9NZN5 1544 aa24.07■■□□□ 1.44
ARID4B-208ENST00000466653 MAST1Q9Y2H9 1570 aa24.07■■□□□ 1.44
ARID4B-208ENST00000466653 RSPH4AQ5TD94 716 aa24.06■■□□□ 1.44
ARID4B-208ENST00000466653 RALGAPBQ86X10 1494 aa24.06■■□□□ 1.44
ARID4B-208ENST00000466653 FAM135AQ9P2D6 1515 aa24.06■■□□□ 1.44
ARID4B-208ENST00000466653 MYO5CQ9NQX4 1742 aa24.04■■□□□ 1.44
ARID4B-208ENST00000466653 CLASP1Q7Z460 1538 aa24.01■■□□□ 1.43
ARID4B-208ENST00000466653 UNC13BO14795 1591 aa24■■□□□ 1.43
ARID4B-208ENST00000466653 NEFLP07196 543 aa24■■□□□ 1.43
ARID4B-208ENST00000466653 DHX29Q7Z478 1369 aaKnown RBP23.99■■□□□ 1.43
ARID4B-208ENST00000466653 TSHZ2Q9NRE2 1034 aa23.98■■□□□ 1.43
ARID4B-208ENST00000466653 PLXNC1O60486 1568 aa23.97■■□□□ 1.43
ARID4B-208ENST00000466653 ZCCHC11Q5TAX3 1644 aaKnown RBP23.97■■□□□ 1.43
ARID4B-208ENST00000466653 MRS2Q9HD23 443 aa23.96■■□□□ 1.43
ARID4B-208ENST00000466653 PLEKHH2Q8IVE3 1493 aa23.95■■□□□ 1.42
ARID4B-208ENST00000466653 KDM2AQ9Y2K7 1162 aa23.94■■□□□ 1.42
ARID4B-208ENST00000466653 CARD11Q9BXL7 1154 aa23.93■■□□□ 1.42
ARID4B-208ENST00000466653 DCAF11Q8TEB1 546 aa23.93■■□□□ 1.42
ARID4B-208ENST00000466653 UHRF1BP1LA0JNW5 1464 aa23.92■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms