RNA–Protein interactions for RNA: ENST00000466141.1

RPUSD3-212, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 996 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-212ENST00000466141 NUP153P49790 1475 aaKnown RBP11.8□□□□□ -0.52
RPUSD3-212ENST00000466141 SAMD9Q5K651 1589 aa11.79□□□□□ -0.52
RPUSD3-212ENST00000466141 FHOD3Q2V2M9 1422 aa11.79□□□□□ -0.52
RPUSD3-212ENST00000466141 AKNAQ7Z591 1439 aa11.79□□□□□ -0.52
RPUSD3-212ENST00000466141 FANCAO15360 1455 aa11.79□□□□□ -0.52
RPUSD3-212ENST00000466141 POGZQ7Z3K3 1410 aa11.78□□□□□ -0.52
RPUSD3-212ENST00000466141 FER1L4A9Z1Z3 1794 aa11.78□□□□□ -0.52
RPUSD3-212ENST00000466141 ZFYVE16Q7Z3T8 1539 aa11.78□□□□□ -0.52
RPUSD3-212ENST00000466141 FAM9AQ8IZU1 332 aaPredicted RBP11.78□□□□□ -0.52
RPUSD3-212ENST00000466141 ZMYM4Q5VZL5 1548 aa11.77□□□□□ -0.52
RPUSD3-212ENST00000466141 TTC37Q6PGP7 1564 aa11.76□□□□□ -0.53
RPUSD3-212ENST00000466141 RANGAP1P46060 587 aaPredicted RBP11.76□□□□□ -0.53
RPUSD3-212ENST00000466141 ARXQ96QS3 562 aa11.76□□□□□ -0.53
RPUSD3-212ENST00000466141 EFCAB5A4FU69 1503 aa11.76□□□□□ -0.53
RPUSD3-212ENST00000466141 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.76□□□□□ -0.53
RPUSD3-212ENST00000466141 HECW1Q76N89 1606 aa11.75□□□□□ -0.53
RPUSD3-212ENST00000466141 CEBPAP49715 358 aaPredicted RBP11.74□□□□□ -0.53
RPUSD3-212ENST00000466141 CFAP74Q9C0B2 1584 aa11.74□□□□□ -0.53
RPUSD3-212ENST00000466141 STRCQ7RTU9 1775 aa11.73□□□□□ -0.53
RPUSD3-212ENST00000466141 PREX1Q8TCU6 1659 aa11.73□□□□□ -0.53
RPUSD3-212ENST00000466141 ARHGEF12Q9NZN5 1544 aa11.72□□□□□ -0.53
RPUSD3-212ENST00000466141 PLEKHD1A6NEE1 506 aa11.72□□□□□ -0.53
RPUSD3-212ENST00000466141 MAGI2Q86UL8 1455 aa11.7□□□□□ -0.54
RPUSD3-212ENST00000466141 SCAPERQ9BY12 1400 aa11.7□□□□□ -0.54
RPUSD3-212ENST00000466141 CDK13Q14004 1512 aaKnown RBP11.68□□□□□ -0.54
RPUSD3-212ENST00000466141 ATP10AO60312 1499 aa11.68□□□□□ -0.54
RPUSD3-212ENST00000466141 C9orf84Q5VXU9 1444 aa11.68□□□□□ -0.54
RPUSD3-212ENST00000466141 UHRF1BP1Q6BDS2 1440 aa11.66□□□□□ -0.54
RPUSD3-212ENST00000466141 DMRT2Q9Y5R5 561 aa11.65□□□□□ -0.54
RPUSD3-212ENST00000466141 PLCH2O75038 1416 aa11.65□□□□□ -0.54
RPUSD3-212ENST00000466141 LTBP4Q8N2S1 1624 aa11.64□□□□□ -0.55
RPUSD3-212ENST00000466141 PTPRTO14522 1441 aa11.62□□□□□ -0.55
RPUSD3-212ENST00000466141 C3P01024 1663 aa11.61□□□□□ -0.55
RPUSD3-212ENST00000466141 DIP2CQ9Y2E4 1556 aa11.6□□□□□ -0.55
RPUSD3-212ENST00000466141 AFAP1Q8N556 730 aa11.6□□□□□ -0.55
RPUSD3-212ENST00000466141 MYO5CQ9NQX4 1742 aa11.6□□□□□ -0.55
RPUSD3-212ENST00000466141 KIF14Q15058 1648 aa11.6□□□□□ -0.55
RPUSD3-212ENST00000466141 EFCAB2Q5VUJ9 269 aa11.59□□□□□ -0.55
RPUSD3-212ENST00000466141 KDM5CP41229 1560 aa11.58□□□□□ -0.55
RPUSD3-212ENST00000466141 ZNF518AQ6AHZ1 1483 aa11.58□□□□□ -0.56
RPUSD3-212ENST00000466141 ABCA6Q8N139 1617 aa11.58□□□□□ -0.56
RPUSD3-212ENST00000466141 MYT1LQ9UL68 1186 aa11.58□□□□□ -0.56
RPUSD3-212ENST00000466141 ATP1B4Q9UN42 357 aaPredicted RBP11.57□□□□□ -0.56
RPUSD3-212ENST00000466141 NCOA1Q15788 1441 aa11.57□□□□□ -0.56
RPUSD3-212ENST00000466141 ARHGAP5Q13017 1502 aa11.56□□□□□ -0.56
RPUSD3-212ENST00000466141 SETD1BQ9UPS6 1966 aaKnown RBP11.56□□□□□ -0.56
RPUSD3-212ENST00000466141 IQSEC2Q5JU85 1478 aa11.56□□□□□ -0.56
RPUSD3-212ENST00000466141 REREQ9P2R6 1566 aa11.54□□□□□ -0.56
RPUSD3-212ENST00000466141 TRAPPC8Q9Y2L5 1435 aa11.54□□□□□ -0.56
RPUSD3-212ENST00000466141 ZNF335Q9H4Z2 1342 aaPredicted RBP11.54□□□□□ -0.56
RPUSD3-212ENST00000466141 CAMSAP1Q5T5Y3 1602 aa11.53□□□□□ -0.56
RPUSD3-212ENST00000466141 ARHGAP35Q9NRY4 1499 aa11.53□□□□□ -0.56
RPUSD3-212ENST00000466141 NCKAP5LQ9HCH0 1330 aa11.53□□□□□ -0.56
RPUSD3-212ENST00000466141 UBAP1LF5GYI3 381 aa11.52□□□□□ -0.57
RPUSD3-212ENST00000466141 ESF1Q9H501 851 aaKnown RBP11.52□□□□□ -0.57
RPUSD3-212ENST00000466141 MLH3Q9UHC1 1453 aa11.51□□□□□ -0.57
RPUSD3-212ENST00000466141 AGLP35573 1532 aa11.51□□□□□ -0.57
RPUSD3-212ENST00000466141 TROQ12816 1431 aaPredicted RBP11.51□□□□□ -0.57
RPUSD3-212ENST00000466141 CDC42BPBQ9Y5S2 1711 aa11.5□□□□□ -0.57
RPUSD3-212ENST00000466141 ABCC1P33527 1531 aa11.5□□□□□ -0.57
RPUSD3-212ENST00000466141 LRRIQ1Q96JM4 1722 aa11.49□□□□□ -0.57
RPUSD3-212ENST00000466141 SLC4A1APQ9BWU0 796 aaKnown RBP11.48□□□□□ -0.57
RPUSD3-212ENST00000466141 CDK11AQ9UQ88 783 aaPredicted RBP11.48□□□□□ -0.57
RPUSD3-212ENST00000466141 ITSN2Q9NZM3 1697 aa11.48□□□□□ -0.57
RPUSD3-212ENST00000466141 KIDINS220Q9ULH0 1771 aa11.48□□□□□ -0.57
RPUSD3-212ENST00000466141 FMN1Q68DA7 1419 aa11.47□□□□□ -0.57
RPUSD3-212ENST00000466141 CNTLNQ9NXG0 1405 aa11.47□□□□□ -0.57
RPUSD3-212ENST00000466141 UBTFP17480 764 aaKnown RBP11.47□□□□□ -0.57
RPUSD3-212ENST00000466141 TIMELESSQ9UNS1 1208 aa11.47□□□□□ -0.57
RPUSD3-212ENST00000466141 PREX2Q70Z35 1606 aa11.46□□□□□ -0.57
RPUSD3-212ENST00000466141 MED1Q15648 1581 aaPredicted RBP11.46□□□□□ -0.57
RPUSD3-212ENST00000466141 CLIP1P30622 1438 aa11.46□□□□□ -0.57
RPUSD3-212ENST00000466141 NPATQ14207 1427 aa11.46□□□□□ -0.57
RPUSD3-212ENST00000466141 TAOK2Q9UL54 1235 aa11.46□□□□□ -0.57
RPUSD3-212ENST00000466141 ZMYM3Q14202 1370 aa11.45□□□□□ -0.58
RPUSD3-212ENST00000466141 SCAF1Q9H7N4 1312 aaKnown RBP11.45□□□□□ -0.58
RPUSD3-212ENST00000466141 MROH2AA6NES4 1674 aa11.45□□□□□ -0.58
RPUSD3-212ENST00000466141 MYO3AQ8NEV4 1616 aa11.45□□□□□ -0.58
RPUSD3-212ENST00000466141 HSPA1LP34931 641 aa11.44□□□□□ -0.58
RPUSD3-212ENST00000466141 CLTCQ00610 1675 aaKnown RBP11.43□□□□□ -0.58
RPUSD3-212ENST00000466141 CEP170BQ9Y4F5 1589 aaPredicted RBP11.43□□□□□ -0.58
RPUSD3-212ENST00000466141 PIP4K2BP78356 416 aa11.43□□□□□ -0.58
RPUSD3-212ENST00000466141 BCANQ96GW7 911 aa11.43□□□□□ -0.58
RPUSD3-212ENST00000466141 TCOF1Q13428 1488 aaKnown RBP11.43□□□□□ -0.58
RPUSD3-212ENST00000466141 SUPT6HQ7KZ85 1726 aaKnown RBP11.43□□□□□ -0.58
RPUSD3-212ENST00000466141 ZNF142P52746 1687 aaPredicted RBP11.43□□□□□ -0.58
RPUSD3-212ENST00000466141 SAMD9LQ8IVG5 1584 aa11.42□□□□□ -0.58
RPUSD3-212ENST00000466141 EIF5BO60841 1220 aaKnown RBP11.42□□□□□ -0.58
RPUSD3-212ENST00000466141 PLA2R1Q13018 1463 aa11.42□□□□□ -0.58
RPUSD3-212ENST00000466141 PKD2Q13563 968 aa11.41□□□□□ -0.58
RPUSD3-212ENST00000466141 PTPRKQ15262 1439 aa11.41□□□□□ -0.58
RPUSD3-212ENST00000466141 CDC42BPAQ5VT25 1732 aa11.4□□□□□ -0.58
RPUSD3-212ENST00000466141 SYCP2Q9BX26 1530 aa11.4□□□□□ -0.58
RPUSD3-212ENST00000466141 ZNF777Q9ULD5 760 aaPredicted RBP11.4□□□□□ -0.58
RPUSD3-212ENST00000466141 PPP6R1Q9UPN7 881 aa11.4□□□□□ -0.58
RPUSD3-212ENST00000466141 CEP162Q5TB80 1403 aa11.39□□□□□ -0.59
RPUSD3-212ENST00000466141 HOMEZQ8IX15 550 aa11.39□□□□□ -0.59
RPUSD3-212ENST00000466141 FYCO1Q9BQS8 1478 aa11.38□□□□□ -0.59
RPUSD3-212ENST00000466141 SPAG9O60271 1321 aaKnown RBP11.37□□□□□ -0.59
RPUSD3-212ENST00000466141 PLXNC1O60486 1568 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 179.8 ms