RNA–Protein interactions for RNA: ENST00000465871.1

SSB-207, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 421 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-207ENST00000465871 DOK7Q18PE1 504 aa16.12■□□□□ 0.17
SSB-207ENST00000465871 KIF3CO14782 793 aa16.1■□□□□ 0.17
SSB-207ENST00000465871 C2orf72A6NCS6 295 aa16.08■□□□□ 0.16
SSB-207ENST00000465871 ZNF710Q8N1W2 664 aa16.07■□□□□ 0.16
SSB-207ENST00000465871 RIMBP2O15034 1052 aa16.05■□□□□ 0.16
SSB-207ENST00000465871 GTPBP6O43824 516 aaPredicted RBP16.05■□□□□ 0.16
SSB-207ENST00000465871 TMC2Q8TDI7 906 aa16.05■□□□□ 0.16
SSB-207ENST00000465871 MARVELD3Q96A59 401 aa16.04■□□□□ 0.16
SSB-207ENST00000465871 PCDH10Q9P2E7 1040 aa16.02■□□□□ 0.16
SSB-207ENST00000465871 EMP3P54852 163 aa16.01■□□□□ 0.15
SSB-207ENST00000465871 HOXB1P14653 301 aaPredicted RBP15.99■□□□□ 0.15
SSB-207ENST00000465871 ZSWIM6Q9HCJ5 1215 aa15.99■□□□□ 0.15
SSB-207ENST00000465871 BBXQ8WY36 941 aaPredicted RBP15.96■□□□□ 0.15
SSB-207ENST00000465871 GPHNQ9NQX3 736 aaPredicted RBP15.93■□□□□ 0.14
SSB-207ENST00000465871 CDAN1Q8IWY9 1227 aa15.92■□□□□ 0.14
SSB-207ENST00000465871 FOXK1P85037 733 aa15.9■□□□□ 0.14
SSB-207ENST00000465871 GPR153Q6NV75 609 aa15.9■□□□□ 0.14
SSB-207ENST00000465871 FAM205CA6NFA0 338 aa15.87■□□□□ 0.13
SSB-207ENST00000465871 SLC34A2O95436 690 aa15.87■□□□□ 0.13
SSB-207ENST00000465871 HS3ST6Q96QI5 342 aa15.86■□□□□ 0.13
SSB-207ENST00000465871 CRISPLD2Q9H0B8 497 aa15.86■□□□□ 0.13
SSB-207ENST00000465871 ARSIQ5FYB1 569 aa15.85■□□□□ 0.13
SSB-207ENST00000465871 DSG2Q14126 1118 aa15.84■□□□□ 0.13
SSB-207ENST00000465871 PLPP6Q8IY26 295 aa15.83■□□□□ 0.12
SSB-207ENST00000465871 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.82■□□□□ 0.12
SSB-207ENST00000465871 POTEB3A0JP26 581 aa15.81■□□□□ 0.12
SSB-207ENST00000465871 ERBB3P21860 1342 aa15.81■□□□□ 0.12
SSB-207ENST00000465871 POTEBQ6S5H4 581 aa15.81■□□□□ 0.12
SSB-207ENST00000465871 NCKAP5LQ9HCH0 1330 aa15.81■□□□□ 0.12
SSB-207ENST00000465871 PCDHGA4Q9Y5G9 962 aa15.79■□□□□ 0.12
SSB-207ENST00000465871 PDE4AP27815 886 aa15.78■□□□□ 0.12
SSB-207ENST00000465871 KHSRPQ92945 711 aaKnown RBP eCLIP15.78■□□□□ 0.12
SSB-207ENST00000465871 VARS2Q5ST30 1063 aaKnown RBP15.75■□□□□ 0.11
SSB-207ENST00000465871 PPP1R15BQ5SWA1 713 aa15.75■□□□□ 0.11
SSB-207ENST00000465871 SPRYD3Q8NCJ5 442 aa15.75■□□□□ 0.11
SSB-207ENST00000465871 PTCD2Q8WV60 388 aaKnown RBP15.74■□□□□ 0.11
SSB-207ENST00000465871 PLSCR2Q9NRY7 297 aa15.74■□□□□ 0.11
SSB-207ENST00000465871 NUDT7P0C024 238 aa15.73■□□□□ 0.11
SSB-207ENST00000465871 CADPS2Q86UW7 1296 aa15.72■□□□□ 0.11
SSB-207ENST00000465871 ZNF316A6NFI3 1004 aaPredicted RBP15.7■□□□□ 0.1
SSB-207ENST00000465871 DDX27Q96GQ7 796 aaKnown RBP15.7■□□□□ 0.1
SSB-207ENST00000465871 LARP6Q9BRS8 491 aaKnown RBP15.7■□□□□ 0.1
SSB-207ENST00000465871 MFSD10Q14728 455 aa15.68■□□□□ 0.1
SSB-207ENST00000465871 PAXIP1Q6ZW49 1069 aaPredicted RBP15.67■□□□□ 0.1
SSB-207ENST00000465871 KRTAP3-3Q9BYR6 98 aa15.66■□□□□ 0.1
SSB-207ENST00000465871 KRTAP3-2Q9BYR7 98 aa15.66■□□□□ 0.1
SSB-207ENST00000465871 CFAP44Q96MT7 982 aa15.65■□□□□ 0.1
SSB-207ENST00000465871 TBC1D12O60347 775 aa15.64■□□□□ 0.09
SSB-207ENST00000465871 OXER1Q8TDS5 423 aa15.63■□□□□ 0.09
SSB-207ENST00000465871 LHX6Q9UPM6 363 aa15.63■□□□□ 0.09
SSB-207ENST00000465871 KDM4FA0A1W2PPD8 638 aa15.62■□□□□ 0.09
SSB-207ENST00000465871 ZNF687Q8N1G0 1237 aa15.62■□□□□ 0.09
SSB-207ENST00000465871 UPF1Q92900 1129 aaKnown RBP eCLIP15.61■□□□□ 0.09
SSB-207ENST00000465871 PSDA5PKW4 1024 aaPredicted RBP15.54■□□□□ 0.08
SSB-207ENST00000465871 SPNS2Q8IVW8 549 aa15.52■□□□□ 0.08
SSB-207ENST00000465871 EMILIN3Q9NT22 766 aa15.5■□□□□ 0.07
SSB-207ENST00000465871 CAMK2BQ13554 666 aa15.47■□□□□ 0.07
SSB-207ENST00000465871 PBX2P40425 430 aa15.46■□□□□ 0.07
SSB-207ENST00000465871 MAP3K9P80192 1104 aa15.44■□□□□ 0.06
SSB-207ENST00000465871 PPP4R3BQ5MIZ7 849 aa15.44■□□□□ 0.06
SSB-207ENST00000465871 EVI5O60447 810 aa15.43■□□□□ 0.06
SSB-207ENST00000465871 MMRN1Q13201 1228 aa15.41■□□□□ 0.06
SSB-207ENST00000465871 POTEEQ6S8J3 1075 aa15.41■□□□□ 0.06
SSB-207ENST00000465871 ANO8Q9HCE9 1232 aaPredicted RBP15.41■□□□□ 0.06
SSB-207ENST00000465871 LSM11P83369 360 aaKnown RBP eCLIP15.39■□□□□ 0.05
SSB-207ENST00000465871 AXIN2Q9Y2T1 843 aa15.38■□□□□ 0.05
SSB-207ENST00000465871 ZNF454Q8N9F8 522 aa15.37■□□□□ 0.05
SSB-207ENST00000465871 ARHGAP33O14559 1287 aa15.35■□□□□ 0.05
SSB-207ENST00000465871 FOSBP53539 338 aa15.35■□□□□ 0.05
SSB-207ENST00000465871 ANKRD13DQ6ZTN6 518 aa15.34■□□□□ 0.05
SSB-207ENST00000465871 JPH4Q96JJ6 628 aa15.34■□□□□ 0.05
SSB-207ENST00000465871 WDR70Q9NW82 654 aa15.34■□□□□ 0.05
SSB-207ENST00000465871 DPYSL4O14531 572 aa15.33■□□□□ 0.04
SSB-207ENST00000465871 TSHZ2Q9NRE2 1034 aa15.31■□□□□ 0.04
SSB-207ENST00000465871 E2F4Q16254 413 aa15.3■□□□□ 0.04
SSB-207ENST00000465871 PTGER2P43116 358 aa15.29■□□□□ 0.04
SSB-207ENST00000465871 PSEN2P49810 448 aa15.28■□□□□ 0.04
SSB-207ENST00000465871 BCL2L12Q9HB09 334 aa15.28■□□□□ 0.04
SSB-207ENST00000465871 KCNH8Q96L42 1107 aa15.27■□□□□ 0.04
SSB-207ENST00000465871 KCNK17Q96T54 332 aa15.26■□□□□ 0.03
SSB-207ENST00000465871 ZDHHC16Q969W1 377 aa15.25■□□□□ 0.03
SSB-207ENST00000465871 DMRTA1Q5VZB9 504 aa15.24■□□□□ 0.03
SSB-207ENST00000465871 PLCB2Q00722 1185 aa15.23■□□□□ 0.03
SSB-207ENST00000465871 PDIA6Q15084 440 aa15.23■□□□□ 0.03
SSB-207ENST00000465871 MYT1LQ9UL68 1186 aa15.23■□□□□ 0.03
SSB-207ENST00000465871 PCDHGA10Q9Y5H3 936 aa15.23■□□□□ 0.03
SSB-207ENST00000465871 ADGRD1Q6QNK2 874 aa15.22■□□□□ 0.03
SSB-207ENST00000465871 ARIH1Q9Y4X5 557 aaPredicted RBP15.22■□□□□ 0.03
SSB-207ENST00000465871 TK2O00142 265 aa15.21■□□□□ 0.03
SSB-207ENST00000465871 PHF14O94880 888 aa15.21■□□□□ 0.03
SSB-207ENST00000465871 PTPREP23469 700 aa15.2■□□□□ 0.02
SSB-207ENST00000465871 RNF166Q96A37 237 aaPredicted RBP15.2■□□□□ 0.02
SSB-207ENST00000465871 ADAM33Q9BZ11 813 aa15.2■□□□□ 0.02
SSB-207ENST00000465871 SPDYE16A6NNV3 312 aaPredicted RBP15.18■□□□□ 0.02
SSB-207ENST00000465871 FBXW7Q969H0 707 aa15.18■□□□□ 0.02
SSB-207ENST00000465871 TYW1BQ6NUM6 668 aa15.17■□□□□ 0.02
SSB-207ENST00000465871 EPAS1Q99814 870 aa15.15■□□□□ 0.02
SSB-207ENST00000465871 DDX12PQ92771 950 aa15.13■□□□□ 0.01
SSB-207ENST00000465871 HRO43593 1189 aa15.12■□□□□ 0.01
SSB-207ENST00000465871 SLC4A5Q9BY07 1137 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms