RNA–Protein interactions for RNA: ENST00000464628.1

SCAF8-205, Transcript of SR-related CTD associated factor 8, humanhuman

TSL 5

Gene SCAF8, Length 468 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8-205ENST00000464628 UHRF1BP1Q6BDS2 1440 aa20.15■□□□□ 0.82
SCAF8-205ENST00000464628 SAMD9Q5K651 1589 aa20.14■□□□□ 0.81
SCAF8-205ENST00000464628 SETD1BQ9UPS6 1966 aaKnown RBP20.13■□□□□ 0.81
SCAF8-205ENST00000464628 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.12■□□□□ 0.813e-9■■□□□ 12.2
SCAF8-205ENST00000464628 C3P01024 1663 aa20.12■□□□□ 0.81
SCAF8-205ENST00000464628 MED1Q15648 1581 aaPredicted RBP20.11■□□□□ 0.81
SCAF8-205ENST00000464628 NUP153P49790 1475 aaKnown RBP20.11■□□□□ 0.81
SCAF8-205ENST00000464628 CEBPAP49715 358 aaPredicted RBP20.1■□□□□ 0.81
SCAF8-205ENST00000464628 C9orf84Q5VXU9 1444 aa20.08■□□□□ 0.8
SCAF8-205ENST00000464628 ATP10AO60312 1499 aa20.06■□□□□ 0.8
SCAF8-205ENST00000464628 PRXQ9BXM0 1461 aa20.04■□□□□ 0.8
SCAF8-205ENST00000464628 NCOA1Q15788 1441 aa20.03■□□□□ 0.8
SCAF8-205ENST00000464628 P3H3Q8IVL6 736 aa20.01■□□□□ 0.79
SCAF8-205ENST00000464628 REREQ9P2R6 1566 aa19.97■□□□□ 0.79
SCAF8-205ENST00000464628 SCAPERQ9BY12 1400 aa19.97■□□□□ 0.79
SCAF8-205ENST00000464628 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.97■□□□□ 0.79
SCAF8-205ENST00000464628 HNRNPUL2Q1KMD3 747 aaKnown RBP19.97■□□□□ 0.79
SCAF8-205ENST00000464628 DIP2CQ9Y2E4 1556 aa19.95■□□□□ 0.78
SCAF8-205ENST00000464628 CAMSAP1Q5T5Y3 1602 aa19.95■□□□□ 0.78
SCAF8-205ENST00000464628 KDM5CP41229 1560 aa19.94■□□□□ 0.78
SCAF8-205ENST00000464628 UBAP1LF5GYI3 381 aa19.93■□□□□ 0.78
SCAF8-205ENST00000464628 FAM9AQ8IZU1 332 aaPredicted RBP19.93■□□□□ 0.78
SCAF8-205ENST00000464628 MYO5CQ9NQX4 1742 aa19.92■□□□□ 0.78
SCAF8-205ENST00000464628 ABCA6Q8N139 1617 aa19.91■□□□□ 0.78
SCAF8-205ENST00000464628 PLCH2O75038 1416 aa19.9■□□□□ 0.78
SCAF8-205ENST00000464628 ZNF335Q9H4Z2 1342 aaPredicted RBP19.89■□□□□ 0.77
SCAF8-205ENST00000464628 TRAPPC8Q9Y2L5 1435 aa19.89■□□□□ 0.77
SCAF8-205ENST00000464628 ZNF142P52746 1687 aaPredicted RBP19.88■□□□□ 0.77
SCAF8-205ENST00000464628 PLEKHD1A6NEE1 506 aa19.87■□□□□ 0.77
SCAF8-205ENST00000464628 AGLP35573 1532 aa19.86■□□□□ 0.77
SCAF8-205ENST00000464628 MROH2AA6NES4 1674 aa19.86■□□□□ 0.77
SCAF8-205ENST00000464628 ZNF518AQ6AHZ1 1483 aa19.86■□□□□ 0.77
SCAF8-205ENST00000464628 SUPT6HQ7KZ85 1726 aaKnown RBP19.85■□□□□ 0.77
SCAF8-205ENST00000464628 CDK13Q14004 1512 aaKnown RBP19.82■□□□□ 0.76
SCAF8-205ENST00000464628 HSPA1LP34931 641 aa19.82■□□□□ 0.76
SCAF8-205ENST00000464628 MYO3AQ8NEV4 1616 aa19.82■□□□□ 0.76
SCAF8-205ENST00000464628 SENP3Q9H4L4 574 aaPredicted RBP19.81■□□□□ 0.76
SCAF8-205ENST00000464628 PLA2R1Q13018 1463 aa19.79■□□□□ 0.76
SCAF8-205ENST00000464628 TCOF1Q13428 1488 aaKnown RBP19.79■□□□□ 0.76
SCAF8-205ENST00000464628 NPATQ14207 1427 aa19.77■□□□□ 0.76
SCAF8-205ENST00000464628 KIF14Q15058 1648 aa19.77■□□□□ 0.76
SCAF8-205ENST00000464628 NCKAP5LQ9HCH0 1330 aa19.76■□□□□ 0.75
SCAF8-205ENST00000464628 ALKQ9UM73 1620 aa19.76■□□□□ 0.75
SCAF8-205ENST00000464628 CNTLNQ9NXG0 1405 aa19.76■□□□□ 0.75
SCAF8-205ENST00000464628 MLH3Q9UHC1 1453 aa19.75■□□□□ 0.75
SCAF8-205ENST00000464628 CEP170BQ9Y4F5 1589 aaPredicted RBP19.74■□□□□ 0.75
SCAF8-205ENST00000464628 KIDINS220Q9ULH0 1771 aa19.73■□□□□ 0.75
SCAF8-205ENST00000464628 ITSN2Q9NZM3 1697 aa19.71■□□□□ 0.75
SCAF8-205ENST00000464628 CDC42BPBQ9Y5S2 1711 aa19.71■□□□□ 0.75
SCAF8-205ENST00000464628 AFAP1Q8N556 730 aa19.71■□□□□ 0.75
SCAF8-205ENST00000464628 POLR1AO95602 1720 aaPredicted RBP19.71■□□□□ 0.75
SCAF8-205ENST00000464628 EFCAB2Q5VUJ9 269 aa19.7■□□□□ 0.74
SCAF8-205ENST00000464628 PHF23Q9BUL5 403 aaPredicted RBP19.7■□□□□ 0.74
SCAF8-205ENST00000464628 ARHGAP5Q13017 1502 aa19.7■□□□□ 0.74
SCAF8-205ENST00000464628 CPS1P31327 1500 aa19.69■□□□□ 0.74
SCAF8-205ENST00000464628 CLTCQ00610 1675 aaKnown RBP19.68■□□□□ 0.74
SCAF8-205ENST00000464628 ABCC1P33527 1531 aa19.67■□□□□ 0.74
SCAF8-205ENST00000464628 PIP4K2BP78356 416 aa19.67■□□□□ 0.74
SCAF8-205ENST00000464628 PKD2Q13563 968 aa19.67■□□□□ 0.74
SCAF8-205ENST00000464628 SCAF1Q9H7N4 1312 aaKnown RBP19.67■□□□□ 0.74
SCAF8-205ENST00000464628 NEURL4Q96JN8 1562 aa19.66■□□□□ 0.74
SCAF8-205ENST00000464628 ESF1Q9H501 851 aaKnown RBP19.65■□□□□ 0.74
SCAF8-205ENST00000464628 PREX2Q70Z35 1606 aa19.63■□□□□ 0.73
SCAF8-205ENST00000464628 PPP6R1Q9UPN7 881 aa19.62■□□□□ 0.73
SCAF8-205ENST00000464628 DNMT1P26358 1616 aaKnown RBP19.62■□□□□ 0.73
SCAF8-205ENST00000464628 ZMYM3Q14202 1370 aa19.61■□□□□ 0.73
SCAF8-205ENST00000464628 TOM1O60784 492 aa19.61■□□□□ 0.73
SCAF8-205ENST00000464628 LRRIQ1Q96JM4 1722 aa19.6■□□□□ 0.73
SCAF8-205ENST00000464628 SHANK2Q9UPX8 1470 aa19.6■□□□□ 0.73
SCAF8-205ENST00000464628 PTPRKQ15262 1439 aa19.59■□□□□ 0.73
SCAF8-205ENST00000464628 VWDEQ8N2E2 1590 aa19.59■□□□□ 0.73
SCAF8-205ENST00000464628 RGS17Q9UGC6 210 aaPredicted RBP19.58■□□□□ 0.72
SCAF8-205ENST00000464628 MYT1LQ9UL68 1186 aa19.58■□□□□ 0.72
SCAF8-205ENST00000464628 RANGAP1P46060 587 aaPredicted RBP19.56■□□□□ 0.72
SCAF8-205ENST00000464628 PLXNC1O60486 1568 aa19.56■□□□□ 0.72
SCAF8-205ENST00000464628 SETD1AO15047 1707 aaKnown RBP19.54■□□□□ 0.72
SCAF8-205ENST00000464628 TROQ12816 1431 aaPredicted RBP19.54■□□□□ 0.72
SCAF8-205ENST00000464628 A2ML1A8K2U0 1454 aa19.54■□□□□ 0.72
SCAF8-205ENST00000464628 SAMD9LQ8IVG5 1584 aa19.53■□□□□ 0.72
SCAF8-205ENST00000464628 STRCP1A6NGW2 1772 aa19.53■□□□□ 0.72
SCAF8-205ENST00000464628 RNF17Q9BXT8 1623 aaKnown RBP19.53■□□□□ 0.72
SCAF8-205ENST00000464628 CDC42BPAQ5VT25 1732 aa19.51■□□□□ 0.71
SCAF8-205ENST00000464628 SYNMO15061 1565 aa19.48■□□□□ 0.71
SCAF8-205ENST00000464628 INO80Q9ULG1 1556 aaPredicted RBP19.47■□□□□ 0.71
SCAF8-205ENST00000464628 CSRNP3Q8WYN3 585 aa19.46■□□□□ 0.71
SCAF8-205ENST00000464628 CLIP1P30622 1438 aa19.45■□□□□ 0.7
SCAF8-205ENST00000464628 DEPDC5O75140 1603 aa19.43■□□□□ 0.7
SCAF8-205ENST00000464628 ATP7AQ04656 1500 aa19.43■□□□□ 0.7
SCAF8-205ENST00000464628 IQGAP1P46940 1657 aa19.42■□□□□ 0.7
SCAF8-205ENST00000464628 LRRC7Q96NW7 1537 aa19.41■□□□□ 0.7
SCAF8-205ENST00000464628 SYCP2Q9BX26 1530 aa19.41■□□□□ 0.7
SCAF8-205ENST00000464628 FMN1Q68DA7 1419 aa19.41■□□□□ 0.7
SCAF8-205ENST00000464628 MED14O60244 1454 aa19.41■□□□□ 0.7
SCAF8-205ENST00000464628 CDK11AQ9UQ88 783 aaPredicted RBP19.4■□□□□ 0.7
SCAF8-205ENST00000464628 POTEAQ6S8J7 498 aa19.39■□□□□ 0.69
SCAF8-205ENST00000464628 XIRP1Q702N8 1843 aaKnown RBP19.39■□□□□ 0.69
SCAF8-205ENST00000464628 A2MP01023 1474 aa19.38■□□□□ 0.69
SCAF8-205ENST00000464628 ADGBQ8N7X0 1667 aa19.38■□□□□ 0.69
SCAF8-205ENST00000464628 ZC3H13Q5T200 1668 aaKnown RBP19.35■□□□□ 0.69
SCAF8-205ENST00000464628 NPHP4O75161 1426 aaPredicted RBP19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms