RNA–Protein interactions for RNA: ENST00000464520.1

ABCA2-211, Transcript of ATP binding cassette subfamily A member 2, humanhuman

TSL 2

Gene ABCA2, Length 886 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA2-211ENST00000464520 MAGI2Q86UL8 1455 aa39.24■■■■□ 3.87
ABCA2-211ENST00000464520 POGZQ7Z3K3 1410 aa39.22■■■■□ 3.87
ABCA2-211ENST00000464520 MTUS2Q5JR59 1369 aa39.21■■■■□ 3.87
ABCA2-211ENST00000464520 ZMYM4Q5VZL5 1548 aa39.2■■■■□ 3.87
ABCA2-211ENST00000464520 ARHGEF40Q8TER5 1519 aa39.12■■■■□ 3.85
ABCA2-211ENST00000464520 ZNF518AQ6AHZ1 1483 aa39.11■■■■□ 3.85
ABCA2-211ENST00000464520 PREX2Q70Z35 1606 aa39.11■■■■□ 3.85
ABCA2-211ENST00000464520 CDC42BPBQ9Y5S2 1711 aa39.11■■■■□ 3.85
ABCA2-211ENST00000464520 ARID4BQ4LE39 1312 aaPredicted RBP39.11■■■■□ 3.85
ABCA2-211ENST00000464520 VPS8Q8N3P4 1428 aa39.1■■■■□ 3.85
ABCA2-211ENST00000464520 AFAP1Q8N556 730 aa39.09■■■■□ 3.85
ABCA2-211ENST00000464520 ZFYVE16Q7Z3T8 1539 aa39.09■■■■□ 3.85
ABCA2-211ENST00000464520 GPATCH8Q9UKJ3 1502 aaKnown RBP39.09■■■■□ 3.85
ABCA2-211ENST00000464520 CCNB3Q8WWL7 1395 aa39.07■■■■□ 3.84
ABCA2-211ENST00000464520 YEATS2Q9ULM3 1422 aa39.06■■■■□ 3.84
ABCA2-211ENST00000464520 CFDP1Q9UEE9 299 aaPredicted RBP39.04■■■■□ 3.84
ABCA2-211ENST00000464520 EHBP1L1Q8N3D4 1523 aa39.02■■■■□ 3.84
ABCA2-211ENST00000464520 CDC42BPAQ5VT25 1732 aa39.01■■■■□ 3.84
ABCA2-211ENST00000464520 ZNF777Q9ULD5 760 aaPredicted RBP39■■■■□ 3.83
ABCA2-211ENST00000464520 ABCC1P33527 1531 aa38.98■■■■□ 3.83
ABCA2-211ENST00000464520 ATP10AO60312 1499 aa38.98■■■■□ 3.83
ABCA2-211ENST00000464520 KDM5CP41229 1560 aa38.97■■■■□ 3.83
ABCA2-211ENST00000464520 ARHGEF12Q9NZN5 1544 aa38.95■■■■□ 3.83
ABCA2-211ENST00000464520 MYT1LQ9UL68 1186 aa38.95■■■■□ 3.83
ABCA2-211ENST00000464520 TRAPPC8Q9Y2L5 1435 aa38.94■■■■□ 3.82
ABCA2-211ENST00000464520 MLH3Q9UHC1 1453 aa38.93■■■■□ 3.82
ABCA2-211ENST00000464520 KIAA1107Q9UPP5 1409 aa38.92■■■■□ 3.82
ABCA2-211ENST00000464520 ADAMTSL3P82987 1691 aa38.92■■■■□ 3.82
ABCA2-211ENST00000464520 PLEKHH2Q8IVE3 1493 aa38.92■■■■□ 3.82
ABCA2-211ENST00000464520 C9orf84Q5VXU9 1444 aa38.9■■■■□ 3.82
ABCA2-211ENST00000464520 BCORL1Q5H9F3 1711 aa38.9■■■■□ 3.82
ABCA2-211ENST00000464520 TIAM1Q13009 1591 aa38.89■■■■□ 3.82
ABCA2-211ENST00000464520 MAP3K1Q13233 1512 aa38.87■■■■□ 3.81
ABCA2-211ENST00000464520 HNRNPMP52272 730 aaKnown RBP eCLIP38.86■■■■□ 3.81
ABCA2-211ENST00000464520 SAMD9LQ8IVG5 1584 aa38.85■■■■□ 3.81
ABCA2-211ENST00000464520 ITSN2Q9NZM3 1697 aa38.84■■■■□ 3.81
ABCA2-211ENST00000464520 HECW2Q9P2P5 1572 aa38.84■■■■□ 3.81
ABCA2-211ENST00000464520 PTPRMP28827 1452 aa38.82■■■■□ 3.81
ABCA2-211ENST00000464520 NCOA2Q15596 1464 aa38.81■■■■□ 3.8
ABCA2-211ENST00000464520 LRRC9Q6ZRR7 1453 aa38.8■■■■□ 3.8
ABCA2-211ENST00000464520 SPAG9O60271 1321 aaKnown RBP38.78■■■■□ 3.8
ABCA2-211ENST00000464520 SYCP2Q9BX26 1530 aa38.78■■■■□ 3.8
ABCA2-211ENST00000464520 SUPT6HQ7KZ85 1726 aaKnown RBP38.77■■■■□ 3.8
ABCA2-211ENST00000464520 APLP2Q06481 763 aa38.77■■■■□ 3.8
ABCA2-211ENST00000464520 MLECQ14165 292 aa38.76■■■■□ 3.8
ABCA2-211ENST00000464520 DIP2CQ9Y2E4 1556 aa38.74■■■■□ 3.79
ABCA2-211ENST00000464520 ZNF644Q9H582 1327 aaPredicted RBP38.73■■■■□ 3.79
ABCA2-211ENST00000464520 MADDQ8WXG6 1647 aa38.73■■■■□ 3.79
ABCA2-211ENST00000464520 REREQ9P2R6 1566 aa38.73■■■■□ 3.79
ABCA2-211ENST00000464520 KANK4Q5T7N3 995 aaPredicted RBP38.72■■■■□ 3.79
ABCA2-211ENST00000464520 SIGLEC1Q9BZZ2 1709 aa38.71■■■■□ 3.79
ABCA2-211ENST00000464520 RSPH4AQ5TD94 716 aa38.7■■■■□ 3.79
ABCA2-211ENST00000464520 KIDINS220Q9ULH0 1771 aa38.66■■■■□ 3.78
ABCA2-211ENST00000464520 ABCA6Q8N139 1617 aa38.66■■■■□ 3.78
ABCA2-211ENST00000464520 MBD5Q9P267 1494 aa38.66■■■■□ 3.78
ABCA2-211ENST00000464520 AGLP35573 1532 aa38.64■■■■□ 3.78
ABCA2-211ENST00000464520 RIMS1Q86UR5 1692 aaKnown RBP38.58■■■■□ 3.77
ABCA2-211ENST00000464520 ATP7AQ04656 1500 aa38.58■■■■□ 3.77
ABCA2-211ENST00000464520 RTEL1-TNFRSF6BF6WH68 1400 aa38.55■■■■□ 3.76
ABCA2-211ENST00000464520 CAMSAP2Q08AD1 1489 aa38.54■■■■□ 3.76
ABCA2-211ENST00000464520 MIA2Q96PC5 1412 aa38.52■■■■□ 3.76
ABCA2-211ENST00000464520 INO80Q9ULG1 1556 aaPredicted RBP38.52■■■■□ 3.76
ABCA2-211ENST00000464520 ESF1Q9H501 851 aaKnown RBP38.51■■■■□ 3.76
ABCA2-211ENST00000464520 CCDC141Q6ZP82 1450 aa38.5■■■■□ 3.75
ABCA2-211ENST00000464520 FER1L4A9Z1Z3 1794 aa38.49■■■■□ 3.75
ABCA2-211ENST00000464520 MYOM3Q5VTT5 1437 aa38.49■■■■□ 3.75
ABCA2-211ENST00000464520 A2MP01023 1474 aa38.48■■■■□ 3.75
ABCA2-211ENST00000464520 TSPY4P0CV99 314 aa38.48■■■■□ 3.75
ABCA2-211ENST00000464520 TSPY10P0CW01 314 aa38.48■■■■□ 3.75
ABCA2-211ENST00000464520 PLPPR3Q6T4P5 718 aa38.45■■■■□ 3.75
ABCA2-211ENST00000464520 ARHGEF5Q12774 1597 aa38.41■■■■□ 3.74
ABCA2-211ENST00000464520 CNTLNQ9NXG0 1405 aa38.39■■■■□ 3.74
ABCA2-211ENST00000464520 PPP6R1Q9UPN7 881 aa38.38■■■■□ 3.73
ABCA2-211ENST00000464520 DHX29Q7Z478 1369 aaKnown RBP38.38■■■■□ 3.73
ABCA2-211ENST00000464520 PLXNC1O60486 1568 aa38.37■■■■□ 3.73
ABCA2-211ENST00000464520 CEBPAP49715 358 aaPredicted RBP38.37■■■■□ 3.73
ABCA2-211ENST00000464520 ADGBQ8N7X0 1667 aa38.34■■■■□ 3.73
ABCA2-211ENST00000464520 LMTK3Q96Q04 1460 aa38.33■■■■□ 3.73
ABCA2-211ENST00000464520 GGT6Q6P531 493 aa38.3■■■■□ 3.72
ABCA2-211ENST00000464520 SETD1BQ9UPS6 1966 aaKnown RBP38.22■■■■□ 3.71
ABCA2-211ENST00000464520 ZMYM3Q14202 1370 aa38.22■■■■□ 3.71
ABCA2-211ENST00000464520 KIF3BO15066 747 aa38.21■■■■□ 3.71
ABCA2-211ENST00000464520 FGD6Q6ZV73 1430 aa38.21■■■■□ 3.71
ABCA2-211ENST00000464520 MAST1Q9Y2H9 1570 aa38.2■■■■□ 3.71
ABCA2-211ENST00000464520 PTPN23Q9H3S7 1636 aa38.16■■■■□ 3.7
ABCA2-211ENST00000464520 C3P01024 1663 aa38.15■■■■□ 3.7
ABCA2-211ENST00000464520 HSPA2P54652 639 aa38.15■■■■□ 3.7
ABCA2-211ENST00000464520 TCOF1Q13428 1488 aaKnown RBP38.15■■■■□ 3.7
ABCA2-211ENST00000464520 UHRF1BP1Q6BDS2 1440 aa38.13■■■■□ 3.7
ABCA2-211ENST00000464520 MROH2AA6NES4 1674 aa38.13■■■■□ 3.69
ABCA2-211ENST00000464520 ABCC5O15440 1437 aa38.12■■■■□ 3.69
ABCA2-211ENST00000464520 NPATQ14207 1427 aa38.12■■■■□ 3.69
ABCA2-211ENST00000464520 PREX1Q8TCU6 1659 aa38.1■■■■□ 3.69
ABCA2-211ENST00000464520 SHANK2Q9UPX8 1470 aa38.08■■■■□ 3.69
ABCA2-211ENST00000464520 FAM135AQ9P2D6 1515 aa38.05■■■■□ 3.68
ABCA2-211ENST00000464520 DAPK1P53355 1430 aa38.04■■■■□ 3.68
ABCA2-211ENST00000464520 WASHC2CQ9Y4E1 1318 aa38.04■■■■□ 3.68
ABCA2-211ENST00000464520 CLTCQ00610 1675 aaKnown RBP38.03■■■■□ 3.68
ABCA2-211ENST00000464520 DUOX2Q9NRD8 1548 aa37.99■■■■□ 3.67
ABCA2-211ENST00000464520 PTPRKQ15262 1439 aa37.98■■■■□ 3.67
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms