RNA–Protein interactions for RNA: ENST00000464115.1

SNHG12-203, Transcript of small nucleolar RNA host gene 12, humanhuman

TSL 3

Gene SNHG12, Length 712 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG12-203ENST00000464115 POGZQ7Z3K3 1410 aa29.34■■■□□ 2.29
SNHG12-203ENST00000464115 ARHGEF40Q8TER5 1519 aa29.32■■■□□ 2.28
SNHG12-203ENST00000464115 ARHGAP5Q13017 1502 aa29.3■■■□□ 2.28
SNHG12-203ENST00000464115 MAGI2Q86UL8 1455 aa29.29■■■□□ 2.28
SNHG12-203ENST00000464115 CDC42BPBQ9Y5S2 1711 aa29.29■■■□□ 2.28
SNHG12-203ENST00000464115 YEATS2Q9ULM3 1422 aa29.28■■■□□ 2.28
SNHG12-203ENST00000464115 PREX2Q70Z35 1606 aa29.26■■■□□ 2.27
SNHG12-203ENST00000464115 ZFYVE16Q7Z3T8 1539 aa29.25■■■□□ 2.27
SNHG12-203ENST00000464115 ADAMTSL3P82987 1691 aa29.24■■■□□ 2.27
SNHG12-203ENST00000464115 CDC42BPAQ5VT25 1732 aa29.2■■■□□ 2.27
SNHG12-203ENST00000464115 AFAP1Q8N556 730 aa29.2■■■□□ 2.26
SNHG12-203ENST00000464115 ZNF518AQ6AHZ1 1483 aa29.2■■■□□ 2.26
SNHG12-203ENST00000464115 BCORL1Q5H9F3 1711 aa29.2■■■□□ 2.26
SNHG12-203ENST00000464115 ARHGEF12Q9NZN5 1544 aa29.19■■■□□ 2.26
SNHG12-203ENST00000464115 GPATCH8Q9UKJ3 1502 aaKnown RBP29.19■■■□□ 2.26
SNHG12-203ENST00000464115 KDM5CP41229 1560 aa29.18■■■□□ 2.26
SNHG12-203ENST00000464115 ARID4BQ4LE39 1312 aaPredicted RBP29.18■■■□□ 2.26
SNHG12-203ENST00000464115 SIGLEC1Q9BZZ2 1709 aa29.17■■■□□ 2.26
SNHG12-203ENST00000464115 ABCC1P33527 1531 aa29.16■■■□□ 2.26
SNHG12-203ENST00000464115 MTUS2Q5JR59 1369 aa29.15■■■□□ 2.26
SNHG12-203ENST00000464115 TRAPPC8Q9Y2L5 1435 aa29.13■■■□□ 2.25
SNHG12-203ENST00000464115 ATP10AO60312 1499 aa29.13■■■□□ 2.25
SNHG12-203ENST00000464115 PTPRMP28827 1452 aa29.11■■■□□ 2.25
SNHG12-203ENST00000464115 MLH3Q9UHC1 1453 aa29.09■■■□□ 2.25
SNHG12-203ENST00000464115 MADDQ8WXG6 1647 aa29.09■■■□□ 2.25
SNHG12-203ENST00000464115 VPS8Q8N3P4 1428 aa29.08■■■□□ 2.25
SNHG12-203ENST00000464115 EHBP1L1Q8N3D4 1523 aa29.08■■■□□ 2.25
SNHG12-203ENST00000464115 SAMD9LQ8IVG5 1584 aa29.08■■■□□ 2.25
SNHG12-203ENST00000464115 ITSN2Q9NZM3 1697 aa29.08■■■□□ 2.25
SNHG12-203ENST00000464115 C9orf84Q5VXU9 1444 aa29.07■■■□□ 2.24
SNHG12-203ENST00000464115 CCNB3Q8WWL7 1395 aa29.07■■■□□ 2.24
SNHG12-203ENST00000464115 HECW2Q9P2P5 1572 aa29.06■■■□□ 2.24
SNHG12-203ENST00000464115 CFDP1Q9UEE9 299 aaPredicted RBP29.04■■■□□ 2.24
SNHG12-203ENST00000464115 ZNF777Q9ULD5 760 aaPredicted RBP29.04■■■□□ 2.24
SNHG12-203ENST00000464115 DIP2CQ9Y2E4 1556 aa29.02■■■□□ 2.24
SNHG12-203ENST00000464115 KIAA1107Q9UPP5 1409 aa29.02■■■□□ 2.24
SNHG12-203ENST00000464115 TIAM1Q13009 1591 aa29.01■■■□□ 2.24
SNHG12-203ENST00000464115 SYCP2Q9BX26 1530 aa28.99■■■□□ 2.23
SNHG12-203ENST00000464115 REREQ9P2R6 1566 aa28.99■■■□□ 2.23
SNHG12-203ENST00000464115 ABCA6Q8N139 1617 aa28.98■■■□□ 2.23
SNHG12-203ENST00000464115 HNRNPMP52272 730 aaKnown RBP eCLIP28.98■■■□□ 2.23
SNHG12-203ENST00000464115 PLEKHH2Q8IVE3 1493 aa28.97■■■□□ 2.23
SNHG12-203ENST00000464115 KIDINS220Q9ULH0 1771 aa28.96■■■□□ 2.23
SNHG12-203ENST00000464115 RIMS1Q86UR5 1692 aaKnown RBP28.96■■■□□ 2.23
SNHG12-203ENST00000464115 MLECQ14165 292 aa28.95■■■□□ 2.22
SNHG12-203ENST00000464115 MYT1LQ9UL68 1186 aa28.94■■■□□ 2.22
SNHG12-203ENST00000464115 ZNF644Q9H582 1327 aaPredicted RBP28.94■■■□□ 2.22
SNHG12-203ENST00000464115 NCOA2Q15596 1464 aa28.93■■■□□ 2.22
SNHG12-203ENST00000464115 MAP3K1Q13233 1512 aa28.91■■■□□ 2.22
SNHG12-203ENST00000464115 LRRC9Q6ZRR7 1453 aa28.91■■■□□ 2.22
SNHG12-203ENST00000464115 SUPT6HQ7KZ85 1726 aaKnown RBP28.9■■■□□ 2.22
SNHG12-203ENST00000464115 AGLP35573 1532 aa28.89■■■□□ 2.22
SNHG12-203ENST00000464115 MBD5Q9P267 1494 aa28.89■■■□□ 2.22
SNHG12-203ENST00000464115 SPAG9O60271 1321 aaKnown RBP28.89■■■□□ 2.21
SNHG12-203ENST00000464115 FER1L4A9Z1Z3 1794 aa28.87■■■□□ 2.21
SNHG12-203ENST00000464115 KANK4Q5T7N3 995 aaPredicted RBP28.86■■■□□ 2.21
SNHG12-203ENST00000464115 INO80Q9ULG1 1556 aaPredicted RBP28.84■■■□□ 2.21
SNHG12-203ENST00000464115 ATP7AQ04656 1500 aa28.84■■■□□ 2.21
SNHG12-203ENST00000464115 LMTK3Q96Q04 1460 aa28.81■■■□□ 2.2
SNHG12-203ENST00000464115 CAMSAP2Q08AD1 1489 aa28.78■■■□□ 2.2
SNHG12-203ENST00000464115 PLXNC1O60486 1568 aa28.75■■■□□ 2.19
SNHG12-203ENST00000464115 PLPPR3Q6T4P5 718 aa28.75■■■□□ 2.19
SNHG12-203ENST00000464115 RTEL1-TNFRSF6BF6WH68 1400 aa28.75■■■□□ 2.19
SNHG12-203ENST00000464115 CEBPAP49715 358 aaPredicted RBP28.74■■■□□ 2.19
SNHG12-203ENST00000464115 A2MP01023 1474 aa28.73■■■□□ 2.19
SNHG12-203ENST00000464115 RSPH4AQ5TD94 716 aa28.71■■■□□ 2.19
SNHG12-203ENST00000464115 CCDC141Q6ZP82 1450 aa28.71■■■□□ 2.19
SNHG12-203ENST00000464115 MYOM3Q5VTT5 1437 aa28.67■■■□□ 2.18
SNHG12-203ENST00000464115 ARHGEF5Q12774 1597 aa28.67■■■□□ 2.18
SNHG12-203ENST00000464115 MIA2Q96PC5 1412 aa28.66■■■□□ 2.18
SNHG12-203ENST00000464115 ADGBQ8N7X0 1667 aa28.65■■■□□ 2.18
SNHG12-203ENST00000464115 CNTLNQ9NXG0 1405 aa28.63■■■□□ 2.17
SNHG12-203ENST00000464115 DHX29Q7Z478 1369 aaKnown RBP28.62■■■□□ 2.17
SNHG12-203ENST00000464115 C3P01024 1663 aa28.62■■■□□ 2.17
SNHG12-203ENST00000464115 HSPA2P54652 639 aa28.62■■■□□ 2.17
SNHG12-203ENST00000464115 APLP2Q06481 763 aa28.62■■■□□ 2.17
SNHG12-203ENST00000464115 ESF1Q9H501 851 aaKnown RBP28.6■■■□□ 2.17
SNHG12-203ENST00000464115 PREX1Q8TCU6 1659 aa28.58■■■□□ 2.16
SNHG12-203ENST00000464115 MROH2AA6NES4 1674 aa28.55■■■□□ 2.16
SNHG12-203ENST00000464115 ZMYM3Q14202 1370 aa28.55■■■□□ 2.16
SNHG12-203ENST00000464115 TSPY4P0CV99 314 aa28.55■■■□□ 2.16
SNHG12-203ENST00000464115 TSPY10P0CW01 314 aa28.55■■■□□ 2.16
SNHG12-203ENST00000464115 GGT6Q6P531 493 aa28.55■■■□□ 2.16
SNHG12-203ENST00000464115 PPP6R1Q9UPN7 881 aa28.55■■■□□ 2.16
SNHG12-203ENST00000464115 SETD1BQ9UPS6 1966 aaKnown RBP28.53■■■□□ 2.16
SNHG12-203ENST00000464115 MAST1Q9Y2H9 1570 aa28.53■■■□□ 2.16
SNHG12-203ENST00000464115 UHRF1BP1Q6BDS2 1440 aa28.5■■■□□ 2.15
SNHG12-203ENST00000464115 CLTCQ00610 1675 aaKnown RBP28.49■■■□□ 2.15
SNHG12-203ENST00000464115 NPATQ14207 1427 aa28.49■■■□□ 2.15
SNHG12-203ENST00000464115 KIF3BO15066 747 aa28.47■■■□□ 2.15
SNHG12-203ENST00000464115 FGD6Q6ZV73 1430 aa28.45■■■□□ 2.15
SNHG12-203ENST00000464115 PTPN23Q9H3S7 1636 aa28.45■■■□□ 2.14
SNHG12-203ENST00000464115 TCOF1Q13428 1488 aaKnown RBP28.44■■■□□ 2.14
SNHG12-203ENST00000464115 ABCC5O15440 1437 aa28.43■■■□□ 2.14
SNHG12-203ENST00000464115 PTPRKQ15262 1439 aa28.43■■■□□ 2.14
SNHG12-203ENST00000464115 SHANK2Q9UPX8 1470 aa28.39■■■□□ 2.13
SNHG12-203ENST00000464115 FAM135AQ9P2D6 1515 aa28.38■■■□□ 2.13
SNHG12-203ENST00000464115 STRCQ7RTU9 1775 aa28.37■■■□□ 2.13
SNHG12-203ENST00000464115 DAPK1P53355 1430 aa28.36■■■□□ 2.13
SNHG12-203ENST00000464115 ILDR1Q86SU0 546 aaPredicted RBP28.36■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms