RNA–Protein interactions for RNA: ENST00000463407.5

NUP58-206, Transcript of nucleoporin 58, humanhuman

TSL 1 (best) BASIC

Gene NUP58, Length 6,360 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-206ENST00000463407 OSCARQ8IYS5 282 aa16.64■□□□□ 0.25
NUP58-206ENST00000463407 WASHC2CQ9Y4E1 1318 aa16.64■□□□□ 0.25
NUP58-206ENST00000463407 FANCD2Q9BXW9 1451 aa16.63■□□□□ 0.25
NUP58-206ENST00000463407 NUTM2DQ5VT03 806 aaPredicted RBP16.62■□□□□ 0.25
NUP58-206ENST00000463407 CCDC9Q9Y3X0 531 aaKnown RBP16.62■□□□□ 0.25
NUP58-206ENST00000463407 CDK11BP21127 795 aaKnown RBP16.62■□□□□ 0.25
NUP58-206ENST00000463407 GOLGA2Q08379 1002 aa16.62■□□□□ 0.25
NUP58-206ENST00000463407 SUPT16HQ9Y5B9 1047 aaKnown RBP16.62■□□□□ 0.25
NUP58-206ENST00000463407 RTF1Q92541 710 aaKnown RBP16.61■□□□□ 0.25
NUP58-206ENST00000463407 FHOD3Q2V2M9 1422 aa16.61■□□□□ 0.25
NUP58-206ENST00000463407 BECN1Q14457 450 aa16.58■□□□□ 0.25
NUP58-206ENST00000463407 MPHOSPH9Q99550 1183 aa16.58■□□□□ 0.25
NUP58-206ENST00000463407 ROCK2O75116 1388 aaKnown RBP16.58■□□□□ 0.25
NUP58-206ENST00000463407 DDRGK1Q96HY6 314 aa16.57■□□□□ 0.24
NUP58-206ENST00000463407 NCLP19338 710 aaKnown RBP16.57■□□□□ 0.24
NUP58-206ENST00000463407 TIMELESSQ9UNS1 1208 aa16.57■□□□□ 0.24
NUP58-206ENST00000463407 HSPA5P11021 654 aaKnown RBP16.57■□□□□ 0.24
NUP58-206ENST00000463407 CHMP4BQ9H444 224 aaKnown RBP16.57■□□□□ 0.24
NUP58-206ENST00000463407 CCDC18Q5T9S5 1454 aa16.56■□□□□ 0.24
NUP58-206ENST00000463407 RSPH4AQ5TD94 716 aa16.55■□□□□ 0.24
NUP58-206ENST00000463407 TAOK2Q9UL54 1235 aa16.55■□□□□ 0.24
NUP58-206ENST00000463407 TULP1O00294 542 aaPredicted RBP16.54■□□□□ 0.24
NUP58-206ENST00000463407 MS4A1P11836 297 aa16.54■□□□□ 0.24
NUP58-206ENST00000463407 PTPRGP23470 1445 aa16.53■□□□□ 0.24
NUP58-206ENST00000463407 RAB3GAP2Q9H2M9 1393 aa16.53■□□□□ 0.24
NUP58-206ENST00000463407 ZNF330Q9Y3S2 320 aaPredicted RBP16.52■□□□□ 0.23
NUP58-206ENST00000463407 NGDNQ8NEJ9 315 aaKnown RBP16.51■□□□□ 0.23
NUP58-206ENST00000463407 EIF3AQ14152 1382 aaKnown RBP16.51■□□□□ 0.23
NUP58-206ENST00000463407 EIF5BO60841 1220 aaKnown RBP16.5■□□□□ 0.23
NUP58-206ENST00000463407 AEBP2Q6ZN18 517 aaPredicted RBP16.5■□□□□ 0.23
NUP58-206ENST00000463407 TPRNQ4KMQ1 711 aa16.49■□□□□ 0.23
NUP58-206ENST00000463407 KTN1Q86UP2 1357 aaKnown RBP16.48■□□□□ 0.23
NUP58-206ENST00000463407 NUTM2FA1L443 756 aa16.48■□□□□ 0.23
NUP58-206ENST00000463407 KCNJ4P48050 445 aa16.47■□□□□ 0.23
NUP58-206ENST00000463407 FGD1P98174 961 aa16.46■□□□□ 0.23
NUP58-206ENST00000463407 RGS3P49796 1198 aa16.46■□□□□ 0.23
NUP58-206ENST00000463407 U2AF1L5P0DN76 240 aaPredicted RBP16.46■□□□□ 0.22
NUP58-206ENST00000463407 U2AF1Q01081 240 aaKnown RBP eCLIP16.46■□□□□ 0.22
NUP58-206ENST00000463407 ZRSR1Q15695 479 aaKnown RBP16.46■□□□□ 0.22
NUP58-206ENST00000463407 NAP1L2Q9ULW6 460 aaPredicted RBP16.45■□□□□ 0.22
NUP58-206ENST00000463407 GOLGA6L22H0YM25 854 aa16.45■□□□□ 0.22
NUP58-206ENST00000463407 TERF2IPQ9NYB0 399 aa16.45■□□□□ 0.22
NUP58-206ENST00000463407 PPP4R2Q9NY27 417 aa16.44■□□□□ 0.22
NUP58-206ENST00000463407 FAM69CQ0P6D2 419 aa16.44■□□□□ 0.22
NUP58-206ENST00000463407 GAPVD1Q14C86 1478 aa16.41■□□□□ 0.22
NUP58-206ENST00000463407 TMX4Q9H1E5 349 aaPredicted RBP16.41■□□□□ 0.22
NUP58-206ENST00000463407 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.4■□□□□ 0.22
NUP58-206ENST00000463407 AMPHP49418 695 aa16.4■□□□□ 0.22
NUP58-206ENST00000463407 TRAK1Q9UPV9 953 aa16.4■□□□□ 0.22
NUP58-206ENST00000463407 CALD1Q05682 793 aaKnown RBP16.4■□□□□ 0.22
NUP58-206ENST00000463407 LTV1Q96GA3 475 aaPredicted RBP16.4■□□□□ 0.22
NUP58-206ENST00000463407 CCER2I3L3R5 266 aa16.39■□□□□ 0.21
NUP58-206ENST00000463407 ISY1Q9ULR0 285 aaKnown RBP16.38■□□□□ 0.21
NUP58-206ENST00000463407 RUSC2Q8N2Y8 1516 aa16.38■□□□□ 0.21
NUP58-206ENST00000463407 FGD5Q6ZNL6 1462 aa16.37■□□□□ 0.21
NUP58-206ENST00000463407 RAD54L2Q9Y4B4 1467 aa16.37■□□□□ 0.21
NUP58-206ENST00000463407 APBB1O00213 710 aa16.35■□□□□ 0.21
NUP58-206ENST00000463407 IPO8O15397 1037 aaKnown RBP16.35■□□□□ 0.21
NUP58-206ENST00000463407 RALBP1Q15311 655 aa16.35■□□□□ 0.21
NUP58-206ENST00000463407 L3MBTL2Q969R5 705 aa16.34■□□□□ 0.21
NUP58-206ENST00000463407 B4GALNT3Q6L9W6 998 aa16.34■□□□□ 0.21
NUP58-206ENST00000463407 ANP32EQ9BTT0 268 aa16.33■□□□□ 0.2
NUP58-206ENST00000463407 EVA1CP58658 441 aa16.33■□□□□ 0.2
NUP58-206ENST00000463407 CCDC144AA2RUR9 1427 aa16.32■□□□□ 0.2
NUP58-206ENST00000463407 AQRO60306 1485 aaKnown RBP eCLIP16.32■□□□□ 0.23e-7■■■□□ 19.2
NUP58-206ENST00000463407 VGFO15240 615 aaPredicted RBP16.32■□□□□ 0.2
NUP58-206ENST00000463407 HSP90AB1P08238 724 aaKnown RBP16.32■□□□□ 0.2
NUP58-206ENST00000463407 CHMP3Q9Y3E7 222 aa16.32■□□□□ 0.2
NUP58-206ENST00000463407 STK31Q9BXU1 1019 aa16.31■□□□□ 0.2
NUP58-206ENST00000463407 UACAQ9BZF9 1416 aa16.31■□□□□ 0.2
NUP58-206ENST00000463407 MEX3CQ5U5Q3 659 aaKnown RBP16.29■□□□□ 0.2
NUP58-206ENST00000463407 PRDM2Q13029 1718 aa16.29■□□□□ 0.2
NUP58-206ENST00000463407 CHMP4AQ9BY43 222 aa16.29■□□□□ 0.2
NUP58-206ENST00000463407 TAF7LQ5H9L4 462 aa16.29■□□□□ 0.2
NUP58-206ENST00000463407 MCCP23508 829 aa16.28■□□□□ 0.2
NUP58-206ENST00000463407 ITPRIPQ8IWB1 547 aa16.28■□□□□ 0.2
NUP58-206ENST00000463407 TRIM44Q96DX7 344 aaPredicted RBP16.28■□□□□ 0.2
NUP58-206ENST00000463407 G3V3G9 751 aa16.28■□□□□ 0.2
NUP58-206ENST00000463407 DCAF8Q5TAQ9 597 aa16.28■□□□□ 0.2
NUP58-206ENST00000463407 CCDC146Q8IYE0 955 aa16.26■□□□□ 0.19
NUP58-206ENST00000463407 GORABQ5T7V8 394 aa16.26■□□□□ 0.19
NUP58-206ENST00000463407 PTMAP06454 111 aaKnown RBP16.25■□□□□ 0.19
NUP58-206ENST00000463407 MINK1Q8N4C8 1332 aaPredicted RBP16.24■□□□□ 0.19
NUP58-206ENST00000463407 COG3Q96JB2 828 aa16.24■□□□□ 0.19
NUP58-206ENST00000463407 GTF2E1P29083 439 aaPredicted RBP16.23■□□□□ 0.19
NUP58-206ENST00000463407 EVC2Q86UK5 1308 aa16.23■□□□□ 0.19
NUP58-206ENST00000463407 IGF1RP08069 1367 aa16.23■□□□□ 0.19
NUP58-206ENST00000463407 LMOD3Q0VAK6 560 aa16.23■□□□□ 0.19
NUP58-206ENST00000463407 SLC4A10Q6U841 1118 aa16.22■□□□□ 0.19
NUP58-206ENST00000463407 KIAA1211Q6ZU35 1233 aa16.22■□□□□ 0.19
NUP58-206ENST00000463407 NCAPD3P42695 1498 aa16.22■□□□□ 0.19
NUP58-206ENST00000463407 RCAN3Q9UKA8 241 aa16.21■□□□□ 0.19
NUP58-206ENST00000463407 C1orf141Q5JVX7 400 aa16.21■□□□□ 0.19
NUP58-206ENST00000463407 PSME1Q06323 249 aa16.21■□□□□ 0.19
NUP58-206ENST00000463407 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.21■□□□□ 0.19
NUP58-206ENST00000463407 SMC4Q9NTJ3 1288 aa16.21■□□□□ 0.19
NUP58-206ENST00000463407 MSH5O43196 834 aa16.21■□□□□ 0.18
NUP58-206ENST00000463407 CLSTN1O94985 981 aa16.21■□□□□ 0.18
NUP58-206ENST00000463407 HSCBQ8IWL3 235 aa16.2■□□□□ 0.18
NUP58-206ENST00000463407 CFAP44Q96MT7 982 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 118 ms