RNA–Protein interactions for RNA: ENST00000462438.1

RAE1-207, Transcript of ribonucleic acid export 1, humanhuman

TSL 2

Gene RAE1, Length 3,251 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1-207ENST00000462438 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.51■□□□□ 0.55
RAE1-207ENST00000462438 HNRNPUL2Q1KMD3 747 aaKnown RBP18.51■□□□□ 0.55
RAE1-207ENST00000462438 PLCH2O75038 1416 aa18.51■□□□□ 0.55
RAE1-207ENST00000462438 PTPN23Q9H3S7 1636 aa18.51■□□□□ 0.55
RAE1-207ENST00000462438 CCNB3Q8WWL7 1395 aa18.5■□□□□ 0.55
RAE1-207ENST00000462438 PCGF6Q9BYE7 350 aa18.49■□□□□ 0.55
RAE1-207ENST00000462438 PLEKHH2Q8IVE3 1493 aa18.48■□□□□ 0.55
RAE1-207ENST00000462438 ARHGEF5Q12774 1597 aa18.47■□□□□ 0.55
RAE1-207ENST00000462438 ARID3CA6NKF2 412 aa18.45■□□□□ 0.54
RAE1-207ENST00000462438 NEO1Q92859 1461 aa18.44■□□□□ 0.54
RAE1-207ENST00000462438 KIAA1107Q9UPP5 1409 aa18.44■□□□□ 0.54
RAE1-207ENST00000462438 PPRC1Q5VV67 1664 aaKnown RBP18.44■□□□□ 0.54
RAE1-207ENST00000462438 SAMD9LQ8IVG5 1584 aa18.43■□□□□ 0.54
RAE1-207ENST00000462438 CROCC2H7BZ55 1655 aa18.43■□□□□ 0.54
RAE1-207ENST00000462438 DNMT1P26358 1616 aaKnown RBP18.42■□□□□ 0.54
RAE1-207ENST00000462438 ABCC1P33527 1531 aa18.42■□□□□ 0.54
RAE1-207ENST00000462438 CAMSAP2Q08AD1 1489 aa18.41■□□□□ 0.54
RAE1-207ENST00000462438 ARHGAP5Q13017 1502 aa18.41■□□□□ 0.54
RAE1-207ENST00000462438 CD109Q6YHK3 1445 aa18.4■□□□□ 0.54
RAE1-207ENST00000462438 TRIM26Q12899 539 aaPredicted RBP18.4■□□□□ 0.54
RAE1-207ENST00000462438 TEX14Q8IWB6 1497 aa18.39■□□□□ 0.54
RAE1-207ENST00000462438 SHANK2Q9UPX8 1470 aa18.39■□□□□ 0.54
RAE1-207ENST00000462438 MAST1Q9Y2H9 1570 aa18.39■□□□□ 0.53
RAE1-207ENST00000462438 FANCAO15360 1455 aa18.36■□□□□ 0.53
RAE1-207ENST00000462438 AKNAQ7Z591 1439 aa18.35■□□□□ 0.53
RAE1-207ENST00000462438 MBD5Q9P267 1494 aa18.35■□□□□ 0.53
RAE1-207ENST00000462438 ADGBQ8N7X0 1667 aa18.35■□□□□ 0.53
RAE1-207ENST00000462438 CFDP1Q9UEE9 299 aaPredicted RBP18.34■□□□□ 0.53
RAE1-207ENST00000462438 RSPH4AQ5TD94 716 aa18.34■□□□□ 0.53
RAE1-207ENST00000462438 EFCAB2Q5VUJ9 269 aa18.34■□□□□ 0.53
RAE1-207ENST00000462438 KCNH8Q96L42 1107 aa18.33■□□□□ 0.52
RAE1-207ENST00000462438 ADGRL2O95490 1459 aa18.32■□□□□ 0.52
RAE1-207ENST00000462438 CCDC141Q6ZP82 1450 aa18.31■□□□□ 0.52
RAE1-207ENST00000462438 KDM5CP41229 1560 aa18.3■□□□□ 0.52
RAE1-207ENST00000462438 DAPK1P53355 1430 aa18.3■□□□□ 0.52
RAE1-207ENST00000462438 SYCP2Q9BX26 1530 aa18.3■□□□□ 0.52
RAE1-207ENST00000462438 PLXNC1O60486 1568 aa18.29■□□□□ 0.52
RAE1-207ENST00000462438 ROCK1Q13464 1354 aa18.29■□□□□ 0.52
RAE1-207ENST00000462438 RICTORQ6R327 1708 aa18.28■□□□□ 0.52
RAE1-207ENST00000462438 ABCC5O15440 1437 aa18.27■□□□□ 0.52
RAE1-207ENST00000462438 ZMYM4Q5VZL5 1548 aa18.27■□□□□ 0.52
RAE1-207ENST00000462438 GCC2Q8IWJ2 1684 aa18.27■□□□□ 0.52
RAE1-207ENST00000462438 ADGRL1O94910 1474 aa18.27■□□□□ 0.52
RAE1-207ENST00000462438 ARHGEF12Q9NZN5 1544 aa18.27■□□□□ 0.52
RAE1-207ENST00000462438 FAM69CQ0P6D2 419 aa18.27■□□□□ 0.51
RAE1-207ENST00000462438 INO80Q9ULG1 1556 aaPredicted RBP18.27■□□□□ 0.51
RAE1-207ENST00000462438 RTEL1-TNFRSF6BF6WH68 1400 aa18.26■□□□□ 0.51
RAE1-207ENST00000462438 ZNF518AQ6AHZ1 1483 aa18.25■□□□□ 0.51
RAE1-207ENST00000462438 POGZQ7Z3K3 1410 aa18.25■□□□□ 0.51
RAE1-207ENST00000462438 FRMPD1Q5SYB0 1578 aa18.22■□□□□ 0.51
RAE1-207ENST00000462438 TSPOAP1O95153 1857 aa18.22■□□□□ 0.51
RAE1-207ENST00000462438 ZFYVE16Q7Z3T8 1539 aa18.21■□□□□ 0.51
RAE1-207ENST00000462438 MLH3Q9UHC1 1453 aa18.21■□□□□ 0.51
RAE1-207ENST00000462438 ACIN1Q9UKV3 1341 aaKnown RBP18.21■□□□□ 0.51
RAE1-207ENST00000462438 DENND4BO75064 1496 aaPredicted RBP18.21■□□□□ 0.51
RAE1-207ENST00000462438 PTPRKQ15262 1439 aa18.2■□□□□ 0.5
RAE1-207ENST00000462438 MAGI2Q86UL8 1455 aa18.2■□□□□ 0.5
RAE1-207ENST00000462438 HECW2Q9P2P5 1572 aa18.19■□□□□ 0.5
RAE1-207ENST00000462438 HFM1A2PYH4 1435 aa18.19■□□□□ 0.5
RAE1-207ENST00000462438 SCAPERQ9BY12 1400 aa18.19■□□□□ 0.5
RAE1-207ENST00000462438 C9orf84Q5VXU9 1444 aa18.19■□□□□ 0.5
RAE1-207ENST00000462438 ZNF644Q9H582 1327 aaPredicted RBP18.18■□□□□ 0.5
RAE1-207ENST00000462438 BCORL1Q5H9F3 1711 aa18.18■□□□□ 0.5
RAE1-207ENST00000462438 REREQ9P2R6 1566 aa18.17■□□□□ 0.5
RAE1-207ENST00000462438 FAM50AQ14320 339 aaKnown RBP18.17■□□□□ 0.5
RAE1-207ENST00000462438 TRAPPC8Q9Y2L5 1435 aa18.17■□□□□ 0.5
RAE1-207ENST00000462438 ATP7AQ04656 1500 aa18.17■□□□□ 0.5
RAE1-207ENST00000462438 KIDINS220Q9ULH0 1771 aa18.16■□□□□ 0.5
RAE1-207ENST00000462438 NCOA1Q15788 1441 aa18.15■□□□□ 0.5
RAE1-207ENST00000462438 EIF2AK4Q9P2K8 1649 aaKnown RBP18.15■□□□□ 0.5
RAE1-207ENST00000462438 PRKCSHP14314 528 aaPredicted RBP18.14■□□□□ 0.49
RAE1-207ENST00000462438 ANKRD30AQ9BXX3 1397 aa18.13■□□□□ 0.49
RAE1-207ENST00000462438 DUOX2Q9NRD8 1548 aa18.13■□□□□ 0.49
RAE1-207ENST00000462438 NAIPQ13075 1403 aa18.12■□□□□ 0.49
RAE1-207ENST00000462438 ZNF777Q9ULD5 760 aaPredicted RBP18.11■□□□□ 0.49
RAE1-207ENST00000462438 ERBINQ96RT1 1412 aa18.1■□□□□ 0.49
RAE1-207ENST00000462438 HNRNPMP52272 730 aaKnown RBP eCLIP18.1■□□□□ 0.49
RAE1-207ENST00000462438 TSPY4P0CV99 314 aa18.09■□□□□ 0.49
RAE1-207ENST00000462438 TSPY10P0CW01 314 aa18.09■□□□□ 0.49
RAE1-207ENST00000462438 SETD5Q9C0A6 1442 aa18.09■□□□□ 0.49
RAE1-207ENST00000462438 ARHGEF40Q8TER5 1519 aa18.08■□□□□ 0.49
RAE1-207ENST00000462438 DIP2CQ9Y2E4 1556 aa18.08■□□□□ 0.48
RAE1-207ENST00000462438 ABCA6Q8N139 1617 aa18.08■□□□□ 0.48
RAE1-207ENST00000462438 BCL11AQ9H165 835 aa18.08■□□□□ 0.48
RAE1-207ENST00000462438 KDM6BO15054 1643 aa18.07■□□□□ 0.48
RAE1-207ENST00000462438 DEPDC5O75140 1603 aa18.07■□□□□ 0.48
RAE1-207ENST00000462438 UNC13BO14795 1591 aa18.06■□□□□ 0.48
RAE1-207ENST00000462438 KDM5DQ9BY66 1539 aa18.06■□□□□ 0.48
RAE1-207ENST00000462438 SPAG9O60271 1321 aaKnown RBP18.06■□□□□ 0.48
RAE1-207ENST00000462438 FAM135AQ9P2D6 1515 aa18.05■□□□□ 0.48
RAE1-207ENST00000462438 RNF17Q9BXT8 1623 aaKnown RBP18.04■□□□□ 0.48
RAE1-207ENST00000462438 COL17A1Q9UMD9 1497 aaPredicted RBP18.04■□□□□ 0.48
RAE1-207ENST00000462438 AGLP35573 1532 aa18.04■□□□□ 0.48
RAE1-207ENST00000462438 KIF15Q9NS87 1388 aa18.03■□□□□ 0.48
RAE1-207ENST00000462438 ANKRD50Q9ULJ7 1429 aa18■□□□□ 0.47
RAE1-207ENST00000462438 DHX29Q7Z478 1369 aaKnown RBP18■□□□□ 0.47
RAE1-207ENST00000462438 AFAP1Q8N556 730 aa17.99■□□□□ 0.47
RAE1-207ENST00000462438 A2MP01023 1474 aa17.99■□□□□ 0.47
RAE1-207ENST00000462438 ATP10AO60312 1499 aa17.98■□□□□ 0.47
RAE1-207ENST00000462438 TRHP20396 242 aaPredicted RBP17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms