RNA–Protein interactions for RNA: ENST00000462112.1

SSR1-203, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4 BASIC

Gene SSR1, Length 1,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-203ENST00000462112 EFCAB2Q5VUJ9 269 aa12.83□□□□□ -0.36
SSR1-203ENST00000462112 NEO1Q92859 1461 aa12.83□□□□□ -0.36
SSR1-203ENST00000462112 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.81□□□□□ -0.368e-6■□□□□ 10.5
SSR1-203ENST00000462112 MAPK8IP2Q13387 824 aaPredicted RBP12.8□□□□□ -0.36
SSR1-203ENST00000462112 PPRC1Q5VV67 1664 aaKnown RBP12.8□□□□□ -0.36
SSR1-203ENST00000462112 FANCAO15360 1455 aa12.79□□□□□ -0.36
SSR1-203ENST00000462112 MYO5CQ9NQX4 1742 aa12.79□□□□□ -0.36
SSR1-203ENST00000462112 PLCH2O75038 1416 aa12.79□□□□□ -0.36
SSR1-203ENST00000462112 LRRIQ1Q96JM4 1722 aa12.78□□□□□ -0.36
SSR1-203ENST00000462112 EHBP1L1Q8N3D4 1523 aa12.78□□□□□ -0.36
SSR1-203ENST00000462112 ARAP3Q8WWN8 1544 aa12.78□□□□□ -0.36
SSR1-203ENST00000462112 CCNB3Q8WWL7 1395 aa12.77□□□□□ -0.37
SSR1-203ENST00000462112 AKNAQ7Z591 1439 aa12.76□□□□□ -0.37
SSR1-203ENST00000462112 ARHGAP5Q13017 1502 aa12.76□□□□□ -0.37
SSR1-203ENST00000462112 MAP3K1Q13233 1512 aa12.76□□□□□ -0.37
SSR1-203ENST00000462112 TTC37Q6PGP7 1564 aa12.76□□□□□ -0.37
SSR1-203ENST00000462112 DENND4BO75064 1496 aaPredicted RBP12.74□□□□□ -0.37
SSR1-203ENST00000462112 CFDP1Q9UEE9 299 aaPredicted RBP12.74□□□□□ -0.37
SSR1-203ENST00000462112 TIAM1Q13009 1591 aa12.73□□□□□ -0.37
SSR1-203ENST00000462112 MYT1LQ9UL68 1186 aa12.73□□□□□ -0.37
SSR1-203ENST00000462112 ADGRL1O94910 1474 aa12.72□□□□□ -0.37
SSR1-203ENST00000462112 SUPT6HQ7KZ85 1726 aaKnown RBP12.72□□□□□ -0.37
SSR1-203ENST00000462112 ZNF777Q9ULD5 760 aaPredicted RBP12.71□□□□□ -0.37
SSR1-203ENST00000462112 PLEKHH2Q8IVE3 1493 aa12.71□□□□□ -0.38
SSR1-203ENST00000462112 SCAPERQ9BY12 1400 aa12.71□□□□□ -0.38
SSR1-203ENST00000462112 LRRC9Q6ZRR7 1453 aa12.7□□□□□ -0.38
SSR1-203ENST00000462112 ITSN2Q9NZM3 1697 aa12.7□□□□□ -0.38
SSR1-203ENST00000462112 PREX2Q70Z35 1606 aa12.7□□□□□ -0.38
SSR1-203ENST00000462112 RAPGEF3O95398 923 aa12.69□□□□□ -0.38
SSR1-203ENST00000462112 ZNF518AQ6AHZ1 1483 aa12.67□□□□□ -0.38
SSR1-203ENST00000462112 MAGI2Q86UL8 1455 aa12.67□□□□□ -0.38
SSR1-203ENST00000462112 COL17A1Q9UMD9 1497 aaPredicted RBP12.67□□□□□ -0.38
SSR1-203ENST00000462112 RSPH4AQ5TD94 716 aa12.67□□□□□ -0.38
SSR1-203ENST00000462112 GPATCH8Q9UKJ3 1502 aaKnown RBP12.67□□□□□ -0.38
SSR1-203ENST00000462112 NCOA2Q15596 1464 aa12.66□□□□□ -0.38
SSR1-203ENST00000462112 CDC42BPAQ5VT25 1732 aa12.66□□□□□ -0.38
SSR1-203ENST00000462112 CDC42BPBQ9Y5S2 1711 aa12.65□□□□□ -0.38
SSR1-203ENST00000462112 POGZQ7Z3K3 1410 aa12.64□□□□□ -0.39
SSR1-203ENST00000462112 ARID4BQ4LE39 1312 aaPredicted RBP12.63□□□□□ -0.39
SSR1-203ENST00000462112 KIAA1107Q9UPP5 1409 aa12.63□□□□□ -0.39
SSR1-203ENST00000462112 KANK4Q5T7N3 995 aaPredicted RBP12.62□□□□□ -0.39
SSR1-203ENST00000462112 RICTORQ6R327 1708 aa12.62□□□□□ -0.39
SSR1-203ENST00000462112 TSPY4P0CV99 314 aa12.61□□□□□ -0.39
SSR1-203ENST00000462112 TSPY10P0CW01 314 aa12.61□□□□□ -0.39
SSR1-203ENST00000462112 ABCC1P33527 1531 aa12.61□□□□□ -0.39
SSR1-203ENST00000462112 ZMYM4Q5VZL5 1548 aa12.61□□□□□ -0.39
SSR1-203ENST00000462112 ZFYVE16Q7Z3T8 1539 aa12.61□□□□□ -0.39
SSR1-203ENST00000462112 MIA2Q96PC5 1412 aa12.61□□□□□ -0.39
SSR1-203ENST00000462112 SPAG9O60271 1321 aaKnown RBP12.61□□□□□ -0.39
SSR1-203ENST00000462112 HNRNPMP52272 730 aaKnown RBP eCLIP12.6□□□□□ -0.39
SSR1-203ENST00000462112 AFAP1Q8N556 730 aa12.6□□□□□ -0.39
SSR1-203ENST00000462112 DMRT2Q9Y5R5 561 aa12.6□□□□□ -0.39
SSR1-203ENST00000462112 MYOM3Q5VTT5 1437 aa12.6□□□□□ -0.39
SSR1-203ENST00000462112 ARHGEF40Q8TER5 1519 aa12.57□□□□□ -0.4
SSR1-203ENST00000462112 SYCP2Q9BX26 1530 aa12.57□□□□□ -0.4
SSR1-203ENST00000462112 FRMPD1Q5SYB0 1578 aa12.57□□□□□ -0.4
SSR1-203ENST00000462112 SAMD9LQ8IVG5 1584 aa12.57□□□□□ -0.4
SSR1-203ENST00000462112 HECW2Q9P2P5 1572 aa12.57□□□□□ -0.4
SSR1-203ENST00000462112 ATP10AO60312 1499 aa12.57□□□□□ -0.4
SSR1-203ENST00000462112 MLH3Q9UHC1 1453 aa12.57□□□□□ -0.4
SSR1-203ENST00000462112 KDM5CP41229 1560 aa12.56□□□□□ -0.4
SSR1-203ENST00000462112 ZBTB22O15209 634 aa12.56□□□□□ -0.4
SSR1-203ENST00000462112 ESF1Q9H501 851 aaKnown RBP12.56□□□□□ -0.4
SSR1-203ENST00000462112 C9orf84Q5VXU9 1444 aa12.55□□□□□ -0.4
SSR1-203ENST00000462112 TRAPPC8Q9Y2L5 1435 aa12.55□□□□□ -0.4
SSR1-203ENST00000462112 CAMSAP2Q08AD1 1489 aa12.55□□□□□ -0.4
SSR1-203ENST00000462112 RNF216Q9NWF9 866 aaPredicted RBP12.55□□□□□ -0.4
SSR1-203ENST00000462112 CCDC141Q6ZP82 1450 aa12.54□□□□□ -0.4
SSR1-203ENST00000462112 ZNF644Q9H582 1327 aaPredicted RBP12.54□□□□□ -0.4
SSR1-203ENST00000462112 RTEL1-TNFRSF6BF6WH68 1400 aa12.53□□□□□ -0.4
SSR1-203ENST00000462112 ARHGEF12Q9NZN5 1544 aa12.52□□□□□ -0.4
SSR1-203ENST00000462112 YEATS2Q9ULM3 1422 aa12.52□□□□□ -0.41
SSR1-203ENST00000462112 FAM50AQ14320 339 aaKnown RBP12.51□□□□□ -0.41
SSR1-203ENST00000462112 FGD6Q6ZV73 1430 aa12.51□□□□□ -0.41
SSR1-203ENST00000462112 ATP7AQ04656 1500 aa12.51□□□□□ -0.41
SSR1-203ENST00000462112 ARHGEF5Q12774 1597 aa12.51□□□□□ -0.41
SSR1-203ENST00000462112 MBD5Q9P267 1494 aa12.5□□□□□ -0.41
SSR1-203ENST00000462112 PTPN23Q9H3S7 1636 aa12.49□□□□□ -0.41
SSR1-203ENST00000462112 REREQ9P2R6 1566 aa12.48□□□□□ -0.41
SSR1-203ENST00000462112 MLECQ14165 292 aa12.48□□□□□ -0.41
SSR1-203ENST00000462112 DIP2CQ9Y2E4 1556 aa12.47□□□□□ -0.41
SSR1-203ENST00000462112 KDM4FA0A1W2PPD8 638 aa12.47□□□□□ -0.41
SSR1-203ENST00000462112 KIDINS220Q9ULH0 1771 aa12.47□□□□□ -0.41
SSR1-203ENST00000462112 ADGBQ8N7X0 1667 aa12.47□□□□□ -0.41
SSR1-203ENST00000462112 A2MP01023 1474 aa12.46□□□□□ -0.41
SSR1-203ENST00000462112 INO80Q9ULG1 1556 aaPredicted RBP12.46□□□□□ -0.42
SSR1-203ENST00000462112 AGLP35573 1532 aa12.46□□□□□ -0.42
SSR1-203ENST00000462112 TCOF1Q13428 1488 aaKnown RBP12.46□□□□□ -0.42
SSR1-203ENST00000462112 ABCA6Q8N139 1617 aa12.45□□□□□ -0.42
SSR1-203ENST00000462112 PPARGC1BQ86YN6 1023 aaKnown RBP12.45□□□□□ -0.42
SSR1-203ENST00000462112 BCORL1Q5H9F3 1711 aa12.45□□□□□ -0.42
SSR1-203ENST00000462112 DHX29Q7Z478 1369 aaKnown RBP12.44□□□□□ -0.42
SSR1-203ENST00000462112 ANKRD30AQ9BXX3 1397 aa12.44□□□□□ -0.42
SSR1-203ENST00000462112 SHANK2Q9UPX8 1470 aa12.43□□□□□ -0.42
SSR1-203ENST00000462112 DAPK1P53355 1430 aa12.43□□□□□ -0.42
SSR1-203ENST00000462112 CNTLNQ9NXG0 1405 aa12.43□□□□□ -0.42
SSR1-203ENST00000462112 MAST1Q9Y2H9 1570 aa12.43□□□□□ -0.42
SSR1-203ENST00000462112 GGT6Q6P531 493 aa12.42□□□□□ -0.42
SSR1-203ENST00000462112 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.42□□□□□ -0.42
SSR1-203ENST00000462112 DNMT1P26358 1616 aaKnown RBP12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms