RNA–Protein interactions for RNA: ENST00000461674.5

LRCH3-210, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 537 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-210ENST00000461674 IGSF3O75054 1194 aa11.83□□□□□ -0.52
LRCH3-210ENST00000461674 PDE4AP27815 886 aa11.83□□□□□ -0.52
LRCH3-210ENST00000461674 CAMK2BQ13554 666 aa11.83□□□□□ -0.52
LRCH3-210ENST00000461674 FBXO22Q8NEZ5 403 aa11.82□□□□□ -0.52
LRCH3-210ENST00000461674 SERPINA10Q9UK55 444 aa11.82□□□□□ -0.52
LRCH3-210ENST00000461674 MTMR7Q9Y216 660 aa11.82□□□□□ -0.52
LRCH3-210ENST00000461674 PELP1Q8IZL8 1130 aaKnown RBP11.81□□□□□ -0.52
LRCH3-210ENST00000461674 CCDC97Q96F63 343 aaPredicted RBP11.81□□□□□ -0.52
LRCH3-210ENST00000461674 NLRP6P59044 892 aa11.8□□□□□ -0.52
LRCH3-210ENST00000461674 MFAP1P55081 439 aaKnown RBP11.79□□□□□ -0.52
LRCH3-210ENST00000461674 DDX27Q96GQ7 796 aaKnown RBP11.79□□□□□ -0.52
LRCH3-210ENST00000461674 MCM6Q14566 821 aa11.77□□□□□ -0.53
LRCH3-210ENST00000461674 AMHR2Q16671 573 aa11.77□□□□□ -0.53
LRCH3-210ENST00000461674 PROSER2Q86WR7 435 aaPredicted RBP11.77□□□□□ -0.53
LRCH3-210ENST00000461674 CRISPLD2Q9H0B8 497 aa11.77□□□□□ -0.53
LRCH3-210ENST00000461674 GPR37O15354 613 aa11.76□□□□□ -0.53
LRCH3-210ENST00000461674 PARP9Q8IXQ6 854 aa11.75□□□□□ -0.53
LRCH3-210ENST00000461674 SPDYE1Q8NFV5 336 aaPredicted RBP11.75□□□□□ -0.53
LRCH3-210ENST00000461674 MINK1Q8N4C8 1332 aaPredicted RBP11.75□□□□□ -0.53
LRCH3-210ENST00000461674 PSEN1P49768 467 aa11.74□□□□□ -0.53
LRCH3-210ENST00000461674 RETREG2Q8NC44 543 aa11.73□□□□□ -0.53
LRCH3-210ENST00000461674 GZF1Q9H116 711 aaPredicted RBP11.73□□□□□ -0.53
LRCH3-210ENST00000461674 ZNF777Q9ULD5 760 aaPredicted RBP11.73□□□□□ -0.53
LRCH3-210ENST00000461674 SOX12O15370 315 aa11.72□□□□□ -0.53
LRCH3-210ENST00000461674 RBM25P49756 843 aaKnown RBP11.72□□□□□ -0.53
LRCH3-210ENST00000461674 CCDC102AQ96A19 550 aa11.72□□□□□ -0.53
LRCH3-210ENST00000461674 PCMTD1Q96MG8 357 aaPredicted RBP11.72□□□□□ -0.53
LRCH3-210ENST00000461674 MAP2K5Q13163 448 aa11.7□□□□□ -0.54
LRCH3-210ENST00000461674 FOXD4L5Q5VV16 416 aaPredicted RBP11.7□□□□□ -0.54
LRCH3-210ENST00000461674 FNBP4Q8N3X1 1017 aaPredicted RBP11.7□□□□□ -0.54
LRCH3-210ENST00000461674 FOXD4L4Q8WXT5 416 aaPredicted RBP11.7□□□□□ -0.54
LRCH3-210ENST00000461674 HMGB1P09429 215 aaKnown RBP11.69□□□□□ -0.54
LRCH3-210ENST00000461674 PRR29P0C7W0 189 aa11.69□□□□□ -0.54
LRCH3-210ENST00000461674 PCDHB8Q9UN66 801 aa11.69□□□□□ -0.54
LRCH3-210ENST00000461674 PHF8Q9UPP1 1060 aa11.69□□□□□ -0.54
LRCH3-210ENST00000461674 PCDHB13Q9Y5F0 798 aa11.69□□□□□ -0.54
LRCH3-210ENST00000461674 EFCAB3Q8N7B9 438 aa11.67□□□□□ -0.54
LRCH3-210ENST00000461674 ZNF428Q96B54 188 aa11.66□□□□□ -0.54
LRCH3-210ENST00000461674 ZNF579Q8NAF0 562 aaKnown RBP11.65□□□□□ -0.54
LRCH3-210ENST00000461674 IRF6O14896 467 aa11.64□□□□□ -0.55
LRCH3-210ENST00000461674 IRF5Q13568 498 aa11.64□□□□□ -0.55
LRCH3-210ENST00000461674 SPDYE16A6NNV3 312 aaPredicted RBP11.63□□□□□ -0.55
LRCH3-210ENST00000461674 E9PSI1 815 aa11.63□□□□□ -0.55
LRCH3-210ENST00000461674 MYT1Q01538 1121 aa11.63□□□□□ -0.55
LRCH3-210ENST00000461674 FBXW7Q969H0 707 aa11.63□□□□□ -0.55
LRCH3-210ENST00000461674 PATL2C9JE40 543 aaKnown RBP11.62□□□□□ -0.55
LRCH3-210ENST00000461674 PDIA6Q15084 440 aa11.61□□□□□ -0.55
LRCH3-210ENST00000461674 PLSCR2Q9NRY7 297 aa11.61□□□□□ -0.55
LRCH3-210ENST00000461674 PDE4CQ08493 712 aa11.59□□□□□ -0.55
LRCH3-210ENST00000461674 POM121Q96HA1 1249 aa11.59□□□□□ -0.55
LRCH3-210ENST00000461674 CLEC11AQ9Y240 323 aa11.59□□□□□ -0.55
LRCH3-210ENST00000461674 HSP90B1P14625 803 aaKnown RBP11.58□□□□□ -0.56
LRCH3-210ENST00000461674 TTLL12Q14166 644 aaPredicted RBP11.58□□□□□ -0.56
LRCH3-210ENST00000461674 SH3D19Q5HYK7 790 aa11.58□□□□□ -0.56
LRCH3-210ENST00000461674 CABP2Q9NPB3 220 aa11.58□□□□□ -0.56
LRCH3-210ENST00000461674 PPP1R15AO75807 674 aaPredicted RBP11.57□□□□□ -0.56
LRCH3-210ENST00000461674 TTBK1Q5TCY1 1321 aaPredicted RBP11.56□□□□□ -0.56
LRCH3-210ENST00000461674 CDK11BP21127 795 aaKnown RBP11.55□□□□□ -0.56
LRCH3-210ENST00000461674 TSPYL2Q9H2G4 693 aaPredicted RBP11.55□□□□□ -0.56
LRCH3-210ENST00000461674 CDK11AQ9UQ88 783 aaPredicted RBP11.55□□□□□ -0.56
LRCH3-210ENST00000461674 DPYSL4O14531 572 aa11.54□□□□□ -0.56
LRCH3-210ENST00000461674 GIGYF2Q6Y7W6 1299 aaKnown RBP11.54□□□□□ -0.56
LRCH3-210ENST00000461674 GNPATO15228 680 aa11.53□□□□□ -0.56
LRCH3-210ENST00000461674 MS4A1P11836 297 aa11.53□□□□□ -0.56
LRCH3-210ENST00000461674 PPP1R15BQ5SWA1 713 aa11.53□□□□□ -0.56
LRCH3-210ENST00000461674 MS4A4AQ96JQ5 239 aa11.51□□□□□ -0.57
LRCH3-210ENST00000461674 PUS7Q96PZ0 661 aaKnown RBP11.51□□□□□ -0.57
LRCH3-210ENST00000461674 AMOTL2Q9Y2J4 779 aa11.5□□□□□ -0.57
LRCH3-210ENST00000461674 NUTM2FA1L443 756 aa11.49□□□□□ -0.57
LRCH3-210ENST00000461674 SPDYE5A6NIY4 337 aa11.49□□□□□ -0.57
LRCH3-210ENST00000461674 KCNA1Q09470 495 aa11.49□□□□□ -0.57
LRCH3-210ENST00000461674 OXER1Q8TDS5 423 aa11.49□□□□□ -0.57
LRCH3-210ENST00000461674 COG6Q9Y2V7 657 aa11.49□□□□□ -0.57
LRCH3-210ENST00000461674 HIC1Q14526 733 aa11.48□□□□□ -0.57
LRCH3-210ENST00000461674 EMILIN3Q9NT22 766 aa11.47□□□□□ -0.57
LRCH3-210ENST00000461674 ZNF330Q9Y3S2 320 aaPredicted RBP11.47□□□□□ -0.57
LRCH3-210ENST00000461674 ACIN1Q9UKV3 1341 aaKnown RBP11.46□□□□□ -0.57
LRCH3-210ENST00000461674 SKIV2LQ15477 1246 aaKnown RBP11.46□□□□□ -0.57
LRCH3-210ENST00000461674 CCDC61Q9Y6R9 512 aa11.45□□□□□ -0.58
LRCH3-210ENST00000461674 FCHSD2O94868 740 aa11.44□□□□□ -0.58
LRCH3-210ENST00000461674 AKT1S1Q96B36 256 aa11.44□□□□□ -0.58
LRCH3-210ENST00000461674 BRD1O95696 1058 aa11.43□□□□□ -0.58
LRCH3-210ENST00000461674 GPHNQ9NQX3 736 aaPredicted RBP11.43□□□□□ -0.58
LRCH3-210ENST00000461674 FECHP22830 423 aa11.41□□□□□ -0.58
LRCH3-210ENST00000461674 IFNL1Q8IU54 200 aa11.41□□□□□ -0.58
LRCH3-210ENST00000461674 REPIN1Q9BWE0 567 aaKnown RBP11.39□□□□□ -0.59
LRCH3-210ENST00000461674 USP35Q9P2H5 1018 aa11.39□□□□□ -0.59
LRCH3-210ENST00000461674 USTQ9Y2C2 406 aa11.39□□□□□ -0.59
LRCH3-210ENST00000461674 GRXCR2A6NFK2 248 aa11.37□□□□□ -0.59
LRCH3-210ENST00000461674 CCDC27Q2M243 656 aa11.37□□□□□ -0.59
LRCH3-210ENST00000461674 BANK1Q8NDB2 785 aa11.37□□□□□ -0.59
LRCH3-210ENST00000461674 RSPH4AQ5TD94 716 aa11.35□□□□□ -0.59
LRCH3-210ENST00000461674 TMUB1Q9BVT8 246 aa11.35□□□□□ -0.59
LRCH3-210ENST00000461674 WWC1Q8IX03 1113 aa11.34□□□□□ -0.59
LRCH3-210ENST00000461674 PROCA1Q8NCQ7 364 aaPredicted RBP11.34□□□□□ -0.59
LRCH3-210ENST00000461674 CALR3Q96L12 384 aaKnown RBP11.34□□□□□ -0.59
LRCH3-210ENST00000461674 EIF5BO60841 1220 aaKnown RBP11.33□□□□□ -0.6
LRCH3-210ENST00000461674 OSBPP22059 807 aa11.33□□□□□ -0.6
LRCH3-210ENST00000461674 CLCN1P35523 988 aa11.33□□□□□ -0.6
LRCH3-210ENST00000461674 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms