RNA–Protein interactions for RNA: ENST00000461044.5

FXR1-204, Transcript of FMR1 autosomal homolog 1, human

TSL 4

Gene FXR1, Length 601 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FXR1-204	ENST00000461044	RYDEN	Q9NUL5	291 aa	Known RBP	7.41	□□□□□ -1.22
FXR1-204	ENST00000461044	ST18	O60284	1047 aa		7.4	□□□□□ -1.22
FXR1-204	ENST00000461044	CADPS2	Q86UW7	1296 aa		7.39	□□□□□ -1.23
FXR1-204	ENST00000461044	SPRYD3	Q8NCJ5	442 aa		7.37	□□□□□ -1.23
FXR1-204	ENST00000461044	NCKAP5L	Q9HCH0	1330 aa		7.36	□□□□□ -1.23
FXR1-204	ENST00000461044	SNPH	O15079	494 aa		7.36	□□□□□ -1.23
FXR1-204	ENST00000461044	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	7.36	□□□□□ -1.23
FXR1-204	ENST00000461044	CRISPLD2	Q9H0B8	497 aa		7.36	□□□□□ -1.23
FXR1-204	ENST00000461044	GPHN	Q9NQX3	736 aa	Predicted RBP	7.36	□□□□□ -1.23
FXR1-204	ENST00000461044	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	7.36	□□□□□ -1.23
FXR1-204	ENST00000461044	TMC2	Q8TDI7	906 aa		7.34	□□□□□ -1.23
FXR1-204	ENST00000461044	CFAP44	Q96MT7	982 aa		7.34	□□□□□ -1.23
FXR1-204	ENST00000461044	FOXK1	P85037	733 aa		7.33	□□□□□ -1.24
FXR1-204	ENST00000461044	DSG2	Q14126	1118 aa		7.33	□□□□□ -1.24
FXR1-204	ENST00000461044	POTEG	Q6S5H5	508 aa		7.32	□□□□□ -1.24
FXR1-204	ENST00000461044	POTEM	A6NI47	508 aa		7.31	□□□□□ -1.24
FXR1-204	ENST00000461044	DOK7	Q18PE1	504 aa		7.31	□□□□□ -1.24
FXR1-204	ENST00000461044	GPR153	Q6NV75	609 aa		7.31	□□□□□ -1.24
FXR1-204	ENST00000461044	POTEB3	A0JP26	581 aa		7.3	□□□□□ -1.24
FXR1-204	ENST00000461044	POTEB	Q6S5H4	581 aa		7.3	□□□□□ -1.24
FXR1-204	ENST00000461044	PLPP6	Q8IY26	295 aa		7.3	□□□□□ -1.24
FXR1-204	ENST00000461044	SLC34A2	O95436	690 aa		7.29	□□□□□ -1.24
FXR1-204	ENST00000461044	HOXB1	P14653	301 aa	Predicted RBP	7.29	□□□□□ -1.24
FXR1-204	ENST00000461044	PDE4A	P27815	886 aa		7.29	□□□□□ -1.24
FXR1-204	ENST00000461044	MFSD10	Q14728	455 aa		7.29	□□□□□ -1.24
FXR1-204	ENST00000461044	KHSRP	Q92945	711 aa	Known RBP eCLIP	7.29	□□□□□ -1.24	2e-6	■■■■□ 20.7
FXR1-204	ENST00000461044	MARVELD3	Q96A59	401 aa		7.29	□□□□□ -1.24
FXR1-204	ENST00000461044	ARSI	Q5FYB1	569 aa		7.28	□□□□□ -1.24
FXR1-204	ENST00000461044	LARP6	Q9BRS8	491 aa	Known RBP	7.28	□□□□□ -1.24
FXR1-204	ENST00000461044	ZSWIM6	Q9HCJ5	1215 aa		7.27	□□□□□ -1.25
FXR1-204	ENST00000461044	TSHZ2	Q9NRE2	1034 aa		7.27	□□□□□ -1.25
FXR1-204	ENST00000461044	KDM4F	A0A1W2PPD8	638 aa		7.26	□□□□□ -1.25
FXR1-204	ENST00000461044	PPP1R15B	Q5SWA1	713 aa		7.26	□□□□□ -1.25
FXR1-204	ENST00000461044	ZNF710	Q8N1W2	664 aa		7.26	□□□□□ -1.25
FXR1-204	ENST00000461044	PTCD2	Q8WV60	388 aa	Known RBP	7.25	□□□□□ -1.25
FXR1-204	ENST00000461044	PCDHGA4	Q9Y5G9	962 aa		7.25	□□□□□ -1.25
FXR1-204	ENST00000461044	RIMBP2	O15034	1052 aa		7.23	□□□□□ -1.25
FXR1-204	ENST00000461044	PLCB2	Q00722	1185 aa		7.23	□□□□□ -1.25
FXR1-204	ENST00000461044	OXER1	Q8TDS5	423 aa		7.23	□□□□□ -1.25
FXR1-204	ENST00000461044	DDX27	Q96GQ7	796 aa	Known RBP	7.23	□□□□□ -1.25
FXR1-204	ENST00000461044	EMP3	P54852	163 aa		7.22	□□□□□ -1.25
FXR1-204	ENST00000461044	EMILIN3	Q9NT22	766 aa		7.22	□□□□□ -1.25
FXR1-204	ENST00000461044	FAM205C	A6NFA0	338 aa		7.2	□□□□□ -1.26
FXR1-204	ENST00000461044	NUDT7	P0C024	238 aa		7.2	□□□□□ -1.26
FXR1-204	ENST00000461044	CAMK2B	Q13554	666 aa		7.2	□□□□□ -1.26
FXR1-204	ENST00000461044	HS3ST6	Q96QI5	342 aa		7.2	□□□□□ -1.26
FXR1-204	ENST00000461044	CDAN1	Q8IWY9	1227 aa		7.18	□□□□□ -1.26
FXR1-204	ENST00000461044	UPF1	Q92900	1129 aa	Known RBP eCLIP	7.18	□□□□□ -1.26
FXR1-204	ENST00000461044	ZNF316	A6NFI3	1004 aa	Predicted RBP	7.17	□□□□□ -1.26
FXR1-204	ENST00000461044	LHX6	Q9UPM6	363 aa		7.17	□□□□□ -1.26
FXR1-204	ENST00000461044	VARS2	Q5ST30	1063 aa	Known RBP	7.16	□□□□□ -1.26
FXR1-204	ENST00000461044	ERBB3	P21860	1342 aa		7.16	□□□□□ -1.26
FXR1-204	ENST00000461044	ANO8	Q9HCE9	1232 aa	Predicted RBP	7.15	□□□□□ -1.26
FXR1-204	ENST00000461044	TBC1D12	O60347	775 aa		7.14	□□□□□ -1.27
FXR1-204	ENST00000461044	KRTAP3-3	Q9BYR6	98 aa		7.14	□□□□□ -1.27
FXR1-204	ENST00000461044	KRTAP3-2	Q9BYR7	98 aa		7.14	□□□□□ -1.27
FXR1-204	ENST00000461044	PCDH10	Q9P2E7	1040 aa		7.14	□□□□□ -1.27
FXR1-204	ENST00000461044	POTEE	Q6S8J3	1075 aa		7.12	□□□□□ -1.27
FXR1-204	ENST00000461044	ZNF687	Q8N1G0	1237 aa		7.12	□□□□□ -1.27
FXR1-204	ENST00000461044	DPYSL4	O14531	572 aa		7.11	□□□□□ -1.27
FXR1-204	ENST00000461044	EVI5	O60447	810 aa		7.11	□□□□□ -1.27
FXR1-204	ENST00000461044	MAP3K9	P80192	1104 aa		7.11	□□□□□ -1.27
FXR1-204	ENST00000461044	E2F4	Q16254	413 aa		7.11	□□□□□ -1.27
FXR1-204	ENST00000461044	KDM2A	Q9Y2K7	1162 aa		7.1	□□□□□ -1.27
FXR1-204	ENST00000461044	ARIH1	Q9Y4X5	557 aa	Predicted RBP	7.1	□□□□□ -1.27
FXR1-204	ENST00000461044	WDR70	Q9NW82	654 aa		7.09	□□□□□ -1.27
FXR1-204	ENST00000461044	HAP1	P54257	671 aa	Predicted RBP	7.08	□□□□□ -1.28
FXR1-204	ENST00000461044	FOSB	P53539	338 aa		7.07	□□□□□ -1.28
FXR1-204	ENST00000461044	AXIN2	Q9Y2T1	843 aa		7.05	□□□□□ -1.28
FXR1-204	ENST00000461044	PSD	A5PKW4	1024 aa	Predicted RBP	7.04	□□□□□ -1.28
FXR1-204	ENST00000461044	PTGER2	P43116	358 aa		7.04	□□□□□ -1.28
FXR1-204	ENST00000461044	PDIA6	Q15084	440 aa		7.04	□□□□□ -1.28
FXR1-204	ENST00000461044	KCNV2	Q8TDN2	545 aa		7.04	□□□□□ -1.28
FXR1-204	ENST00000461044	PCDHGA10	Q9Y5H3	936 aa		7.04	□□□□□ -1.28
FXR1-204	ENST00000461044	SPNS2	Q8IVW8	549 aa		7.03	□□□□□ -1.28
FXR1-204	ENST00000461044	ZNF454	Q8N9F8	522 aa		7.03	□□□□□ -1.28
FXR1-204	ENST00000461044	JPH4	Q96JJ6	628 aa		7.03	□□□□□ -1.28
FXR1-204	ENST00000461044	ADAM33	Q9BZ11	813 aa		7.02	□□□□□ -1.29
FXR1-204	ENST00000461044	SPDYE16	A6NNV3	312 aa	Predicted RBP	7.01	□□□□□ -1.29
FXR1-204	ENST00000461044	PSEN2	P49810	448 aa		7.01	□□□□□ -1.29
FXR1-204	ENST00000461044	PPP4R3B	Q5MIZ7	849 aa		7.01	□□□□□ -1.29
FXR1-204	ENST00000461044	DMRTA1	Q5VZB9	504 aa		7.01	□□□□□ -1.29
FXR1-204	ENST00000461044	ARHGAP33	O14559	1287 aa		7	□□□□□ -1.29
FXR1-204	ENST00000461044	PHF14	O94880	888 aa		7	□□□□□ -1.29
FXR1-204	ENST00000461044	PBX2	P40425	430 aa		7	□□□□□ -1.29
FXR1-204	ENST00000461044	PRIM1	P49642	420 aa	Known RBP	7	□□□□□ -1.29
FXR1-204	ENST00000461044	DDX12P	Q92771	950 aa		7	□□□□□ -1.29
FXR1-204	ENST00000461044	ARHGEF1	Q92888	912 aa	Known RBP	7	□□□□□ -1.29
FXR1-204	ENST00000461044	ZDHHC16	Q969W1	377 aa		7	□□□□□ -1.29
FXR1-204	ENST00000461044	BCL2L12	Q9HB09	334 aa		7	□□□□□ -1.29
FXR1-204	ENST00000461044	LSM11	P83369	360 aa	Known RBP eCLIP	6.99	□□□□□ -1.29
FXR1-204	ENST00000461044	VSIG10	Q8N0Z9	540 aa		6.99	□□□□□ -1.29
FXR1-204	ENST00000461044	TYW1B	Q6NUM6	668 aa		6.97	□□□□□ -1.29
FXR1-204	ENST00000461044	ANKRD13D	Q6ZTN6	518 aa		6.97	□□□□□ -1.29
FXR1-204	ENST00000461044	COL9A1	P20849	921 aa		6.96	□□□□□ -1.3
FXR1-204	ENST00000461044	OSBP	P22059	807 aa		6.96	□□□□□ -1.3
FXR1-204	ENST00000461044	KCNK17	Q96T54	332 aa		6.96	□□□□□ -1.3
FXR1-204	ENST00000461044	EPAS1	Q99814	870 aa		6.96	□□□□□ -1.3
FXR1-204	ENST00000461044	PLSCR2	Q9NRY7	297 aa		6.96	□□□□□ -1.3
FXR1-204	ENST00000461044	MLLT3	P42568	568 aa	Predicted RBP	6.95	□□□□□ -1.3

Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms