RNA–Protein interactions for RNA: ENST00000460940.5

APTX-209, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,874 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-209ENST00000460940 EFCAB2Q5VUJ9 269 aa17.37■□□□□ 0.37
APTX-209ENST00000460940 CCNB3Q8WWL7 1395 aa17.35■□□□□ 0.37
APTX-209ENST00000460940 GPATCH8Q9UKJ3 1502 aaKnown RBP17.35■□□□□ 0.37
APTX-209ENST00000460940 CDC42BPAQ5VT25 1732 aa17.35■□□□□ 0.37
APTX-209ENST00000460940 NCOA2Q15596 1464 aa17.35■□□□□ 0.37
APTX-209ENST00000460940 CDC42BPBQ9Y5S2 1711 aa17.34■□□□□ 0.37
APTX-209ENST00000460940 ADGRL1O94910 1474 aa17.33■□□□□ 0.37
APTX-209ENST00000460940 ITSN2Q9NZM3 1697 aa17.33■□□□□ 0.36
APTX-209ENST00000460940 DENND4BO75064 1496 aaPredicted RBP17.32■□□□□ 0.36
APTX-209ENST00000460940 KANK4Q5T7N3 995 aaPredicted RBP17.31■□□□□ 0.36
APTX-209ENST00000460940 FRMPD1Q5SYB0 1578 aa17.29■□□□□ 0.36
APTX-209ENST00000460940 POGZQ7Z3K3 1410 aa17.29■□□□□ 0.36
APTX-209ENST00000460940 SCAPERQ9BY12 1400 aa17.29■□□□□ 0.36
APTX-209ENST00000460940 ABCC1P33527 1531 aa17.28■□□□□ 0.36
APTX-209ENST00000460940 CFDP1Q9UEE9 299 aaPredicted RBP17.28■□□□□ 0.36
APTX-209ENST00000460940 PLEKHH2Q8IVE3 1493 aa17.28■□□□□ 0.36
APTX-209ENST00000460940 RICTORQ6R327 1708 aa17.27■□□□□ 0.36
APTX-209ENST00000460940 ZMYM4Q5VZL5 1548 aa17.26■□□□□ 0.35
APTX-209ENST00000460940 SAMD9LQ8IVG5 1584 aa17.26■□□□□ 0.35
APTX-209ENST00000460940 ZNF518AQ6AHZ1 1483 aa17.25■□□□□ 0.35
APTX-209ENST00000460940 RAPGEF3O95398 923 aa17.24■□□□□ 0.35
APTX-209ENST00000460940 KIAA1107Q9UPP5 1409 aa17.24■□□□□ 0.35
APTX-209ENST00000460940 MYOM3Q5VTT5 1437 aa17.23■□□□□ 0.35
APTX-209ENST00000460940 MAGI2Q86UL8 1455 aa17.22■□□□□ 0.35
APTX-209ENST00000460940 KDM5CP41229 1560 aa17.22■□□□□ 0.35
APTX-209ENST00000460940 SYCP2Q9BX26 1530 aa17.21■□□□□ 0.35
APTX-209ENST00000460940 MIA2Q96PC5 1412 aa17.21■□□□□ 0.35
APTX-209ENST00000460940 ZNF777Q9ULD5 760 aaPredicted RBP17.21■□□□□ 0.35
APTX-209ENST00000460940 ARHGEF12Q9NZN5 1544 aa17.21■□□□□ 0.35
APTX-209ENST00000460940 ARHGEF40Q8TER5 1519 aa17.2■□□□□ 0.34
APTX-209ENST00000460940 CAMSAP2Q08AD1 1489 aa17.19■□□□□ 0.34
APTX-209ENST00000460940 TRAPPC8Q9Y2L5 1435 aa17.18■□□□□ 0.34
APTX-209ENST00000460940 ZFYVE16Q7Z3T8 1539 aa17.18■□□□□ 0.34
APTX-209ENST00000460940 HECW2Q9P2P5 1572 aa17.17■□□□□ 0.34
APTX-209ENST00000460940 MLH3Q9UHC1 1453 aa17.16■□□□□ 0.34
APTX-209ENST00000460940 MBD5Q9P267 1494 aa17.15■□□□□ 0.34
APTX-209ENST00000460940 AFAP1Q8N556 730 aa17.15■□□□□ 0.34
APTX-209ENST00000460940 ZNF644Q9H582 1327 aaPredicted RBP17.14■□□□□ 0.33
APTX-209ENST00000460940 FGD6Q6ZV73 1430 aa17.14■□□□□ 0.33
APTX-209ENST00000460940 ARHGEF5Q12774 1597 aa17.14■□□□□ 0.33
APTX-209ENST00000460940 HNRNPMP52272 730 aaKnown RBP eCLIP17.13■□□□□ 0.33
APTX-209ENST00000460940 CCDC141Q6ZP82 1450 aa17.13■□□□□ 0.33
APTX-209ENST00000460940 RSPH4AQ5TD94 716 aa17.12■□□□□ 0.33
APTX-209ENST00000460940 YEATS2Q9ULM3 1422 aa17.12■□□□□ 0.33
APTX-209ENST00000460940 TCOF1Q13428 1488 aaKnown RBP17.11■□□□□ 0.33
APTX-209ENST00000460940 PTPN23Q9H3S7 1636 aa17.11■□□□□ 0.33
APTX-209ENST00000460940 SPAG9O60271 1321 aaKnown RBP17.1■□□□□ 0.33
APTX-209ENST00000460940 INO80Q9ULG1 1556 aaPredicted RBP17.1■□□□□ 0.33
APTX-209ENST00000460940 ATP10AO60312 1499 aa17.09■□□□□ 0.33
APTX-209ENST00000460940 DIP2CQ9Y2E4 1556 aa17.09■□□□□ 0.33
APTX-209ENST00000460940 ATP7AQ04656 1500 aa17.08■□□□□ 0.33
APTX-209ENST00000460940 C9orf84Q5VXU9 1444 aa17.08■□□□□ 0.32
APTX-209ENST00000460940 KIDINS220Q9ULH0 1771 aa17.08■□□□□ 0.32
APTX-209ENST00000460940 REREQ9P2R6 1566 aa17.08■□□□□ 0.32
APTX-209ENST00000460940 ABCA6Q8N139 1617 aa17.07■□□□□ 0.32
APTX-209ENST00000460940 RTEL1-TNFRSF6BF6WH68 1400 aa17.07■□□□□ 0.32
APTX-209ENST00000460940 MYT1LQ9UL68 1186 aa17.07■□□□□ 0.32
APTX-209ENST00000460940 MAST1Q9Y2H9 1570 aa17.04■□□□□ 0.32
APTX-209ENST00000460940 SHANK2Q9UPX8 1470 aa17.03■□□□□ 0.32
APTX-209ENST00000460940 TSPY4P0CV99 314 aa17.02■□□□□ 0.32
APTX-209ENST00000460940 TSPY10P0CW01 314 aa17.02■□□□□ 0.32
APTX-209ENST00000460940 PPARGC1BQ86YN6 1023 aaKnown RBP17.02■□□□□ 0.32
APTX-209ENST00000460940 DNMT1P26358 1616 aaKnown RBP17.02■□□□□ 0.32
APTX-209ENST00000460940 CROCC2H7BZ55 1655 aa17.01■□□□□ 0.31
APTX-209ENST00000460940 DAPK1P53355 1430 aa17.01■□□□□ 0.31
APTX-209ENST00000460940 AGLP35573 1532 aa17■□□□□ 0.31
APTX-209ENST00000460940 ABCC5O15440 1437 aa17■□□□□ 0.31
APTX-209ENST00000460940 ADGBQ8N7X0 1667 aa17■□□□□ 0.31
APTX-209ENST00000460940 PLXNC1O60486 1568 aa16.99■□□□□ 0.31
APTX-209ENST00000460940 ARID4BQ4LE39 1312 aaPredicted RBP16.99■□□□□ 0.31
APTX-209ENST00000460940 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.99■□□□□ 0.31
APTX-209ENST00000460940 A2MP01023 1474 aa16.99■□□□□ 0.31
APTX-209ENST00000460940 SIGLEC1Q9BZZ2 1709 aa16.98■□□□□ 0.31
APTX-209ENST00000460940 BCORL1Q5H9F3 1711 aa16.98■□□□□ 0.31
APTX-209ENST00000460940 RRBP1Q9P2E9 1410 aaKnown RBP16.97■□□□□ 0.31
APTX-209ENST00000460940 FAM50AQ14320 339 aaKnown RBP16.97■□□□□ 0.31
APTX-209ENST00000460940 KDM4FA0A1W2PPD8 638 aa16.95■□□□□ 0.3
APTX-209ENST00000460940 ADAMTSL3P82987 1691 aa16.95■□□□□ 0.3
APTX-209ENST00000460940 DHX29Q7Z478 1369 aaKnown RBP16.94■□□□□ 0.3
APTX-209ENST00000460940 PELP1Q8IZL8 1130 aaKnown RBP16.92■□□□□ 0.3
APTX-209ENST00000460940 ADGRL2O95490 1459 aa16.92■□□□□ 0.3
APTX-209ENST00000460940 ANKRD30AQ9BXX3 1397 aa16.9■□□□□ 0.3
APTX-209ENST00000460940 DUOX2Q9NRD8 1548 aa16.9■□□□□ 0.3
APTX-209ENST00000460940 KIF15Q9NS87 1388 aa16.9■□□□□ 0.3
APTX-209ENST00000460940 MADDQ8WXG6 1647 aa16.9■□□□□ 0.3
APTX-209ENST00000460940 EIF2AK4Q9P2K8 1649 aaKnown RBP16.88■□□□□ 0.29
APTX-209ENST00000460940 NCOA1Q15788 1441 aa16.88■□□□□ 0.29
APTX-209ENST00000460940 ERBINQ96RT1 1412 aa16.87■□□□□ 0.29
APTX-209ENST00000460940 FER1L4A9Z1Z3 1794 aa16.87■□□□□ 0.29
APTX-209ENST00000460940 MLECQ14165 292 aa16.87■□□□□ 0.29
APTX-209ENST00000460940 ROCK1Q13464 1354 aa16.87■□□□□ 0.29
APTX-209ENST00000460940 HRCP23327 699 aa16.86■□□□□ 0.29
APTX-209ENST00000460940 AEBP2Q6ZN18 517 aaPredicted RBP16.86■□□□□ 0.29
APTX-209ENST00000460940 PTPRKQ15262 1439 aa16.85■□□□□ 0.29
APTX-209ENST00000460940 FAM135AQ9P2D6 1515 aa16.85■□□□□ 0.29
APTX-209ENST00000460940 CNTLNQ9NXG0 1405 aa16.85■□□□□ 0.29
APTX-209ENST00000460940 CHIC2Q9UKJ5 165 aa16.84■□□□□ 0.29
APTX-209ENST00000460940 RIMS1Q86UR5 1692 aaKnown RBP16.84■□□□□ 0.29
APTX-209ENST00000460940 PTPRMP28827 1452 aa16.84■□□□□ 0.29
APTX-209ENST00000460940 PPP6R1Q9UPN7 881 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms