RNA–Protein interactions for RNA: ENST00000460758.1

SHISA5-211, Transcript of shisa family member 5, humanhuman

TSL 1 (best)

Gene SHISA5, Length 1,297 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA5-211ENST00000460758 CDC42BPAQ5VT25 1732 aa20.71■□□□□ 0.91
SHISA5-211ENST00000460758 ARHGAP5Q13017 1502 aa20.68■□□□□ 0.9
SHISA5-211ENST00000460758 POGZQ7Z3K3 1410 aa20.67■□□□□ 0.9
SHISA5-211ENST00000460758 SIGLEC1Q9BZZ2 1709 aa20.67■□□□□ 0.9
SHISA5-211ENST00000460758 ADAMTSL3P82987 1691 aa20.66■□□□□ 0.9
SHISA5-211ENST00000460758 BCORL1Q5H9F3 1711 aa20.65■□□□□ 0.9
SHISA5-211ENST00000460758 ZFYVE16Q7Z3T8 1539 aa20.64■□□□□ 0.9
SHISA5-211ENST00000460758 SCAPERQ9BY12 1400 aa20.64■□□□□ 0.89
SHISA5-211ENST00000460758 ITSN2Q9NZM3 1697 aa20.63■□□□□ 0.89
SHISA5-211ENST00000460758 ABCC1P33527 1531 aa20.61■□□□□ 0.89
SHISA5-211ENST00000460758 YEATS2Q9ULM3 1422 aa20.61■□□□□ 0.89
SHISA5-211ENST00000460758 KDM5CP41229 1560 aa20.6■□□□□ 0.89
SHISA5-211ENST00000460758 EFCAB2Q5VUJ9 269 aa20.6■□□□□ 0.89
SHISA5-211ENST00000460758 MAGI2Q86UL8 1455 aa20.59■□□□□ 0.89
SHISA5-211ENST00000460758 MADDQ8WXG6 1647 aa20.59■□□□□ 0.89
SHISA5-211ENST00000460758 LOC105371045A0A1W2PR82 267 aa20.58■□□□□ 0.89
SHISA5-211ENST00000460758 ZNF518AQ6AHZ1 1483 aa20.56■□□□□ 0.88
SHISA5-211ENST00000460758 SAMD9LQ8IVG5 1584 aa20.56■□□□□ 0.88
SHISA5-211ENST00000460758 EHBP1L1Q8N3D4 1523 aa20.56■□□□□ 0.88
SHISA5-211ENST00000460758 HECW2Q9P2P5 1572 aa20.55■□□□□ 0.88
SHISA5-211ENST00000460758 ARHGEF12Q9NZN5 1544 aa20.54■□□□□ 0.88
SHISA5-211ENST00000460758 RIMS1Q86UR5 1692 aaKnown RBP20.53■□□□□ 0.88
SHISA5-211ENST00000460758 ABCA6Q8N139 1617 aa20.53■□□□□ 0.88
SHISA5-211ENST00000460758 GPATCH8Q9UKJ3 1502 aaKnown RBP20.53■□□□□ 0.88
SHISA5-211ENST00000460758 TIAM1Q13009 1591 aa20.51■□□□□ 0.87
SHISA5-211ENST00000460758 DIP2CQ9Y2E4 1556 aa20.51■□□□□ 0.87
SHISA5-211ENST00000460758 MTUS2Q5JR59 1369 aa20.5■□□□□ 0.87
SHISA5-211ENST00000460758 PTPRMP28827 1452 aa20.5■□□□□ 0.87
SHISA5-211ENST00000460758 FER1L4A9Z1Z3 1794 aa20.49■□□□□ 0.87
SHISA5-211ENST00000460758 SYCP2Q9BX26 1530 aa20.49■□□□□ 0.87
SHISA5-211ENST00000460758 VPS8Q8N3P4 1428 aa20.49■□□□□ 0.87
SHISA5-211ENST00000460758 TRAPPC8Q9Y2L5 1435 aa20.49■□□□□ 0.87
SHISA5-211ENST00000460758 KIDINS220Q9ULH0 1771 aa20.48■□□□□ 0.87
SHISA5-211ENST00000460758 ATP10AO60312 1499 aa20.48■□□□□ 0.87
SHISA5-211ENST00000460758 ARID4BQ4LE39 1312 aaPredicted RBP20.48■□□□□ 0.87
SHISA5-211ENST00000460758 C9orf84Q5VXU9 1444 aa20.47■□□□□ 0.87
SHISA5-211ENST00000460758 SUPT6HQ7KZ85 1726 aaKnown RBP20.47■□□□□ 0.87
SHISA5-211ENST00000460758 AFAP1Q8N556 730 aa20.46■□□□□ 0.87
SHISA5-211ENST00000460758 REREQ9P2R6 1566 aa20.46■□□□□ 0.87
SHISA5-211ENST00000460758 MLH3Q9UHC1 1453 aa20.45■□□□□ 0.86
SHISA5-211ENST00000460758 CCNB3Q8WWL7 1395 aa20.44■□□□□ 0.86
SHISA5-211ENST00000460758 INO80Q9ULG1 1556 aaPredicted RBP20.41■□□□□ 0.86
SHISA5-211ENST00000460758 NCOA2Q15596 1464 aa20.39■□□□□ 0.85
SHISA5-211ENST00000460758 PLEKHH2Q8IVE3 1493 aa20.39■□□□□ 0.85
SHISA5-211ENST00000460758 ZNF777Q9ULD5 760 aaPredicted RBP20.39■□□□□ 0.85
SHISA5-211ENST00000460758 KIAA1107Q9UPP5 1409 aa20.37■□□□□ 0.85
SHISA5-211ENST00000460758 CFDP1Q9UEE9 299 aaPredicted RBP20.37■□□□□ 0.85
SHISA5-211ENST00000460758 ATP7AQ04656 1500 aa20.36■□□□□ 0.85
SHISA5-211ENST00000460758 MAP3K1Q13233 1512 aa20.36■□□□□ 0.85
SHISA5-211ENST00000460758 LRRC9Q6ZRR7 1453 aa20.36■□□□□ 0.85
SHISA5-211ENST00000460758 AGLP35573 1532 aa20.35■□□□□ 0.85
SHISA5-211ENST00000460758 MLECQ14165 292 aa20.34■□□□□ 0.85
SHISA5-211ENST00000460758 MYT1LQ9UL68 1186 aa20.33■□□□□ 0.85
SHISA5-211ENST00000460758 HNRNPMP52272 730 aaKnown RBP eCLIP20.32■□□□□ 0.84
SHISA5-211ENST00000460758 MBD5Q9P267 1494 aa20.31■□□□□ 0.84
SHISA5-211ENST00000460758 PLXNC1O60486 1568 aa20.31■□□□□ 0.84
SHISA5-211ENST00000460758 CAMSAP2Q08AD1 1489 aa20.3■□□□□ 0.84
SHISA5-211ENST00000460758 ZNF644Q9H582 1327 aaPredicted RBP20.3■□□□□ 0.84
SHISA5-211ENST00000460758 ADGBQ8N7X0 1667 aa20.3■□□□□ 0.84
SHISA5-211ENST00000460758 LMTK3Q96Q04 1460 aa20.29■□□□□ 0.84
SHISA5-211ENST00000460758 SPAG9O60271 1321 aaKnown RBP20.27■□□□□ 0.84
SHISA5-211ENST00000460758 C3P01024 1663 aa20.27■□□□□ 0.84
SHISA5-211ENST00000460758 KANK4Q5T7N3 995 aaPredicted RBP20.25■□□□□ 0.83
SHISA5-211ENST00000460758 PREX1Q8TCU6 1659 aa20.25■□□□□ 0.83
SHISA5-211ENST00000460758 ARHGEF5Q12774 1597 aa20.24■□□□□ 0.83
SHISA5-211ENST00000460758 CCDC141Q6ZP82 1450 aa20.24■□□□□ 0.83
SHISA5-211ENST00000460758 A2MP01023 1474 aa20.23■□□□□ 0.83
SHISA5-211ENST00000460758 PLPPR3Q6T4P5 718 aa20.22■□□□□ 0.83
SHISA5-211ENST00000460758 MROH2AA6NES4 1674 aa20.22■□□□□ 0.83
SHISA5-211ENST00000460758 CLTCQ00610 1675 aaKnown RBP20.19■□□□□ 0.82
SHISA5-211ENST00000460758 RTEL1-TNFRSF6BF6WH68 1400 aa20.19■□□□□ 0.82
SHISA5-211ENST00000460758 MYOM3Q5VTT5 1437 aa20.19■□□□□ 0.82
SHISA5-211ENST00000460758 MAST1Q9Y2H9 1570 aa20.16■□□□□ 0.82
SHISA5-211ENST00000460758 CEBPAP49715 358 aaPredicted RBP20.15■□□□□ 0.82
SHISA5-211ENST00000460758 CROCC2H7BZ55 1655 aa20.15■□□□□ 0.82
SHISA5-211ENST00000460758 SETD1BQ9UPS6 1966 aaKnown RBP20.15■□□□□ 0.82
SHISA5-211ENST00000460758 MIA2Q96PC5 1412 aa20.14■□□□□ 0.81
SHISA5-211ENST00000460758 CNTLNQ9NXG0 1405 aa20.13■□□□□ 0.81
SHISA5-211ENST00000460758 PTPN23Q9H3S7 1636 aa20.12■□□□□ 0.81
SHISA5-211ENST00000460758 HSPA2P54652 639 aa20.09■□□□□ 0.81
SHISA5-211ENST00000460758 RSPH4AQ5TD94 716 aa20.09■□□□□ 0.81
SHISA5-211ENST00000460758 APLP2Q06481 763 aa20.08■□□□□ 0.81
SHISA5-211ENST00000460758 DHX29Q7Z478 1369 aaKnown RBP20.08■□□□□ 0.8
SHISA5-211ENST00000460758 ESF1Q9H501 851 aaKnown RBP20.07■□□□□ 0.8
SHISA5-211ENST00000460758 UHRF1BP1Q6BDS2 1440 aa20.06■□□□□ 0.8
SHISA5-211ENST00000460758 STRCQ7RTU9 1775 aa20.06■□□□□ 0.8
SHISA5-211ENST00000460758 DNMT1P26358 1616 aaKnown RBP20.05■□□□□ 0.8
SHISA5-211ENST00000460758 MYO3AQ8NEV4 1616 aa20.05■□□□□ 0.8
SHISA5-211ENST00000460758 RNF17Q9BXT8 1623 aaKnown RBP20.05■□□□□ 0.8
SHISA5-211ENST00000460758 EIF2AK4Q9P2K8 1649 aaKnown RBP20.05■□□□□ 0.8
SHISA5-211ENST00000460758 FGD6Q6ZV73 1430 aa20.04■□□□□ 0.8
SHISA5-211ENST00000460758 TCOF1Q13428 1488 aaKnown RBP20.04■□□□□ 0.8
SHISA5-211ENST00000460758 GGT6Q6P531 493 aa20.03■□□□□ 0.8
SHISA5-211ENST00000460758 ZNF142P52746 1687 aaPredicted RBP20.03■□□□□ 0.8
SHISA5-211ENST00000460758 NPATQ14207 1427 aa20.02■□□□□ 0.8
SHISA5-211ENST00000460758 FAM135AQ9P2D6 1515 aa20.02■□□□□ 0.8
SHISA5-211ENST00000460758 ZMYM3Q14202 1370 aa20.02■□□□□ 0.8
SHISA5-211ENST00000460758 SHANK2Q9UPX8 1470 aa20.02■□□□□ 0.8
SHISA5-211ENST00000460758 KDM5DQ9BY66 1539 aa20.02■□□□□ 0.79
SHISA5-211ENST00000460758 TSPY4P0CV99 314 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms