RNA–Protein interactions for RNA: ENST00000460758.1

SHISA5-211, Transcript of shisa family member 5, humanhuman

TSL 1 (best)

Gene SHISA5, Length 1,297 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA5-211ENST00000460758 NISCHQ9Y2I1 1504 aa31.74■■■□□ 2.67
SHISA5-211ENST00000460758 CCDC180Q9P1Z9 1646 aa28.43■■■□□ 2.14
SHISA5-211ENST00000460758 ABCC9O60706 1549 aa27.97■■■□□ 2.07
SHISA5-211ENST00000460758 RB1CC1Q8TDY2 1594 aa26.81■■□□□ 1.88
SHISA5-211ENST00000460758 NACADO15069 1562 aa26.7■■□□□ 1.86
SHISA5-211ENST00000460758 MYO15BQ96JP2 1530 aa26.45■■□□□ 1.83
SHISA5-211ENST00000460758 DCAF8L2P0C7V8 631 aa26.45■■□□□ 1.82
SHISA5-211ENST00000460758 ZCCHC6Q5VYS8 1495 aaKnown RBP26.42■■□□□ 1.82
SHISA5-211ENST00000460758 UNC13AQ9UPW8 1703 aa26.38■■□□□ 1.81
SHISA5-211ENST00000460758 DCAF1Q9Y4B6 1507 aa26.25■■□□□ 1.79
SHISA5-211ENST00000460758 BICRAQ9NZM4 1560 aa26.07■■□□□ 1.76
SHISA5-211ENST00000460758 PABPN1Q86U42 306 aaKnown RBP eCLIP26.01■■□□□ 1.75
SHISA5-211ENST00000460758 SCRIBQ14160 1630 aa25.89■■□□□ 1.74
SHISA5-211ENST00000460758 DNAJC5BQ9UF47 199 aa25.85■■□□□ 1.73
SHISA5-211ENST00000460758 SHROOM4Q9ULL8 1493 aa25.7■■□□□ 1.7
SHISA5-211ENST00000460758 EIF4G1Q04637 1599 aaKnown RBP25.37■■□□□ 1.65
SHISA5-211ENST00000460758 CC2D2AQ9P2K1 1620 aa25.34■■□□□ 1.65
SHISA5-211ENST00000460758 CECR2Q9BXF3 1484 aa25.14■■□□□ 1.61
SHISA5-211ENST00000460758 SMARCA4P51532 1647 aa24.74■■□□□ 1.55
SHISA5-211ENST00000460758 BAZ1AQ9NRL2 1556 aaPredicted RBP24.63■■□□□ 1.53
SHISA5-211ENST00000460758 NCAPD3P42695 1498 aa24.6■■□□□ 1.53
SHISA5-211ENST00000460758 ATAD2BQ9ULI0 1458 aa24.6■■□□□ 1.53
SHISA5-211ENST00000460758 SMARCA2P51531 1590 aa24.57■■□□□ 1.52
SHISA5-211ENST00000460758 HMGXB3Q12766 1538 aa24.53■■□□□ 1.52
SHISA5-211ENST00000460758 PEG3Q9GZU2 1588 aa24.49■■□□□ 1.51
SHISA5-211ENST00000460758 MROH2BQ7Z745 1585 aa24.48■■□□□ 1.51
SHISA5-211ENST00000460758 BAZ1BQ9UIG0 1483 aaKnown RBP24.38■■□□□ 1.49
SHISA5-211ENST00000460758 WIZO95785 1651 aa24.24■■□□□ 1.47
SHISA5-211ENST00000460758 NESP48681 1621 aa24.15■■□□□ 1.46
SHISA5-211ENST00000460758 ERCC6Q03468 1493 aa24.08■■□□□ 1.45
SHISA5-211ENST00000460758 LAMC3Q9Y6N6 1575 aa24.06■■□□□ 1.44
SHISA5-211ENST00000460758 RSF1Q96T23 1441 aaPredicted RBP24.05■■□□□ 1.44
SHISA5-211ENST00000460758 KIF21AQ7Z4S6 1674 aa23.96■■□□□ 1.43
SHISA5-211ENST00000460758 CUX2O14529 1486 aa23.95■■□□□ 1.42
SHISA5-211ENST00000460758 TOP2AP11388 1531 aaKnown RBP23.94■■□□□ 1.42
SHISA5-211ENST00000460758 THOC2Q8NI27 1593 aaKnown RBP23.92■■□□□ 1.42
SHISA5-211ENST00000460758 CADPSQ9ULU8 1353 aa23.84■■□□□ 1.41
SHISA5-211ENST00000460758 PDS5BQ9NTI5 1447 aa23.8■■□□□ 1.4
SHISA5-211ENST00000460758 CFTRP13569 1480 aa23.68■■□□□ 1.38
SHISA5-211ENST00000460758 PRDM2Q13029 1718 aa23.68■■□□□ 1.38
SHISA5-211ENST00000460758 MRC2Q9UBG0 1479 aa23.65■■□□□ 1.38
SHISA5-211ENST00000460758 CEP164Q9UPV0 1460 aa23.62■■□□□ 1.37
SHISA5-211ENST00000460758 WDR62O43379 1518 aa23.62■■□□□ 1.37
SHISA5-211ENST00000460758 FANCD2Q9BXW9 1451 aa23.62■■□□□ 1.37
SHISA5-211ENST00000460758 CCDC88BA6NC98 1476 aa23.6■■□□□ 1.37
SHISA5-211ENST00000460758 DNAJC5Q9H3Z4 198 aa23.44■■□□□ 1.34
SHISA5-211ENST00000460758 URB2Q14146 1524 aaKnown RBP23.43■■□□□ 1.34
SHISA5-211ENST00000460758 TOPBP1Q92547 1522 aa23.23■■□□□ 1.31
SHISA5-211ENST00000460758 DNMBPQ6XZF7 1577 aa23.21■■□□□ 1.31
SHISA5-211ENST00000460758 ABCC8Q09428 1581 aa23.16■■□□□ 1.3
SHISA5-211ENST00000460758 SUPT5HO00267 1087 aaKnown RBP23.14■■□□□ 1.29
SHISA5-211ENST00000460758 IFT140Q96RY7 1462 aa23.11■■□□□ 1.29
SHISA5-211ENST00000460758 ZNF608Q9ULD9 1512 aaPredicted RBP23.08■■□□□ 1.28
SHISA5-211ENST00000460758 TARBP1Q13395 1621 aaKnown RBP23.06■■□□□ 1.28
SHISA5-211ENST00000460758 EIF4G3O43432 1585 aaKnown RBP23.04■■□□□ 1.28
SHISA5-211ENST00000460758 POLA1P09884 1462 aaPredicted RBP23.01■■□□□ 1.27
SHISA5-211ENST00000460758 CUX1P39880 1505 aa22.98■■□□□ 1.27
SHISA5-211ENST00000460758 FGD5Q6ZNL6 1462 aa22.93■■□□□ 1.26
SHISA5-211ENST00000460758 RAD54L2Q9Y4B4 1467 aa22.91■■□□□ 1.26
SHISA5-211ENST00000460758 WDR97A6NE52 1622 aa22.88■■□□□ 1.25
SHISA5-211ENST00000460758 AQRO60306 1485 aaKnown RBP eCLIP22.86■■□□□ 1.25
SHISA5-211ENST00000460758 CHD1O14646 1710 aa22.85■■□□□ 1.25
SHISA5-211ENST00000460758 SOGA1O94964 1423 aa22.84■■□□□ 1.25
SHISA5-211ENST00000460758 OSCARQ8IYS5 282 aa22.8■■□□□ 1.24
SHISA5-211ENST00000460758 BIVM-ERCC5R4GMW8 1640 aa22.78■■□□□ 1.24
SHISA5-211ENST00000460758 TDRD9Q8NDG6 1382 aaKnown RBP22.76■■□□□ 1.23
SHISA5-211ENST00000460758 PBRM1Q86U86 1689 aa22.74■■□□□ 1.23
SHISA5-211ENST00000460758 SYNJ1O43426 1573 aa22.73■■□□□ 1.23
SHISA5-211ENST00000460758 TOP2BQ02880 1626 aa22.73■■□□□ 1.23
SHISA5-211ENST00000460758 ABCA5Q8WWZ7 1642 aa22.69■■□□□ 1.22
SHISA5-211ENST00000460758 SNAPC4Q5SXM2 1469 aa22.69■■□□□ 1.22
SHISA5-211ENST00000460758 ABCA10Q8WWZ4 1543 aa22.67■■□□□ 1.22
SHISA5-211ENST00000460758 WRNQ14191 1432 aaPredicted RBP eCLIP22.67■■□□□ 1.22
SHISA5-211ENST00000460758 RIMBP3CA6NJZ7 1639 aa22.65■■□□□ 1.22
SHISA5-211ENST00000460758 RIMBP3BA6NNM3 1639 aa22.65■■□□□ 1.22
SHISA5-211ENST00000460758 RIMBP3Q9UFD9 1639 aa22.65■■□□□ 1.22
SHISA5-211ENST00000460758 GRIN2BQ13224 1484 aa22.64■■□□□ 1.21
SHISA5-211ENST00000460758 MAGI1Q96QZ7 1491 aaPredicted RBP22.63■■□□□ 1.21
SHISA5-211ENST00000460758 GAPVD1Q14C86 1478 aa22.61■■□□□ 1.21
SHISA5-211ENST00000460758 ARHGEF11O15085 1522 aa22.57■■□□□ 1.2
SHISA5-211ENST00000460758 TRIM41Q8WV44 630 aa22.56■■□□□ 1.2
SHISA5-211ENST00000460758 FBLN2P98095 1184 aa22.55■■□□□ 1.2
SHISA5-211ENST00000460758 SYNJ2O15056 1496 aa22.54■■□□□ 1.2
SHISA5-211ENST00000460758 CLASP1Q7Z460 1538 aa22.52■■□□□ 1.2
SHISA5-211ENST00000460758 ADAMTS12P58397 1594 aa22.49■■□□□ 1.19
SHISA5-211ENST00000460758 CHMP7Q8WUX9 453 aaPredicted RBP22.44■■□□□ 1.18
SHISA5-211ENST00000460758 ERICH3Q5RHP9 1530 aa22.41■■□□□ 1.18
SHISA5-211ENST00000460758 GRIN2AQ12879 1464 aa22.39■■□□□ 1.17
SHISA5-211ENST00000460758 ARAP1Q96P48 1450 aa22.38■■□□□ 1.17
SHISA5-211ENST00000460758 CEP170Q5SW79 1584 aa22.34■■□□□ 1.17
SHISA5-211ENST00000460758 FHAD1B1AJZ9 1412 aa22.32■■□□□ 1.16
SHISA5-211ENST00000460758 NUP160Q12769 1436 aa22.29■■□□□ 1.16
SHISA5-211ENST00000460758 CYB5RLQ6IPT4 315 aa22.25■■□□□ 1.15
SHISA5-211ENST00000460758 SHROOM2Q13796 1616 aa22.24■■□□□ 1.15
SHISA5-211ENST00000460758 ERCC6L2Q5T890 1561 aa22.21■■□□□ 1.15
SHISA5-211ENST00000460758 CUL7Q14999 1698 aa22.2■■□□□ 1.15
SHISA5-211ENST00000460758 KIF27Q86VH2 1401 aa22.2■■□□□ 1.14
SHISA5-211ENST00000460758 RUSC2Q8N2Y8 1516 aa22.18■■□□□ 1.14
SHISA5-211ENST00000460758 IGF1RP08069 1367 aa22.12■■□□□ 1.13
SHISA5-211ENST00000460758 PRG4Q92954 1404 aaPredicted RBP22■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms