RNA–Protein interactions for RNA: ENST00000460168.1

HERC4-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,215 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-207ENST00000460168 CDC42BPAQ5VT25 1732 aa15.24■□□□□ 0.03
HERC4-207ENST00000460168 PTPRKQ15262 1439 aa15.24■□□□□ 0.03
HERC4-207ENST00000460168 ZNF777Q9ULD5 760 aaPredicted RBP15.24■□□□□ 0.03
HERC4-207ENST00000460168 ZNF644Q9H582 1327 aaPredicted RBP15.24■□□□□ 0.03
HERC4-207ENST00000460168 CAMSAP2Q08AD1 1489 aa15.22■□□□□ 0.03
HERC4-207ENST00000460168 KCNH8Q96L42 1107 aa15.22■□□□□ 0.03
HERC4-207ENST00000460168 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.2■□□□□ 0.02
HERC4-207ENST00000460168 CHIC2Q9UKJ5 165 aa15.2■□□□□ 0.02
HERC4-207ENST00000460168 DNMT1P26358 1616 aaKnown RBP15.19■□□□□ 0.02
HERC4-207ENST00000460168 TTC37Q6PGP7 1564 aa15.19■□□□□ 0.02
HERC4-207ENST00000460168 HFM1A2PYH4 1435 aa15.19■□□□□ 0.02
HERC4-207ENST00000460168 DAPK1P53355 1430 aa15.19■□□□□ 0.02
HERC4-207ENST00000460168 DHX57Q6P158 1386 aaKnown RBP15.18■□□□□ 0.02
HERC4-207ENST00000460168 PREX2Q70Z35 1606 aa15.18■□□□□ 0.02
HERC4-207ENST00000460168 NPM1P06748 294 aaKnown RBP eCLIP15.17■□□□□ 0.02
HERC4-207ENST00000460168 WDR7Q9Y4E6 1490 aa15.17■□□□□ 0.02
HERC4-207ENST00000460168 CDC42BPBQ9Y5S2 1711 aa15.16■□□□□ 0.02
HERC4-207ENST00000460168 ABCC5O15440 1437 aa15.16■□□□□ 0.02
HERC4-207ENST00000460168 RRP7BPQ9NSQ0 103 aa15.16■□□□□ 0.02
HERC4-207ENST00000460168 NAIPQ13075 1403 aa15.16■□□□□ 0.02
HERC4-207ENST00000460168 MYO5CQ9NQX4 1742 aa15.15■□□□□ 0.02
HERC4-207ENST00000460168 ARHGAP5Q13017 1502 aa15.14■□□□□ 0.01
HERC4-207ENST00000460168 AKNAQ7Z591 1439 aa15.14■□□□□ 0.01
HERC4-207ENST00000460168 ASXL2Q76L83 1435 aa15.13■□□□□ 0.01
HERC4-207ENST00000460168 CLSPNQ9HAW4 1339 aa15.13■□□□□ 0.01
HERC4-207ENST00000460168 GCC2Q8IWJ2 1684 aa15.12■□□□□ 0.01
HERC4-207ENST00000460168 RIMBP3CA6NJZ7 1639 aa15.12■□□□□ 0.01
HERC4-207ENST00000460168 RIMBP3BA6NNM3 1639 aa15.12■□□□□ 0.01
HERC4-207ENST00000460168 RIMBP3Q9UFD9 1639 aa15.12■□□□□ 0.01
HERC4-207ENST00000460168 SAMD9LQ8IVG5 1584 aa15.11■□□□□ 0.01
HERC4-207ENST00000460168 ROCK1Q13464 1354 aa15.11■□□□□ 0.01
HERC4-207ENST00000460168 CROCC2H7BZ55 1655 aa15.11■□□□□ 0.01
HERC4-207ENST00000460168 CYB5RLQ6IPT4 315 aa15.11■□□□□ 0.01
HERC4-207ENST00000460168 PLCH2O75038 1416 aa15.09■□□□□ 0.01
HERC4-207ENST00000460168 HNRNPMP52272 730 aaKnown RBP eCLIP15.09■□□□□ 0.018e-8■■■■■ 31.1
HERC4-207ENST00000460168 ADGBQ8N7X0 1667 aa15.08■□□□□ 0.01
HERC4-207ENST00000460168 UBE2Q2Q8WVN8 375 aa15.08■□□□□ 0
HERC4-207ENST00000460168 ARHGEF5Q12774 1597 aa15.07■□□□□ 0
HERC4-207ENST00000460168 TSPY4P0CV99 314 aa15.07■□□□□ 0
HERC4-207ENST00000460168 TSPY10P0CW01 314 aa15.07■□□□□ 0
HERC4-207ENST00000460168 SYCP2Q9BX26 1530 aa15.07■□□□□ 0
HERC4-207ENST00000460168 EFCAB2Q5VUJ9 269 aa15.07■□□□□ 0
HERC4-207ENST00000460168 SHANK2Q9UPX8 1470 aa15.06■□□□□ 0
HERC4-207ENST00000460168 PLEKHH2Q8IVE3 1493 aa15.06■□□□□ 0
HERC4-207ENST00000460168 MBD5Q9P267 1494 aa15.06■□□□□ 0
HERC4-207ENST00000460168 ABCA9Q8IUA7 1624 aa15.06■□□□□ 0
HERC4-207ENST00000460168 PLEKHG5O94827 1062 aa15.05■□□□□ 0
HERC4-207ENST00000460168 ANP32EQ9BTT0 268 aa15.05■□□□□ 0
HERC4-207ENST00000460168 ANKRD30AQ9BXX3 1397 aa15.05■□□□□ 0
HERC4-207ENST00000460168 NCOA1Q15788 1441 aa15.05■□□□□ 0
HERC4-207ENST00000460168 C9orf84Q5VXU9 1444 aa15.05■□□□□ 0
HERC4-207ENST00000460168 CCDC141Q6ZP82 1450 aa15.05■□□□□ 0
HERC4-207ENST00000460168 ADGRL2O95490 1459 aa15.05■□□□□ -0
HERC4-207ENST00000460168 RSPH4AQ5TD94 716 aa15.05■□□□□ -0
HERC4-207ENST00000460168 NCBP3Q53F19 620 aaKnown RBP15.04■□□□□ -0
HERC4-207ENST00000460168 MAPKBP1O60336 1514 aa15.04■□□□□ -0
HERC4-207ENST00000460168 ARAP3Q8WWN8 1544 aa15.04■□□□□ -0
HERC4-207ENST00000460168 KDM6BO15054 1643 aa15.04■□□□□ -0
HERC4-207ENST00000460168 KIAA1107Q9UPP5 1409 aa15.03■□□□□ -0
HERC4-207ENST00000460168 TRIM52Q96A61 297 aa15.02□□□□□ -0.01
HERC4-207ENST00000460168 FANCAO15360 1455 aa15□□□□□ -0.01
HERC4-207ENST00000460168 ABCC1P33527 1531 aa15□□□□□ -0.01
HERC4-207ENST00000460168 ACIN1Q9UKV3 1341 aaKnown RBP15□□□□□ -0.01
HERC4-207ENST00000460168 ARHGEF12Q9NZN5 1544 aa14.98□□□□□ -0.01
HERC4-207ENST00000460168 KIF15Q9NS87 1388 aa14.97□□□□□ -0.01
HERC4-207ENST00000460168 ANKRD50Q9ULJ7 1429 aa14.97□□□□□ -0.01
HERC4-207ENST00000460168 CD109Q6YHK3 1445 aa14.96□□□□□ -0.01
HERC4-207ENST00000460168 MAST1Q9Y2H9 1570 aa14.96□□□□□ -0.02
HERC4-207ENST00000460168 TRAPPC8Q9Y2L5 1435 aa14.94□□□□□ -0.02
HERC4-207ENST00000460168 ADGRL1O94910 1474 aa14.94□□□□□ -0.02
HERC4-207ENST00000460168 NEUROD1Q13562 356 aa14.93□□□□□ -0.02
HERC4-207ENST00000460168 SIN3AQ96ST3 1273 aa14.93□□□□□ -0.02
HERC4-207ENST00000460168 MPHOSPH9Q99550 1183 aa14.92□□□□□ -0.02
HERC4-207ENST00000460168 PLXNC1O60486 1568 aa14.91□□□□□ -0.02
HERC4-207ENST00000460168 CFAP74Q9C0B2 1584 aa14.91□□□□□ -0.02
HERC4-207ENST00000460168 AFAP1Q8N556 730 aa14.91□□□□□ -0.02
HERC4-207ENST00000460168 SCAPERQ9BY12 1400 aa14.91□□□□□ -0.02
HERC4-207ENST00000460168 SLC4A1APQ9BWU0 796 aaKnown RBP14.9□□□□□ -0.02
HERC4-207ENST00000460168 SPAG9O60271 1321 aaKnown RBP14.9□□□□□ -0.02
HERC4-207ENST00000460168 DENND4BO75064 1496 aaPredicted RBP14.89□□□□□ -0.03
HERC4-207ENST00000460168 ZFYVE16Q7Z3T8 1539 aa14.87□□□□□ -0.03
HERC4-207ENST00000460168 PHF23Q9BUL5 403 aaPredicted RBP14.87□□□□□ -0.03
HERC4-207ENST00000460168 MYT1LQ9UL68 1186 aa14.87□□□□□ -0.03
HERC4-207ENST00000460168 DUOX2Q9NRD8 1548 aa14.87□□□□□ -0.03
HERC4-207ENST00000460168 MAP3K4Q9Y6R4 1608 aa14.86□□□□□ -0.03
HERC4-207ENST00000460168 RTEL1-TNFRSF6BF6WH68 1400 aa14.86□□□□□ -0.03
HERC4-207ENST00000460168 NUP155O75694 1391 aa14.86□□□□□ -0.03
HERC4-207ENST00000460168 PZPP20742 1482 aa14.86□□□□□ -0.03
HERC4-207ENST00000460168 FOXD1Q16676 465 aa14.86□□□□□ -0.03
HERC4-207ENST00000460168 GLI2P10070 1586 aa14.86□□□□□ -0.03
HERC4-207ENST00000460168 FAM69CQ0P6D2 419 aa14.85□□□□□ -0.03
HERC4-207ENST00000460168 PODXL2Q9NZ53 605 aa14.85□□□□□ -0.03
HERC4-207ENST00000460168 ZNF518AQ6AHZ1 1483 aa14.85□□□□□ -0.03
HERC4-207ENST00000460168 DIP2BQ9P265 1576 aa14.85□□□□□ -0.03
HERC4-207ENST00000460168 ATP7AQ04656 1500 aa14.85□□□□□ -0.03
HERC4-207ENST00000460168 TIMELESSQ9UNS1 1208 aa14.84□□□□□ -0.03
HERC4-207ENST00000460168 NEO1Q92859 1461 aa14.84□□□□□ -0.03
HERC4-207ENST00000460168 ERBINQ96RT1 1412 aa14.84□□□□□ -0.03
HERC4-207ENST00000460168 TONSLQ96HA7 1378 aa14.84□□□□□ -0.03
HERC4-207ENST00000460168 INO80Q9ULG1 1556 aaPredicted RBP14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 152.7 ms