RNA–Protein interactions for RNA: ENST00000460062.6

CSNK2A1-205, Transcript of casein kinase 2 alpha 1, humanhuman

TSL 4

Gene CSNK2A1, Length 552 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2A1-205ENST00000460062 APLP2Q06481 763 aa23.57■■□□□ 1.36
CSNK2A1-205ENST00000460062 FANCAO15360 1455 aa23.56■■□□□ 1.36
CSNK2A1-205ENST00000460062 PREX2Q70Z35 1606 aa23.56■■□□□ 1.36
CSNK2A1-205ENST00000460062 CDC42BPAQ5VT25 1732 aa23.56■■□□□ 1.36
CSNK2A1-205ENST00000460062 SUPT6HQ7KZ85 1726 aaKnown RBP23.56■■□□□ 1.36
CSNK2A1-205ENST00000460062 CDC42BPBQ9Y5S2 1711 aa23.54■■□□□ 1.36
CSNK2A1-205ENST00000460062 COL17A1Q9UMD9 1497 aaPredicted RBP23.52■■□□□ 1.36
CSNK2A1-205ENST00000460062 ARHGAP5Q13017 1502 aa23.51■■□□□ 1.35
CSNK2A1-205ENST00000460062 GPATCH8Q9UKJ3 1502 aaKnown RBP23.51■■□□□ 1.35
CSNK2A1-205ENST00000460062 EFCAB2Q5VUJ9 269 aa23.51■■□□□ 1.35
CSNK2A1-205ENST00000460062 AKNAQ7Z591 1439 aa23.5■■□□□ 1.35
CSNK2A1-205ENST00000460062 KANK4Q5T7N3 995 aaPredicted RBP23.5■■□□□ 1.35
CSNK2A1-205ENST00000460062 NCOA2Q15596 1464 aa23.49■■□□□ 1.35
CSNK2A1-205ENST00000460062 CCNB3Q8WWL7 1395 aa23.49■■□□□ 1.35
CSNK2A1-205ENST00000460062 ITSN2Q9NZM3 1697 aa23.48■■□□□ 1.35
CSNK2A1-205ENST00000460062 ADGRL1O94910 1474 aa23.43■■□□□ 1.34
CSNK2A1-205ENST00000460062 DENND4BO75064 1496 aaPredicted RBP23.42■■□□□ 1.34
CSNK2A1-205ENST00000460062 RICTORQ6R327 1708 aa23.41■■□□□ 1.34
CSNK2A1-205ENST00000460062 CFDP1Q9UEE9 299 aaPredicted RBP23.4■■□□□ 1.34
CSNK2A1-205ENST00000460062 SCAPERQ9BY12 1400 aa23.39■■□□□ 1.33
CSNK2A1-205ENST00000460062 FRMPD1Q5SYB0 1578 aa23.39■■□□□ 1.33
CSNK2A1-205ENST00000460062 ABCC1P33527 1531 aa23.38■■□□□ 1.33
CSNK2A1-205ENST00000460062 SAMD9LQ8IVG5 1584 aa23.38■■□□□ 1.33
CSNK2A1-205ENST00000460062 PLEKHH2Q8IVE3 1493 aa23.36■■□□□ 1.33
CSNK2A1-205ENST00000460062 POGZQ7Z3K3 1410 aa23.35■■□□□ 1.33
CSNK2A1-205ENST00000460062 RAPGEF3O95398 923 aa23.35■■□□□ 1.33
CSNK2A1-205ENST00000460062 KIAA1107Q9UPP5 1409 aa23.34■■□□□ 1.33
CSNK2A1-205ENST00000460062 MYOM3Q5VTT5 1437 aa23.33■■□□□ 1.33
CSNK2A1-205ENST00000460062 ZMYM4Q5VZL5 1548 aa23.33■■□□□ 1.33
CSNK2A1-205ENST00000460062 ZNF518AQ6AHZ1 1483 aa23.32■■□□□ 1.32
CSNK2A1-205ENST00000460062 ARHGEF12Q9NZN5 1544 aa23.32■■□□□ 1.32
CSNK2A1-205ENST00000460062 MIA2Q96PC5 1412 aa23.32■■□□□ 1.32
CSNK2A1-205ENST00000460062 ZNF777Q9ULD5 760 aaPredicted RBP23.31■■□□□ 1.32
CSNK2A1-205ENST00000460062 KDM5CP41229 1560 aa23.3■■□□□ 1.32
CSNK2A1-205ENST00000460062 SYCP2Q9BX26 1530 aa23.29■■□□□ 1.32
CSNK2A1-205ENST00000460062 MAGI2Q86UL8 1455 aa23.28■■□□□ 1.32
CSNK2A1-205ENST00000460062 TRAPPC8Q9Y2L5 1435 aa23.26■■□□□ 1.31
CSNK2A1-205ENST00000460062 CAMSAP2Q08AD1 1489 aa23.26■■□□□ 1.31
CSNK2A1-205ENST00000460062 ZNF644Q9H582 1327 aaPredicted RBP23.26■■□□□ 1.31
CSNK2A1-205ENST00000460062 PIAS4Q8N2W9 510 aaPredicted RBP23.25■■□□□ 1.31
CSNK2A1-205ENST00000460062 AFAP1Q8N556 730 aa23.24■■□□□ 1.31
CSNK2A1-205ENST00000460062 MBD5Q9P267 1494 aa23.24■■□□□ 1.31
CSNK2A1-205ENST00000460062 ARHGEF40Q8TER5 1519 aa23.23■■□□□ 1.31
CSNK2A1-205ENST00000460062 HNRNPMP52272 730 aaKnown RBP eCLIP23.22■■□□□ 1.312e-7■■□□□ 14.5
CSNK2A1-205ENST00000460062 FGD6Q6ZV73 1430 aa23.22■■□□□ 1.31
CSNK2A1-205ENST00000460062 MLH3Q9UHC1 1453 aa23.22■■□□□ 1.31
CSNK2A1-205ENST00000460062 HECW2Q9P2P5 1572 aa23.22■■□□□ 1.31
CSNK2A1-205ENST00000460062 ZFYVE16Q7Z3T8 1539 aa23.21■■□□□ 1.31
CSNK2A1-205ENST00000460062 PTPN23Q9H3S7 1636 aa23.2■■□□□ 1.3
CSNK2A1-205ENST00000460062 ARHGEF5Q12774 1597 aa23.2■■□□□ 1.3
CSNK2A1-205ENST00000460062 RSPH4AQ5TD94 716 aa23.19■■□□□ 1.3
CSNK2A1-205ENST00000460062 TCOF1Q13428 1488 aaKnown RBP23.17■■□□□ 1.3
CSNK2A1-205ENST00000460062 CCDC141Q6ZP82 1450 aa23.17■■□□□ 1.3
CSNK2A1-205ENST00000460062 YEATS2Q9ULM3 1422 aa23.16■■□□□ 1.3
CSNK2A1-205ENST00000460062 KIDINS220Q9ULH0 1771 aa23.16■■□□□ 1.3
CSNK2A1-205ENST00000460062 INO80Q9ULG1 1556 aaPredicted RBP23.14■■□□□ 1.3
CSNK2A1-205ENST00000460062 SPAG9O60271 1321 aaKnown RBP23.14■■□□□ 1.3
CSNK2A1-205ENST00000460062 PPARGC1BQ86YN6 1023 aaKnown RBP23.14■■□□□ 1.29
CSNK2A1-205ENST00000460062 ATP7AQ04656 1500 aa23.12■■□□□ 1.29
CSNK2A1-205ENST00000460062 ABCA6Q8N139 1617 aa23.11■■□□□ 1.29
CSNK2A1-205ENST00000460062 ATP10AO60312 1499 aa23.11■■□□□ 1.29
CSNK2A1-205ENST00000460062 DIP2CQ9Y2E4 1556 aa23.11■■□□□ 1.29
CSNK2A1-205ENST00000460062 RTEL1-TNFRSF6BF6WH68 1400 aa23.11■■□□□ 1.29
CSNK2A1-205ENST00000460062 REREQ9P2R6 1566 aa23.1■■□□□ 1.29
CSNK2A1-205ENST00000460062 C9orf84Q5VXU9 1444 aa23.08■■□□□ 1.29
CSNK2A1-205ENST00000460062 MYT1LQ9UL68 1186 aa23.08■■□□□ 1.29
CSNK2A1-205ENST00000460062 MAST1Q9Y2H9 1570 aa23.08■■□□□ 1.29
CSNK2A1-205ENST00000460062 DNMT1P26358 1616 aaKnown RBP23.08■■□□□ 1.28
CSNK2A1-205ENST00000460062 CROCC2H7BZ55 1655 aa23.06■■□□□ 1.28
CSNK2A1-205ENST00000460062 TSPY4P0CV99 314 aa23.05■■□□□ 1.28
CSNK2A1-205ENST00000460062 TSPY10P0CW01 314 aa23.05■■□□□ 1.28
CSNK2A1-205ENST00000460062 SHANK2Q9UPX8 1470 aa23.05■■□□□ 1.28
CSNK2A1-205ENST00000460062 MSH5O43196 834 aa23.04■■□□□ 1.28
CSNK2A1-205ENST00000460062 ABCC5O15440 1437 aa23.04■■□□□ 1.28
CSNK2A1-205ENST00000460062 ADGBQ8N7X0 1667 aa23.03■■□□□ 1.28
CSNK2A1-205ENST00000460062 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.03■■□□□ 1.28
CSNK2A1-205ENST00000460062 SIGLEC1Q9BZZ2 1709 aa23.03■■□□□ 1.28
CSNK2A1-205ENST00000460062 DAPK1P53355 1430 aa23.03■■□□□ 1.28
CSNK2A1-205ENST00000460062 RRBP1Q9P2E9 1410 aaKnown RBP23.01■■□□□ 1.27
CSNK2A1-205ENST00000460062 FAM50AQ14320 339 aaKnown RBP23.01■■□□□ 1.27
CSNK2A1-205ENST00000460062 AGLP35573 1532 aa23■■□□□ 1.27
CSNK2A1-205ENST00000460062 PLXNC1O60486 1568 aa22.99■■□□□ 1.27
CSNK2A1-205ENST00000460062 BCORL1Q5H9F3 1711 aa22.99■■□□□ 1.27
CSNK2A1-205ENST00000460062 A2MP01023 1474 aa22.98■■□□□ 1.27
CSNK2A1-205ENST00000460062 ARID4BQ4LE39 1312 aaPredicted RBP22.97■■□□□ 1.27
CSNK2A1-205ENST00000460062 ADAMTSL3P82987 1691 aa22.95■■□□□ 1.26
CSNK2A1-205ENST00000460062 KDM4FA0A1W2PPD8 638 aa22.94■■□□□ 1.26
CSNK2A1-205ENST00000460062 DHX29Q7Z478 1369 aaKnown RBP22.93■■□□□ 1.26
CSNK2A1-205ENST00000460062 ADGRL2O95490 1459 aa22.92■■□□□ 1.26
CSNK2A1-205ENST00000460062 ANKRD30AQ9BXX3 1397 aa22.89■■□□□ 1.26
CSNK2A1-205ENST00000460062 DUOX2Q9NRD8 1548 aa22.88■■□□□ 1.25
CSNK2A1-205ENST00000460062 NCOA1Q15788 1441 aa22.88■■□□□ 1.25
CSNK2A1-205ENST00000460062 PTPRKQ15262 1439 aa22.87■■□□□ 1.25
CSNK2A1-205ENST00000460062 KIF15Q9NS87 1388 aa22.87■■□□□ 1.25
CSNK2A1-205ENST00000460062 MADDQ8WXG6 1647 aa22.86■■□□□ 1.25
CSNK2A1-205ENST00000460062 EIF2AK4Q9P2K8 1649 aaKnown RBP22.86■■□□□ 1.25
CSNK2A1-205ENST00000460062 CHIC2Q9UKJ5 165 aa22.85■■□□□ 1.25
CSNK2A1-205ENST00000460062 ROCK1Q13464 1354 aa22.85■■□□□ 1.25
CSNK2A1-205ENST00000460062 FER1L4A9Z1Z3 1794 aa22.84■■□□□ 1.25
CSNK2A1-205ENST00000460062 MLECQ14165 292 aa22.82■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms