RNA–Protein interactions for RNA: ENST00000459788.1

HDLBP-228, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-228ENST00000459788 BCORL1Q5H9F3 1711 aa16.2■□□□□ 0.18
HDLBP-228ENST00000459788 CDC42BPBQ9Y5S2 1711 aa16.2■□□□□ 0.18
HDLBP-228ENST00000459788 POGZQ7Z3K3 1410 aa16.19■□□□□ 0.18
HDLBP-228ENST00000459788 PREX2Q70Z35 1606 aa16.19■□□□□ 0.18
HDLBP-228ENST00000459788 ZFYVE16Q7Z3T8 1539 aa16.18■□□□□ 0.18
HDLBP-228ENST00000459788 SCAPERQ9BY12 1400 aa16.18■□□□□ 0.18
HDLBP-228ENST00000459788 ARHGAP5Q13017 1502 aa16.17■□□□□ 0.18
HDLBP-228ENST00000459788 CDC42BPAQ5VT25 1732 aa16.16■□□□□ 0.18
HDLBP-228ENST00000459788 ZNF518AQ6AHZ1 1483 aa16.16■□□□□ 0.18
HDLBP-228ENST00000459788 KDM5CP41229 1560 aa16.15■□□□□ 0.18
HDLBP-228ENST00000459788 ITSN2Q9NZM3 1697 aa16.11■□□□□ 0.17
HDLBP-228ENST00000459788 CEP162Q5TB80 1403 aa16.11■□□□□ 0.17
HDLBP-228ENST00000459788 ATP10AO60312 1499 aa16.1■□□□□ 0.17
HDLBP-228ENST00000459788 ABCC1P33527 1531 aa16.1■□□□□ 0.17
HDLBP-228ENST00000459788 HECW2Q9P2P5 1572 aa16.1■□□□□ 0.17
HDLBP-228ENST00000459788 REREQ9P2R6 1566 aa16.1■□□□□ 0.17
HDLBP-228ENST00000459788 PTPRMP28827 1452 aa16.1■□□□□ 0.17
HDLBP-228ENST00000459788 MADDQ8WXG6 1647 aa16.09■□□□□ 0.17
HDLBP-228ENST00000459788 YEATS2Q9ULM3 1422 aa16.09■□□□□ 0.17
HDLBP-228ENST00000459788 MLH3Q9UHC1 1453 aa16.09■□□□□ 0.17
HDLBP-228ENST00000459788 C9orf84Q5VXU9 1444 aa16.08■□□□□ 0.16
HDLBP-228ENST00000459788 ARID4BQ4LE39 1312 aaPredicted RBP16.07■□□□□ 0.16
HDLBP-228ENST00000459788 EHBP1L1Q8N3D4 1523 aa16.06■□□□□ 0.16
HDLBP-228ENST00000459788 FER1L4A9Z1Z3 1794 aa16.05■□□□□ 0.16
HDLBP-228ENST00000459788 SIGLEC1Q9BZZ2 1709 aa16.05■□□□□ 0.16
HDLBP-228ENST00000459788 GPATCH8Q9UKJ3 1502 aaKnown RBP16.05■□□□□ 0.16
HDLBP-228ENST00000459788 PLEKHH2Q8IVE3 1493 aa16.05■□□□□ 0.16
HDLBP-228ENST00000459788 RIMS1Q86UR5 1692 aaKnown RBP16.05■□□□□ 0.16
HDLBP-228ENST00000459788 MTUS2Q5JR59 1369 aa16.04■□□□□ 0.16
HDLBP-228ENST00000459788 KIAA1107Q9UPP5 1409 aa16.03■□□□□ 0.16
HDLBP-228ENST00000459788 DIP2CQ9Y2E4 1556 aa16.03■□□□□ 0.16
HDLBP-228ENST00000459788 SAMD9LQ8IVG5 1584 aa16.02■□□□□ 0.16
HDLBP-228ENST00000459788 ARHGEF12Q9NZN5 1544 aa16.02■□□□□ 0.15
HDLBP-228ENST00000459788 KIDINS220Q9ULH0 1771 aa16.02■□□□□ 0.15
HDLBP-228ENST00000459788 AGLP35573 1532 aa16.01■□□□□ 0.15
HDLBP-228ENST00000459788 ABCA6Q8N139 1617 aa16.01■□□□□ 0.15
HDLBP-228ENST00000459788 CCNB3Q8WWL7 1395 aa16■□□□□ 0.15
HDLBP-228ENST00000459788 SETD1BQ9UPS6 1966 aaKnown RBP16■□□□□ 0.15
HDLBP-228ENST00000459788 AFAP1Q8N556 730 aa16■□□□□ 0.15
HDLBP-228ENST00000459788 SUPT6HQ7KZ85 1726 aaKnown RBP15.99■□□□□ 0.15
HDLBP-228ENST00000459788 TRAPPC8Q9Y2L5 1435 aa15.99■□□□□ 0.15
HDLBP-228ENST00000459788 TIAM1Q13009 1591 aa15.98■□□□□ 0.15
HDLBP-228ENST00000459788 MAP3K1Q13233 1512 aa15.98■□□□□ 0.15
HDLBP-228ENST00000459788 VPS8Q8N3P4 1428 aa15.97■□□□□ 0.15
HDLBP-228ENST00000459788 SYCP2Q9BX26 1530 aa15.97■□□□□ 0.15
HDLBP-228ENST00000459788 CFDP1Q9UEE9 299 aaPredicted RBP15.96■□□□□ 0.15
HDLBP-228ENST00000459788 INO80Q9ULG1 1556 aaPredicted RBP15.94■□□□□ 0.14
HDLBP-228ENST00000459788 ATP7AQ04656 1500 aa15.93■□□□□ 0.14
HDLBP-228ENST00000459788 ADGBQ8N7X0 1667 aa15.92■□□□□ 0.14
HDLBP-228ENST00000459788 MYT1LQ9UL68 1186 aa15.92■□□□□ 0.14
HDLBP-228ENST00000459788 LMTK3Q96Q04 1460 aa15.91■□□□□ 0.14
HDLBP-228ENST00000459788 ZNF777Q9ULD5 760 aaPredicted RBP15.91■□□□□ 0.14
HDLBP-228ENST00000459788 PREX1Q8TCU6 1659 aa15.91■□□□□ 0.14
HDLBP-228ENST00000459788 SPAG9O60271 1321 aaKnown RBP15.91■□□□□ 0.14
HDLBP-228ENST00000459788 NCOA2Q15596 1464 aa15.91■□□□□ 0.14
HDLBP-228ENST00000459788 MROH2AA6NES4 1674 aa15.9■□□□□ 0.14
HDLBP-228ENST00000459788 RSPH4AQ5TD94 716 aa15.9■□□□□ 0.14
HDLBP-228ENST00000459788 RTEL1-TNFRSF6BF6WH68 1400 aa15.9■□□□□ 0.14
HDLBP-228ENST00000459788 CNTLNQ9NXG0 1405 aa15.9■□□□□ 0.14
HDLBP-228ENST00000459788 PLXNC1O60486 1568 aa15.89■□□□□ 0.13
HDLBP-228ENST00000459788 LOC105371045A0A1W2PR82 267 aa15.89■□□□□ 0.13
HDLBP-228ENST00000459788 LRRC9Q6ZRR7 1453 aa15.89■□□□□ 0.13
HDLBP-228ENST00000459788 MBD5Q9P267 1494 aa15.89■□□□□ 0.13
HDLBP-228ENST00000459788 MLECQ14165 292 aa15.88■□□□□ 0.13
HDLBP-228ENST00000459788 HNRNPMP52272 730 aaKnown RBP eCLIP15.87■□□□□ 0.134e-8■■■■■ 33.4
HDLBP-228ENST00000459788 C3P01024 1663 aa15.86■□□□□ 0.13
HDLBP-228ENST00000459788 ARHGEF5Q12774 1597 aa15.86■□□□□ 0.13
HDLBP-228ENST00000459788 PPP6R1Q9UPN7 881 aa15.85■□□□□ 0.13
HDLBP-228ENST00000459788 A2MP01023 1474 aa15.84■□□□□ 0.13
HDLBP-228ENST00000459788 CAMSAP2Q08AD1 1489 aa15.84■□□□□ 0.13
HDLBP-228ENST00000459788 CCDC141Q6ZP82 1450 aa15.84■□□□□ 0.13
HDLBP-228ENST00000459788 ESF1Q9H501 851 aaKnown RBP15.83■□□□□ 0.12
HDLBP-228ENST00000459788 FAM135AQ9P2D6 1515 aa15.83■□□□□ 0.12
HDLBP-228ENST00000459788 MIA2Q96PC5 1412 aa15.81■□□□□ 0.12
HDLBP-228ENST00000459788 NPATQ14207 1427 aa15.79■□□□□ 0.12
HDLBP-228ENST00000459788 UHRF1BP1Q6BDS2 1440 aa15.79■□□□□ 0.12
HDLBP-228ENST00000459788 ZNF644Q9H582 1327 aaPredicted RBP15.79■□□□□ 0.12
HDLBP-228ENST00000459788 MAST1Q9Y2H9 1570 aa15.79■□□□□ 0.12
HDLBP-228ENST00000459788 MYOM3Q5VTT5 1437 aa15.77■□□□□ 0.12
HDLBP-228ENST00000459788 DHX29Q7Z478 1369 aaKnown RBP15.77■□□□□ 0.12
HDLBP-228ENST00000459788 CLTCQ00610 1675 aaKnown RBP15.76■□□□□ 0.11
HDLBP-228ENST00000459788 APLP2Q06481 763 aa15.75■□□□□ 0.11
HDLBP-228ENST00000459788 TSPY4P0CV99 314 aa15.74■□□□□ 0.11
HDLBP-228ENST00000459788 TSPY10P0CW01 314 aa15.74■□□□□ 0.11
HDLBP-228ENST00000459788 CEBPAP49715 358 aaPredicted RBP15.74■□□□□ 0.11
HDLBP-228ENST00000459788 ZMYM3Q14202 1370 aa15.74■□□□□ 0.11
HDLBP-228ENST00000459788 STRCQ7RTU9 1775 aa15.72■□□□□ 0.11
HDLBP-228ENST00000459788 EIF2AK4Q9P2K8 1649 aaKnown RBP15.72■□□□□ 0.11
HDLBP-228ENST00000459788 KANK4Q5T7N3 995 aaPredicted RBP15.72■□□□□ 0.11
HDLBP-228ENST00000459788 DMRT2Q9Y5R5 561 aa15.72■□□□□ 0.11
HDLBP-228ENST00000459788 ZNF142P52746 1687 aaPredicted RBP15.72■□□□□ 0.11
HDLBP-228ENST00000459788 HSPA2P54652 639 aa15.71■□□□□ 0.11
HDLBP-228ENST00000459788 PLPPR3Q6T4P5 718 aa15.71■□□□□ 0.11
HDLBP-228ENST00000459788 CROCC2H7BZ55 1655 aa15.7■□□□□ 0.1
HDLBP-228ENST00000459788 RNF17Q9BXT8 1623 aaKnown RBP15.69■□□□□ 0.1
HDLBP-228ENST00000459788 SHANK2Q9UPX8 1470 aa15.69■□□□□ 0.1
HDLBP-228ENST00000459788 KDM5DQ9BY66 1539 aa15.68■□□□□ 0.1
HDLBP-228ENST00000459788 ZC3H13Q5T200 1668 aaKnown RBP15.68■□□□□ 0.1
HDLBP-228ENST00000459788 PTPN23Q9H3S7 1636 aa15.68■□□□□ 0.1
HDLBP-228ENST00000459788 PTPRKQ15262 1439 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms