RNA–Protein interactions for RNA: ENST00000459004.1

SCARNA18-201, small Cajal body-specific RNA 18, humanhuman

BASIC

Gene SCARNA18, Length 134 nt, Biotype snoRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA18-201ENST00000459004 CADPS2Q86UW7 1296 aa7.82□□□□□ -1.16
SCARNA18-201ENST00000459004 OTUD5Q96G74 571 aa7.81□□□□□ -1.16
SCARNA18-201ENST00000459004 TMEM92Q6UXU6 159 aa7.8□□□□□ -1.16
SCARNA18-201ENST00000459004 TMC2Q8TDI7 906 aa7.8□□□□□ -1.16
SCARNA18-201ENST00000459004 CRISPLD2Q9H0B8 497 aa7.8□□□□□ -1.16
SCARNA18-201ENST00000459004 GPHNQ9NQX3 736 aaPredicted RBP7.8□□□□□ -1.16
SCARNA18-201ENST00000459004 KIF3CO14782 793 aa7.79□□□□□ -1.16
SCARNA18-201ENST00000459004 SLAIN1Q8ND83 568 aa7.79□□□□□ -1.16
SCARNA18-201ENST00000459004 NCKAP5LQ9HCH0 1330 aa7.78□□□□□ -1.16
SCARNA18-201ENST00000459004 C2orf72A6NCS6 295 aa7.78□□□□□ -1.16
SCARNA18-201ENST00000459004 VSIG10Q8N0Z9 540 aa7.77□□□□□ -1.17
SCARNA18-201ENST00000459004 LARP6Q9BRS8 491 aaKnown RBP7.76□□□□□ -1.17
SCARNA18-201ENST00000459004 FOXK1P85037 733 aa7.75□□□□□ -1.17
SCARNA18-201ENST00000459004 MFSD10Q14728 455 aa7.75□□□□□ -1.17
SCARNA18-201ENST00000459004 WDR70Q9NW82 654 aa7.75□□□□□ -1.17
SCARNA18-201ENST00000459004 SLC24A1O60721 1099 aa7.74□□□□□ -1.17
SCARNA18-201ENST00000459004 DDX27Q96GQ7 796 aaKnown RBP7.74□□□□□ -1.17
SCARNA18-201ENST00000459004 DSG2Q14126 1118 aa7.73□□□□□ -1.17
SCARNA18-201ENST00000459004 PPP1R15BQ5SWA1 713 aa7.73□□□□□ -1.17
SCARNA18-201ENST00000459004 PLPP6Q8IY26 295 aa7.72□□□□□ -1.17
SCARNA18-201ENST00000459004 KDM2AQ9Y2K7 1162 aa7.71□□□□□ -1.18
SCARNA18-201ENST00000459004 SNPHO15079 494 aa7.7□□□□□ -1.18
SCARNA18-201ENST00000459004 DOK7Q18PE1 504 aa7.67□□□□□ -1.18
SCARNA18-201ENST00000459004 CAMK2BQ13554 666 aa7.66□□□□□ -1.18
SCARNA18-201ENST00000459004 E2F4Q16254 413 aa7.66□□□□□ -1.18
SCARNA18-201ENST00000459004 SLC34A2O95436 690 aa7.65□□□□□ -1.18
SCARNA18-201ENST00000459004 HOXB3P14651 431 aaPredicted RBP7.65□□□□□ -1.18
SCARNA18-201ENST00000459004 RIMBP2O15034 1052 aa7.63□□□□□ -1.19
SCARNA18-201ENST00000459004 PTCD2Q8WV60 388 aaKnown RBP7.63□□□□□ -1.19
SCARNA18-201ENST00000459004 TBC1D12O60347 775 aa7.62□□□□□ -1.19
SCARNA18-201ENST00000459004 ZNF710Q8N1W2 664 aa7.62□□□□□ -1.19
SCARNA18-201ENST00000459004 ZSWIM6Q9HCJ5 1215 aa7.62□□□□□ -1.19
SCARNA18-201ENST00000459004 P3H3Q8IVL6 736 aa7.61□□□□□ -1.19
SCARNA18-201ENST00000459004 OXER1Q8TDS5 423 aa7.61□□□□□ -1.19
SCARNA18-201ENST00000459004 EMILIN3Q9NT22 766 aa7.61□□□□□ -1.19
SCARNA18-201ENST00000459004 ARIH1Q9Y4X5 557 aaPredicted RBP7.6□□□□□ -1.19
SCARNA18-201ENST00000459004 PCDHGA4Q9Y5G9 962 aa7.6□□□□□ -1.19
SCARNA18-201ENST00000459004 MAP3K9P80192 1104 aa7.59□□□□□ -1.19
SCARNA18-201ENST00000459004 UPF1Q92900 1129 aaKnown RBP eCLIP7.59□□□□□ -1.19
SCARNA18-201ENST00000459004 FAM163AQ96GL9 167 aaPredicted RBP7.59□□□□□ -1.19
SCARNA18-201ENST00000459004 GPR153Q6NV75 609 aa7.58□□□□□ -1.2
SCARNA18-201ENST00000459004 KCNV2Q8TDN2 545 aa7.58□□□□□ -1.2
SCARNA18-201ENST00000459004 ARHGEF1Q92888 912 aaKnown RBP7.58□□□□□ -1.2
SCARNA18-201ENST00000459004 ST18O60284 1047 aa7.57□□□□□ -1.2
SCARNA18-201ENST00000459004 HOXB1P14653 301 aaPredicted RBP7.57□□□□□ -1.2
SCARNA18-201ENST00000459004 ARSIQ5FYB1 569 aa7.57□□□□□ -1.2
SCARNA18-201ENST00000459004 DPYSL4O14531 572 aa7.56□□□□□ -1.2
SCARNA18-201ENST00000459004 SPDYE16A6NNV3 312 aaPredicted RBP7.54□□□□□ -1.2
SCARNA18-201ENST00000459004 EVI5O60447 810 aa7.53□□□□□ -1.2
SCARNA18-201ENST00000459004 NUDT7P0C024 238 aa7.53□□□□□ -1.2
SCARNA18-201ENST00000459004 KHSRPQ92945 711 aaKnown RBP eCLIP7.53□□□□□ -1.2
SCARNA18-201ENST00000459004 KDM4FA0A1W2PPD8 638 aa7.52□□□□□ -1.21
SCARNA18-201ENST00000459004 ZNF316A6NFI3 1004 aaPredicted RBP7.52□□□□□ -1.21
SCARNA18-201ENST00000459004 PDIA6Q15084 440 aa7.52□□□□□ -1.21
SCARNA18-201ENST00000459004 ANO8Q9HCE9 1232 aaPredicted RBP7.52□□□□□ -1.21
SCARNA18-201ENST00000459004 LCE2DQ5TA82 110 aaPredicted RBP7.51□□□□□ -1.21
SCARNA18-201ENST00000459004 PTGER2P43116 358 aa7.48□□□□□ -1.21
SCARNA18-201ENST00000459004 EMP3P54852 163 aa7.48□□□□□ -1.21
SCARNA18-201ENST00000459004 LHX6Q9UPM6 363 aa7.48□□□□□ -1.21
SCARNA18-201ENST00000459004 MARVELD3Q96A59 401 aa7.47□□□□□ -1.21
SCARNA18-201ENST00000459004 PSDA5PKW4 1024 aaPredicted RBP7.46□□□□□ -1.22
SCARNA18-201ENST00000459004 ERBB3P21860 1342 aa7.46□□□□□ -1.22
SCARNA18-201ENST00000459004 NBR1Q14596 966 aa7.45□□□□□ -1.22
SCARNA18-201ENST00000459004 FAM205CA6NFA0 338 aa7.44□□□□□ -1.22
SCARNA18-201ENST00000459004 SEMA3EO15041 775 aa7.44□□□□□ -1.22
SCARNA18-201ENST00000459004 PHF14O94880 888 aa7.43□□□□□ -1.22
SCARNA18-201ENST00000459004 FOSBP53539 338 aa7.43□□□□□ -1.22
SCARNA18-201ENST00000459004 JPH4Q96JJ6 628 aa7.43□□□□□ -1.22
SCARNA18-201ENST00000459004 EPAS1Q99814 870 aa7.43□□□□□ -1.22
SCARNA18-201ENST00000459004 TESPA1A2RU30 521 aaPredicted RBP7.42□□□□□ -1.22
SCARNA18-201ENST00000459004 GRXCR2A6NFK2 248 aa7.42□□□□□ -1.22
SCARNA18-201ENST00000459004 VARS2Q5ST30 1063 aaKnown RBP7.42□□□□□ -1.22
SCARNA18-201ENST00000459004 SMYD5Q6GMV2 418 aa7.42□□□□□ -1.22
SCARNA18-201ENST00000459004 ZNF454Q8N9F8 522 aa7.42□□□□□ -1.22
SCARNA18-201ENST00000459004 DDX12PQ92771 950 aa7.42□□□□□ -1.22
SCARNA18-201ENST00000459004 MLLT3P42568 568 aaPredicted RBP7.41□□□□□ -1.22
SCARNA18-201ENST00000459004 PPP4R3BQ5MIZ7 849 aa7.41□□□□□ -1.22
SCARNA18-201ENST00000459004 BCANQ96GW7 911 aa7.41□□□□□ -1.22
SCARNA18-201ENST00000459004 HS3ST6Q96QI5 342 aa7.41□□□□□ -1.22
SCARNA18-201ENST00000459004 PCDHGA10Q9Y5H3 936 aa7.41□□□□□ -1.22
SCARNA18-201ENST00000459004 TYW1BQ6NUM6 668 aa7.4□□□□□ -1.22
SCARNA18-201ENST00000459004 POTEGQ6S5H5 508 aa7.4□□□□□ -1.22
SCARNA18-201ENST00000459004 FBXW7Q969H0 707 aa7.4□□□□□ -1.22
SCARNA18-201ENST00000459004 ZDHHC16Q969W1 377 aa7.4□□□□□ -1.22
SCARNA18-201ENST00000459004 POTEMA6NI47 508 aa7.39□□□□□ -1.23
SCARNA18-201ENST00000459004 ZNF687Q8N1G0 1237 aa7.39□□□□□ -1.23
SCARNA18-201ENST00000459004 POTEB3A0JP26 581 aa7.38□□□□□ -1.23
SCARNA18-201ENST00000459004 TULP1O00294 542 aaPredicted RBP7.38□□□□□ -1.23
SCARNA18-201ENST00000459004 OSBPP22059 807 aa7.38□□□□□ -1.23
SCARNA18-201ENST00000459004 POTEBQ6S5H4 581 aa7.38□□□□□ -1.23
SCARNA18-201ENST00000459004 EN1Q05925 392 aaPredicted RBP7.36□□□□□ -1.23
SCARNA18-201ENST00000459004 ADAM33Q9BZ11 813 aa7.36□□□□□ -1.23
SCARNA18-201ENST00000459004 BCL2L12Q9HB09 334 aa7.36□□□□□ -1.23
SCARNA18-201ENST00000459004 PBX2P40425 430 aa7.35□□□□□ -1.23
SCARNA18-201ENST00000459004 RBM33Q96EV2 1170 aaKnown RBP7.34□□□□□ -1.23
SCARNA18-201ENST00000459004 ARHGAP33O14559 1287 aa7.33□□□□□ -1.24
SCARNA18-201ENST00000459004 MAP3K7O43318 606 aa7.33□□□□□ -1.24
SCARNA18-201ENST00000459004 PTPREP23469 700 aa7.33□□□□□ -1.24
SCARNA18-201ENST00000459004 PRIM1P49642 420 aaKnown RBP7.33□□□□□ -1.24
SCARNA18-201ENST00000459004 C6orf132Q5T0Z8 1188 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms