RNA–Protein interactions for RNA: ENST00000458591.6

SCFD1-203, Transcript of sec1 family domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCFD1, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-203ENST00000458591 MIA2Q96PC5 1412 aa19.63■□□□□ 0.73
SCFD1-203ENST00000458591 ADAMTS12P58397 1594 aa19.63■□□□□ 0.73
SCFD1-203ENST00000458591 SLC4A1APQ9BWU0 796 aaKnown RBP19.62■□□□□ 0.73
SCFD1-203ENST00000458591 ABCC5O15440 1437 aa19.61■□□□□ 0.73
SCFD1-203ENST00000458591 ANKRD30BQ9BXX2 1392 aa19.61■□□□□ 0.73
SCFD1-203ENST00000458591 DAPK1P53355 1430 aa19.61■□□□□ 0.73
SCFD1-203ENST00000458591 CCDC7Q96M83 1385 aa19.6■□□□□ 0.73
SCFD1-203ENST00000458591 CNTLNQ9NXG0 1405 aa19.59■□□□□ 0.73
SCFD1-203ENST00000458591 PRKRIP1Q9H875 184 aaPredicted RBP19.59■□□□□ 0.73
SCFD1-203ENST00000458591 AKNAQ7Z591 1439 aa19.59■□□□□ 0.73
SCFD1-203ENST00000458591 ZNF777Q9ULD5 760 aaPredicted RBP19.57■□□□□ 0.72
SCFD1-203ENST00000458591 SENP3-EIF4A1A0A087X0R7 540 aa19.56■□□□□ 0.72
SCFD1-203ENST00000458591 MRS2Q9HD23 443 aa19.56■□□□□ 0.72
SCFD1-203ENST00000458591 DISP1Q96F81 1524 aa19.56■□□□□ 0.72
SCFD1-203ENST00000458591 NCOA1Q15788 1441 aa19.55■□□□□ 0.72
SCFD1-203ENST00000458591 NUP153P49790 1475 aaKnown RBP19.55■□□□□ 0.72
SCFD1-203ENST00000458591 KIF7Q2M1P5 1343 aa19.55■□□□□ 0.72
SCFD1-203ENST00000458591 ZNF326Q5BKZ1 582 aaKnown RBP19.55■□□□□ 0.72
SCFD1-203ENST00000458591 PRG4Q92954 1404 aaPredicted RBP19.54■□□□□ 0.72
SCFD1-203ENST00000458591 POLR3GLQ9BT43 218 aa19.54■□□□□ 0.72
SCFD1-203ENST00000458591 RPRD2Q5VT52 1461 aaKnown RBP19.53■□□□□ 0.72
SCFD1-203ENST00000458591 MRC2Q9UBG0 1479 aa19.53■□□□□ 0.72
SCFD1-203ENST00000458591 TEX14Q8IWB6 1497 aa19.52■□□□□ 0.72
SCFD1-203ENST00000458591 ROCK1Q13464 1354 aa19.5■□□□□ 0.71
SCFD1-203ENST00000458591 MSH5O43196 834 aa19.5■□□□□ 0.71
SCFD1-203ENST00000458591 CFDP1Q9UEE9 299 aaPredicted RBP19.49■□□□□ 0.71
SCFD1-203ENST00000458591 FBLN2P98095 1184 aa19.49■□□□□ 0.71
SCFD1-203ENST00000458591 KIAA0556O60303 1618 aa19.49■□□□□ 0.71
SCFD1-203ENST00000458591 KIAA0586Q9BVV6 1533 aa19.48■□□□□ 0.71
SCFD1-203ENST00000458591 SPATA31E1Q6ZUB1 1445 aa19.47■□□□□ 0.71
SCFD1-203ENST00000458591 DNMT1P26358 1616 aaKnown RBP19.47■□□□□ 0.71
SCFD1-203ENST00000458591 PZPP20742 1482 aa19.45■□□□□ 0.7
SCFD1-203ENST00000458591 PLB1Q6P1J6 1458 aa19.45■□□□□ 0.7
SCFD1-203ENST00000458591 CDK11AQ9UQ88 783 aaPredicted RBP19.45■□□□□ 0.7
SCFD1-203ENST00000458591 PKD2Q13563 968 aa19.44■□□□□ 0.7
SCFD1-203ENST00000458591 B4GALNT3Q6L9W6 998 aa19.44■□□□□ 0.7
SCFD1-203ENST00000458591 RAPGEF6Q8TEU7 1601 aa19.42■□□□□ 0.7
SCFD1-203ENST00000458591 CAMSAP2Q08AD1 1489 aa19.42■□□□□ 0.7
SCFD1-203ENST00000458591 GRIN2AQ12879 1464 aa19.42■□□□□ 0.7
SCFD1-203ENST00000458591 IFT140Q96RY7 1462 aa19.42■□□□□ 0.7
SCFD1-203ENST00000458591 CHMP7Q8WUX9 453 aaPredicted RBP19.4■□□□□ 0.7
SCFD1-203ENST00000458591 GPATCH8Q9UKJ3 1502 aaKnown RBP19.39■□□□□ 0.69
SCFD1-203ENST00000458591 TROQ12816 1431 aaPredicted RBP19.39■□□□□ 0.69
SCFD1-203ENST00000458591 ZBED9Q6R2W3 1325 aa19.38■□□□□ 0.69
SCFD1-203ENST00000458591 KIF14Q15058 1648 aa19.38■□□□□ 0.69
SCFD1-203ENST00000458591 PPP4R2Q9NY27 417 aa19.37■□□□□ 0.69
SCFD1-203ENST00000458591 DHX29Q7Z478 1369 aaKnown RBP19.35■□□□□ 0.69
SCFD1-203ENST00000458591 USP47Q96K76 1375 aa19.35■□□□□ 0.69
SCFD1-203ENST00000458591 KDM2AQ9Y2K7 1162 aa19.35■□□□□ 0.69
SCFD1-203ENST00000458591 KIAA1107Q9UPP5 1409 aa19.34■□□□□ 0.69
SCFD1-203ENST00000458591 EIF4G3O43432 1585 aaKnown RBP19.33■□□□□ 0.69
SCFD1-203ENST00000458591 BCORL1Q5H9F3 1711 aa19.33■□□□□ 0.68
SCFD1-203ENST00000458591 JPH4Q96JJ6 628 aa19.32■□□□□ 0.68
SCFD1-203ENST00000458591 CEP170Q5SW79 1584 aa19.31■□□□□ 0.68
SCFD1-203ENST00000458591 MBD5Q9P267 1494 aa19.3■□□□□ 0.68
SCFD1-203ENST00000458591 NUP155O75694 1391 aa19.29■□□□□ 0.68
SCFD1-203ENST00000458591 ANKRD50Q9ULJ7 1429 aa19.29■□□□□ 0.68
SCFD1-203ENST00000458591 HNRNPMP52272 730 aaKnown RBP eCLIP19.29■□□□□ 0.682e-6■■■■□ 19.7
SCFD1-203ENST00000458591 ANKRD30AQ9BXX3 1397 aa19.28■□□□□ 0.68
SCFD1-203ENST00000458591 CARD11Q9BXL7 1154 aa19.27■□□□□ 0.67
SCFD1-203ENST00000458591 PLEKHD1A6NEE1 506 aa19.26■□□□□ 0.67
SCFD1-203ENST00000458591 ERICH6BQ5W0A0 696 aa19.25■□□□□ 0.67
SCFD1-203ENST00000458591 ST20-MTHFSA0A0A6YYL1 179 aa19.25■□□□□ 0.67
SCFD1-203ENST00000458591 FANCIQ9NVI1 1328 aa19.24■□□□□ 0.67
SCFD1-203ENST00000458591 DCAF11Q8TEB1 546 aa19.24■□□□□ 0.67
SCFD1-203ENST00000458591 ADGRL2O95490 1459 aa19.24■□□□□ 0.67
SCFD1-203ENST00000458591 PNISRQ8TF01 805 aaKnown RBP19.21■□□□□ 0.67
SCFD1-203ENST00000458591 ERCC6Q03468 1493 aa19.21■□□□□ 0.67
SCFD1-203ENST00000458591 KDM5CP41229 1560 aa19.21■□□□□ 0.67
SCFD1-203ENST00000458591 ADGBQ8N7X0 1667 aa19.21■□□□□ 0.67
SCFD1-203ENST00000458591 C9orf84Q5VXU9 1444 aa19.2■□□□□ 0.66
SCFD1-203ENST00000458591 SYNJ2O15056 1496 aa19.2■□□□□ 0.66
SCFD1-203ENST00000458591 ITSN2Q9NZM3 1697 aa19.2■□□□□ 0.66
SCFD1-203ENST00000458591 ATP10BO94823 1461 aa19.2■□□□□ 0.66
SCFD1-203ENST00000458591 TMC1Q8TDI8 760 aa19.2■□□□□ 0.66
SCFD1-203ENST00000458591 NUDCQ9Y266 331 aa19.2■□□□□ 0.66
SCFD1-203ENST00000458591 POLR1AO95602 1720 aaPredicted RBP19.2■□□□□ 0.66
SCFD1-203ENST00000458591 TSPY4P0CV99 314 aa19.19■□□□□ 0.66
SCFD1-203ENST00000458591 TSPY10P0CW01 314 aa19.19■□□□□ 0.66
SCFD1-203ENST00000458591 SALL2Q9Y467 1007 aaPredicted RBP19.19■□□□□ 0.66
SCFD1-203ENST00000458591 CARMIL2Q6F5E8 1435 aa19.18■□□□□ 0.66
SCFD1-203ENST00000458591 SMG6Q86US8 1419 aaKnown RBP19.18■□□□□ 0.66
SCFD1-203ENST00000458591 MAGI1Q96QZ7 1491 aaPredicted RBP19.17■□□□□ 0.66
SCFD1-203ENST00000458591 CROCC2H7BZ55 1655 aa19.17■□□□□ 0.66
SCFD1-203ENST00000458591 ABCC10Q5T3U5 1492 aa19.17■□□□□ 0.66
SCFD1-203ENST00000458591 RGL3Q3MIN7 710 aa19.16■□□□□ 0.66
SCFD1-203ENST00000458591 ADCY10Q96PN6 1610 aa19.16■□□□□ 0.66
SCFD1-203ENST00000458591 KIF15Q9NS87 1388 aa19.15■□□□□ 0.66
SCFD1-203ENST00000458591 ERICH6Q7L0X2 663 aa19.14■□□□□ 0.66
SCFD1-203ENST00000458591 UHRF1BP1Q6BDS2 1440 aa19.14■□□□□ 0.65
SCFD1-203ENST00000458591 CDC42BPAQ5VT25 1732 aa19.13■□□□□ 0.65
SCFD1-203ENST00000458591 BCL11AQ9H165 835 aa19.13■□□□□ 0.65
SCFD1-203ENST00000458591 RALGAPBQ86X10 1494 aa19.13■□□□□ 0.65
SCFD1-203ENST00000458591 NUP160Q12769 1436 aa19.13■□□□□ 0.65
SCFD1-203ENST00000458591 NBPF1Q3BBV0 1214 aa19.13■□□□□ 0.65
SCFD1-203ENST00000458591 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.12■□□□□ 0.652e-7■□□□□ 10.1
SCFD1-203ENST00000458591 CCDC136Q96JN2 1154 aa19.11■□□□□ 0.65
SCFD1-203ENST00000458591 ABCA8O94911 1581 aa19.1■□□□□ 0.65
SCFD1-203ENST00000458591 ROCK2O75116 1388 aaKnown RBP19.1■□□□□ 0.65
SCFD1-203ENST00000458591 ARID4BQ4LE39 1312 aaPredicted RBP19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 1197.5 ms