RNA–Protein interactions for RNA: ENST00000458028.1

LINC01013-205, Transcript of long intergenic non-protein coding RNA 1013, humanhuman

TSL 1 (best) BASIC

Gene LINC01013, Length 1,345 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01013-205ENST00000458028 KDM4CQ9H3R0 1056 aa14.35□□□□□ -0.11
LINC01013-205ENST00000458028 RSPH6AQ9H0K4 717 aa14.33□□□□□ -0.12
LINC01013-205ENST00000458028 MLLT3P42568 568 aaPredicted RBP14.3□□□□□ -0.12
LINC01013-205ENST00000458028 SP7Q8TDD2 431 aaPredicted RBP14.3□□□□□ -0.12
LINC01013-205ENST00000458028 SPDYE16A6NNV3 312 aaPredicted RBP14.29□□□□□ -0.12
LINC01013-205ENST00000458028 PDE4DQ08499 809 aa14.29□□□□□ -0.12
LINC01013-205ENST00000458028 TRIM66O15016 1216 aa14.28□□□□□ -0.12
LINC01013-205ENST00000458028 MKRN3Q13064 507 aaKnown RBP14.28□□□□□ -0.12
LINC01013-205ENST00000458028 PPP1R15BQ5SWA1 713 aa14.27□□□□□ -0.12
LINC01013-205ENST00000458028 GPHNQ9NQX3 736 aaPredicted RBP14.23□□□□□ -0.13
LINC01013-205ENST00000458028 TMEM106CQ9BVX2 250 aa14.21□□□□□ -0.13
LINC01013-205ENST00000458028 PODXL2Q9NZ53 605 aa14.19□□□□□ -0.14
LINC01013-205ENST00000458028 ZRANB1Q9UGI0 708 aa14.19□□□□□ -0.14
LINC01013-205ENST00000458028 DPYSL4O14531 572 aa14.17□□□□□ -0.14
LINC01013-205ENST00000458028 PDIA6Q15084 440 aa14.17□□□□□ -0.14
LINC01013-205ENST00000458028 DDRGK1Q96HY6 314 aa14.16□□□□□ -0.14
LINC01013-205ENST00000458028 UBTFP17480 764 aaKnown RBP14.15□□□□□ -0.14
LINC01013-205ENST00000458028 MINK1Q8N4C8 1332 aaPredicted RBP14.15□□□□□ -0.14
LINC01013-205ENST00000458028 C19orf67A6NJJ6 358 aa14.14□□□□□ -0.15
LINC01013-205ENST00000458028 ZNF316A6NFI3 1004 aaPredicted RBP14.13□□□□□ -0.15
LINC01013-205ENST00000458028 FLIIQ13045 1269 aa14.1□□□□□ -0.15
LINC01013-205ENST00000458028 EMILIN3Q9NT22 766 aa14.1□□□□□ -0.15
LINC01013-205ENST00000458028 CD44P16070 742 aaKnown RBP14.09□□□□□ -0.15
LINC01013-205ENST00000458028 PHF12Q96QT6 1004 aa14.09□□□□□ -0.15
LINC01013-205ENST00000458028 FAM117AQ9C073 453 aa14.09□□□□□ -0.15
LINC01013-205ENST00000458028 TMC2Q8TDI7 906 aa14.08□□□□□ -0.16
LINC01013-205ENST00000458028 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.08□□□□□ -0.16
LINC01013-205ENST00000458028 RANGAP1P46060 587 aaPredicted RBP14.07□□□□□ -0.16
LINC01013-205ENST00000458028 MAP2K5Q13163 448 aa14.07□□□□□ -0.16
LINC01013-205ENST00000458028 DSG2Q14126 1118 aa14.06□□□□□ -0.16
LINC01013-205ENST00000458028 NUTM2FA1L443 756 aa14.04□□□□□ -0.16
LINC01013-205ENST00000458028 GPR37O15354 613 aa14.04□□□□□ -0.16
LINC01013-205ENST00000458028 FOXK1P85037 733 aa14.04□□□□□ -0.16
LINC01013-205ENST00000458028 AMHR2Q16671 573 aa14.03□□□□□ -0.16
LINC01013-205ENST00000458028 ILDR1Q86SU0 546 aaPredicted RBP14.03□□□□□ -0.16
LINC01013-205ENST00000458028 CCDC102AQ96A19 550 aa14.02□□□□□ -0.17
LINC01013-205ENST00000458028 ARID3AQ99856 593 aa14.02□□□□□ -0.17
LINC01013-205ENST00000458028 IRF6O14896 467 aa14.01□□□□□ -0.17
LINC01013-205ENST00000458028 TIE1P35590 1138 aa14.01□□□□□ -0.17
LINC01013-205ENST00000458028 GRXCR2A6NFK2 248 aa13.99□□□□□ -0.17
LINC01013-205ENST00000458028 MAP3K9P80192 1104 aa13.99□□□□□ -0.17
LINC01013-205ENST00000458028 GOPCQ9HD26 462 aa13.99□□□□□ -0.17
LINC01013-205ENST00000458028 GNPATO15228 680 aa13.98□□□□□ -0.17
LINC01013-205ENST00000458028 PLEKHG3A1L390 1219 aa13.97□□□□□ -0.17
LINC01013-205ENST00000458028 HIC1Q14526 733 aa13.97□□□□□ -0.17
LINC01013-205ENST00000458028 MS4A3Q96HJ5 214 aa13.97□□□□□ -0.17
LINC01013-205ENST00000458028 FCHSD2O94868 740 aa13.95□□□□□ -0.18
LINC01013-205ENST00000458028 PARP9Q8IXQ6 854 aa13.95□□□□□ -0.18
LINC01013-205ENST00000458028 PLPP6Q8IY26 295 aa13.94□□□□□ -0.18
LINC01013-205ENST00000458028 MICALL2Q8IY33 904 aa13.94□□□□□ -0.18
LINC01013-205ENST00000458028 APBB1O00213 710 aa13.93□□□□□ -0.18
LINC01013-205ENST00000458028 TRIM26Q12899 539 aaPredicted RBP13.93□□□□□ -0.18
LINC01013-205ENST00000458028 TRPC6Q9Y210 931 aa13.93□□□□□ -0.18
LINC01013-205ENST00000458028 TTLL13PA6NNM8 815 aa13.92□□□□□ -0.18
LINC01013-205ENST00000458028 GABBR2O75899 941 aa13.92□□□□□ -0.18
LINC01013-205ENST00000458028 TTLL12Q14166 644 aaPredicted RBP13.91□□□□□ -0.18
LINC01013-205ENST00000458028 G3V3G9 751 aa13.9□□□□□ -0.19
LINC01013-205ENST00000458028 PCMTD1Q96MG8 357 aaPredicted RBP13.9□□□□□ -0.19
LINC01013-205ENST00000458028 C1orf115Q9H7X2 142 aa13.89□□□□□ -0.19
LINC01013-205ENST00000458028 ARID3CA6NKF2 412 aa13.87□□□□□ -0.19
LINC01013-205ENST00000458028 OSBPP22059 807 aa13.87□□□□□ -0.19
LINC01013-205ENST00000458028 A6NJR5 290 aa13.86□□□□□ -0.19
LINC01013-205ENST00000458028 PTGER2P43116 358 aa13.86□□□□□ -0.19
LINC01013-205ENST00000458028 TRIM35Q9UPQ4 493 aa13.85□□□□□ -0.19
LINC01013-205ENST00000458028 TBC1D12O60347 775 aa13.84□□□□□ -0.19
LINC01013-205ENST00000458028 DPY19L2Q6NUT2 758 aa13.84□□□□□ -0.19
LINC01013-205ENST00000458028 C2orf72A6NCS6 295 aa13.83□□□□□ -0.2
LINC01013-205ENST00000458028 PDIA4P13667 645 aaKnown RBP13.82□□□□□ -0.2
LINC01013-205ENST00000458028 BMP2KQ9NSY1 1161 aaPredicted RBP13.82□□□□□ -0.2
LINC01013-205ENST00000458028 ONECUT3O60422 494 aaPredicted RBP13.8□□□□□ -0.2
LINC01013-205ENST00000458028 BOLA1Q9Y3E2 137 aa13.8□□□□□ -0.2
LINC01013-205ENST00000458028 KIF3CO14782 793 aa13.79□□□□□ -0.2
LINC01013-205ENST00000458028 HRCP23327 699 aa13.79□□□□□ -0.2
LINC01013-205ENST00000458028 GIGYF2Q6Y7W6 1299 aaKnown RBP13.79□□□□□ -0.2
LINC01013-205ENST00000458028 ZBTB7CA1YPR0 619 aa13.78□□□□□ -0.2
LINC01013-205ENST00000458028 TRAK2O60296 914 aa13.78□□□□□ -0.2
LINC01013-205ENST00000458028 FECHP22830 423 aa13.78□□□□□ -0.2
LINC01013-205ENST00000458028 UPF1Q92900 1129 aaKnown RBP eCLIP13.78□□□□□ -0.2
LINC01013-205ENST00000458028 TMEM121BQ9BXQ6 578 aaPredicted RBP13.78□□□□□ -0.2
LINC01013-205ENST00000458028 DDX12PQ92771 950 aa13.77□□□□□ -0.21
LINC01013-205ENST00000458028 PTGDRQ13258 359 aa13.76□□□□□ -0.21
LINC01013-205ENST00000458028 PDCD7Q8N8D1 485 aaKnown RBP13.75□□□□□ -0.21
LINC01013-205ENST00000458028 SH3D19Q5HYK7 790 aa13.74□□□□□ -0.21
LINC01013-205ENST00000458028 OXER1Q8TDS5 423 aa13.74□□□□□ -0.21
LINC01013-205ENST00000458028 MS4A1P11836 297 aa13.73□□□□□ -0.21
LINC01013-205ENST00000458028 OCEL1Q9H607 264 aa13.73□□□□□ -0.21
LINC01013-205ENST00000458028 CLCN1P35523 988 aa13.72□□□□□ -0.21
LINC01013-205ENST00000458028 CLUAP1Q96AJ1 413 aa13.72□□□□□ -0.21
LINC01013-205ENST00000458028 NPM2Q86SE8 214 aaKnown RBP13.71□□□□□ -0.21
LINC01013-205ENST00000458028 CCDC82Q8N4S0 544 aa13.71□□□□□ -0.21
LINC01013-205ENST00000458028 POTEIP0CG38 1075 aa13.7□□□□□ -0.22
LINC01013-205ENST00000458028 EVI5O60447 810 aa13.68□□□□□ -0.22
LINC01013-205ENST00000458028 CLCN6P51797 869 aa13.68□□□□□ -0.22
LINC01013-205ENST00000458028 MCM6Q14566 821 aa13.68□□□□□ -0.22
LINC01013-205ENST00000458028 L3MBTL3Q96JM7 780 aaPredicted RBP13.68□□□□□ -0.22
LINC01013-205ENST00000458028 RAD21O60216 631 aa13.67□□□□□ -0.22
LINC01013-205ENST00000458028 SKIV2LQ15477 1246 aaKnown RBP13.67□□□□□ -0.22
LINC01013-205ENST00000458028 IER5LQ5T953 404 aa13.67□□□□□ -0.22
LINC01013-205ENST00000458028 ATP1B4Q9UN42 357 aaPredicted RBP13.67□□□□□ -0.22
LINC01013-205ENST00000458028 GPCPD1Q9NPB8 672 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms