RNA–Protein interactions for RNA: ENST00000457461.1

CUBNP3-201, Transcript of cubilin pseudogene 3, humanhuman

BASIC

Gene CUBNP3, Length 1,784 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUBNP3-201ENST00000457461 DMRT2Q9Y5R5 561 aa9.79□□□□□ -0.84
CUBNP3-201ENST00000457461 ABCC2Q92887 1545 aa9.78□□□□□ -0.84
CUBNP3-201ENST00000457461 CCNB3Q8WWL7 1395 aa9.78□□□□□ -0.84
CUBNP3-201ENST00000457461 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.78□□□□□ -0.84
CUBNP3-201ENST00000457461 UHRF1BP1LA0JNW5 1464 aa9.77□□□□□ -0.84
CUBNP3-201ENST00000457461 UACAQ9BZF9 1416 aa9.77□□□□□ -0.85
CUBNP3-201ENST00000457461 ATP1B4Q9UN42 357 aaPredicted RBP9.77□□□□□ -0.85
CUBNP3-201ENST00000457461 ATP10BO94823 1461 aa9.77□□□□□ -0.85
CUBNP3-201ENST00000457461 TSHZ2Q9NRE2 1034 aa9.76□□□□□ -0.85
CUBNP3-201ENST00000457461 TROQ12816 1431 aaPredicted RBP9.76□□□□□ -0.85
CUBNP3-201ENST00000457461 MYOM3Q5VTT5 1437 aa9.75□□□□□ -0.85
CUBNP3-201ENST00000457461 FGD6Q6ZV73 1430 aa9.75□□□□□ -0.85
CUBNP3-201ENST00000457461 OSCARQ8IYS5 282 aa9.74□□□□□ -0.85
CUBNP3-201ENST00000457461 TCOF1Q13428 1488 aaKnown RBP9.73□□□□□ -0.85
CUBNP3-201ENST00000457461 KDM5BQ9UGL1 1544 aa9.73□□□□□ -0.85
CUBNP3-201ENST00000457461 KIF14Q15058 1648 aa9.73□□□□□ -0.85
CUBNP3-201ENST00000457461 PTPN23Q9H3S7 1636 aa9.72□□□□□ -0.85
CUBNP3-201ENST00000457461 ITSN2Q9NZM3 1697 aa9.72□□□□□ -0.85
CUBNP3-201ENST00000457461 MIA2Q96PC5 1412 aa9.72□□□□□ -0.85
CUBNP3-201ENST00000457461 ZCCHC11Q5TAX3 1644 aaKnown RBP9.72□□□□□ -0.85
CUBNP3-201ENST00000457461 CDK11AQ9UQ88 783 aaPredicted RBP9.71□□□□□ -0.85
CUBNP3-201ENST00000457461 ABCC10Q5T3U5 1492 aa9.7□□□□□ -0.86
CUBNP3-201ENST00000457461 CDC42BPAQ5VT25 1732 aa9.7□□□□□ -0.86
CUBNP3-201ENST00000457461 HOXD11P31277 338 aaPredicted RBP9.7□□□□□ -0.86
CUBNP3-201ENST00000457461 FOXD4L1Q9NU39 408 aa9.68□□□□□ -0.86
CUBNP3-201ENST00000457461 PDIA4P13667 645 aaKnown RBP9.68□□□□□ -0.86
CUBNP3-201ENST00000457461 GPATCH8Q9UKJ3 1502 aaKnown RBP9.67□□□□□ -0.86
CUBNP3-201ENST00000457461 ARID3CA6NKF2 412 aa9.67□□□□□ -0.86
CUBNP3-201ENST00000457461 GLIPR1L2Q4G1C9 344 aa9.67□□□□□ -0.86
CUBNP3-201ENST00000457461 SALL2Q9Y467 1007 aaPredicted RBP9.66□□□□□ -0.86
CUBNP3-201ENST00000457461 PREX2Q70Z35 1606 aa9.66□□□□□ -0.86
CUBNP3-201ENST00000457461 HNRNPUL2Q1KMD3 747 aaKnown RBP9.65□□□□□ -0.86
CUBNP3-201ENST00000457461 CDC42BPBQ9Y5S2 1711 aa9.65□□□□□ -0.86
CUBNP3-201ENST00000457461 DNMT1P26358 1616 aaKnown RBP9.65□□□□□ -0.86
CUBNP3-201ENST00000457461 PLEKHD1A6NEE1 506 aa9.65□□□□□ -0.87
CUBNP3-201ENST00000457461 TTC37Q6PGP7 1564 aa9.64□□□□□ -0.87
CUBNP3-201ENST00000457461 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.64□□□□□ -0.87
CUBNP3-201ENST00000457461 CROCC2H7BZ55 1655 aa9.63□□□□□ -0.87
CUBNP3-201ENST00000457461 PTPRKQ15262 1439 aa9.63□□□□□ -0.87
CUBNP3-201ENST00000457461 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.63□□□□□ -0.87
CUBNP3-201ENST00000457461 PDE4CQ08493 712 aa9.63□□□□□ -0.87
CUBNP3-201ENST00000457461 DIEXFQ68CQ4 756 aaKnown RBP9.63□□□□□ -0.87
CUBNP3-201ENST00000457461 MYO5CQ9NQX4 1742 aa9.63□□□□□ -0.87
CUBNP3-201ENST00000457461 AKNAQ7Z591 1439 aa9.63□□□□□ -0.87
CUBNP3-201ENST00000457461 GCC2Q8IWJ2 1684 aa9.62□□□□□ -0.87
CUBNP3-201ENST00000457461 RIMBP3CA6NJZ7 1639 aa9.62□□□□□ -0.87
CUBNP3-201ENST00000457461 RIMBP3BA6NNM3 1639 aa9.62□□□□□ -0.87
CUBNP3-201ENST00000457461 RIMBP3Q9UFD9 1639 aa9.62□□□□□ -0.87
CUBNP3-201ENST00000457461 HOMEZQ8IX15 550 aa9.62□□□□□ -0.87
CUBNP3-201ENST00000457461 CAMSAP2Q08AD1 1489 aa9.62□□□□□ -0.87
CUBNP3-201ENST00000457461 FAM50AQ14320 339 aaKnown RBP9.61□□□□□ -0.87
CUBNP3-201ENST00000457461 ARAP3Q8WWN8 1544 aa9.61□□□□□ -0.87
CUBNP3-201ENST00000457461 HFM1A2PYH4 1435 aa9.61□□□□□ -0.87
CUBNP3-201ENST00000457461 WDR7Q9Y4E6 1490 aa9.61□□□□□ -0.87
CUBNP3-201ENST00000457461 ABCA9Q8IUA7 1624 aa9.6□□□□□ -0.87
CUBNP3-201ENST00000457461 FGD1P98174 961 aa9.6□□□□□ -0.87
CUBNP3-201ENST00000457461 ADGBQ8N7X0 1667 aa9.6□□□□□ -0.87
CUBNP3-201ENST00000457461 DAPK1P53355 1430 aa9.6□□□□□ -0.87
CUBNP3-201ENST00000457461 SETD5Q9C0A6 1442 aa9.6□□□□□ -0.87
CUBNP3-201ENST00000457461 ARHGEF5Q12774 1597 aa9.59□□□□□ -0.87
CUBNP3-201ENST00000457461 SAMD9LQ8IVG5 1584 aa9.59□□□□□ -0.87
CUBNP3-201ENST00000457461 ABCC5O15440 1437 aa9.58□□□□□ -0.88
CUBNP3-201ENST00000457461 KLHL34Q8N239 644 aa9.58□□□□□ -0.88
CUBNP3-201ENST00000457461 SHANK2Q9UPX8 1470 aa9.58□□□□□ -0.88
CUBNP3-201ENST00000457461 ROCK1Q13464 1354 aa9.58□□□□□ -0.88
CUBNP3-201ENST00000457461 RAB3GAP2Q9H2M9 1393 aa9.58□□□□□ -0.88
CUBNP3-201ENST00000457461 NAIPQ13075 1403 aa9.58□□□□□ -0.88
CUBNP3-201ENST00000457461 TAF7LQ5H9L4 462 aa9.58□□□□□ -0.88
CUBNP3-201ENST00000457461 ADGRL2O95490 1459 aa9.57□□□□□ -0.88
CUBNP3-201ENST00000457461 FANCIQ9NVI1 1328 aa9.57□□□□□ -0.88
CUBNP3-201ENST00000457461 CFDP1Q9UEE9 299 aaPredicted RBP9.57□□□□□ -0.88
CUBNP3-201ENST00000457461 DHX57Q6P158 1386 aaKnown RBP9.56□□□□□ -0.88
CUBNP3-201ENST00000457461 ASXL2Q76L83 1435 aa9.56□□□□□ -0.88
CUBNP3-201ENST00000457461 MAPKBP1O60336 1514 aa9.56□□□□□ -0.88
CUBNP3-201ENST00000457461 SUPT16HQ9Y5B9 1047 aaKnown RBP9.56□□□□□ -0.88
CUBNP3-201ENST00000457461 PLCH2O75038 1416 aa9.56□□□□□ -0.88
CUBNP3-201ENST00000457461 MBD5Q9P267 1494 aa9.56□□□□□ -0.88
CUBNP3-201ENST00000457461 SLC4A2P04920 1241 aa9.55□□□□□ -0.88
CUBNP3-201ENST00000457461 ITGAEP38570 1179 aa9.55□□□□□ -0.88
CUBNP3-201ENST00000457461 ZNF644Q9H582 1327 aaPredicted RBP9.55□□□□□ -0.88
CUBNP3-201ENST00000457461 MAST1Q9Y2H9 1570 aa9.55□□□□□ -0.88
CUBNP3-201ENST00000457461 DEKP35659 375 aaKnown RBP9.55□□□□□ -0.88
CUBNP3-201ENST00000457461 KIAA1107Q9UPP5 1409 aa9.54□□□□□ -0.88
CUBNP3-201ENST00000457461 PLEKHH2Q8IVE3 1493 aa9.54□□□□□ -0.88
CUBNP3-201ENST00000457461 ARHGAP5Q13017 1502 aa9.54□□□□□ -0.88
CUBNP3-201ENST00000457461 CCER1Q8TC90 406 aaPredicted RBP9.54□□□□□ -0.88
CUBNP3-201ENST00000457461 ABCC1P33527 1531 aa9.54□□□□□ -0.88
CUBNP3-201ENST00000457461 CCDC141Q6ZP82 1450 aa9.52□□□□□ -0.88
CUBNP3-201ENST00000457461 SYCP2Q9BX26 1530 aa9.52□□□□□ -0.88
CUBNP3-201ENST00000457461 KDM6BO15054 1643 aa9.52□□□□□ -0.89
CUBNP3-201ENST00000457461 NCOA1Q15788 1441 aa9.51□□□□□ -0.89
CUBNP3-201ENST00000457461 ZNF326Q5BKZ1 582 aaKnown RBP9.5□□□□□ -0.89
CUBNP3-201ENST00000457461 PLXNC1O60486 1568 aa9.5□□□□□ -0.89
CUBNP3-201ENST00000457461 ARHGEF12Q9NZN5 1544 aa9.5□□□□□ -0.89
CUBNP3-201ENST00000457461 C9orf84Q5VXU9 1444 aa9.5□□□□□ -0.89
CUBNP3-201ENST00000457461 TIMELESSQ9UNS1 1208 aa9.5□□□□□ -0.89
CUBNP3-201ENST00000457461 GLI2P10070 1586 aa9.5□□□□□ -0.89
CUBNP3-201ENST00000457461 CFAP74Q9C0B2 1584 aa9.5□□□□□ -0.89
CUBNP3-201ENST00000457461 RSPH4AQ5TD94 716 aa9.49□□□□□ -0.89
CUBNP3-201ENST00000457461 MAP3K4Q9Y6R4 1608 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms