RNA–Protein interactions for RNA: ENST00000457137.6

VIT-206, Transcript of vitrin, humanhuman

TSL 1 (best) BASIC

Gene VIT, Length 1,344 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIT-206ENST00000457137 OCEL1Q9H607 264 aa10.31□□□□□ -0.76
VIT-206ENST00000457137 RYDENQ9NUL5 291 aaKnown RBP10.31□□□□□ -0.76
VIT-206ENST00000457137 DCAF1Q9Y4B6 1507 aa10.29□□□□□ -0.76
VIT-206ENST00000457137 GOLGA2Q08379 1002 aa10.28□□□□□ -0.76
VIT-206ENST00000457137 NBR1Q14596 966 aa10.28□□□□□ -0.76
VIT-206ENST00000457137 TPRNQ4KMQ1 711 aa10.28□□□□□ -0.76
VIT-206ENST00000457137 PDAP1Q13442 181 aaKnown RBP10.27□□□□□ -0.77
VIT-206ENST00000457137 ST18O60284 1047 aa10.24□□□□□ -0.77
VIT-206ENST00000457137 CUX2O14529 1486 aa10.23□□□□□ -0.77
VIT-206ENST00000457137 MKRN3Q13064 507 aaKnown RBP10.23□□□□□ -0.77
VIT-206ENST00000457137 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.23□□□□□ -0.77
VIT-206ENST00000457137 PSEN1P49768 467 aa10.22□□□□□ -0.77
VIT-206ENST00000457137 CDAN1Q8IWY9 1227 aa10.21□□□□□ -0.78
VIT-206ENST00000457137 PDCD7Q8N8D1 485 aaKnown RBP10.18□□□□□ -0.78
VIT-206ENST00000457137 C3orf67Q6ZVT6 689 aa10.17□□□□□ -0.78
VIT-206ENST00000457137 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.17□□□□□ -0.78
VIT-206ENST00000457137 SNPHO15079 494 aa10.16□□□□□ -0.78
VIT-206ENST00000457137 L3MBTL3Q96JM7 780 aaPredicted RBP10.14□□□□□ -0.79
VIT-206ENST00000457137 MFRPQ9BY79 579 aa10.12□□□□□ -0.79
VIT-206ENST00000457137 ERCC6Q03468 1493 aa10.12□□□□□ -0.79
VIT-206ENST00000457137 CADPS2Q86UW7 1296 aa10.1□□□□□ -0.79
VIT-206ENST00000457137 MARVELD3Q96A59 401 aa10.1□□□□□ -0.79
VIT-206ENST00000457137 TMEM121BQ9BXQ6 578 aaPredicted RBP10.1□□□□□ -0.79
VIT-206ENST00000457137 CABP2Q9NPB3 220 aa10.1□□□□□ -0.79
VIT-206ENST00000457137 EFCAB3Q8N7B9 438 aa10.09□□□□□ -0.79
VIT-206ENST00000457137 WDR70Q9NW82 654 aa10.09□□□□□ -0.79
VIT-206ENST00000457137 NESP48681 1621 aa10.07□□□□□ -0.8
VIT-206ENST00000457137 P3H3Q8IVL6 736 aa10.07□□□□□ -0.8
VIT-206ENST00000457137 G3V3G9 751 aa10.06□□□□□ -0.8
VIT-206ENST00000457137 NLRP6P59044 892 aa10.06□□□□□ -0.8
VIT-206ENST00000457137 DPY19L2Q6NUT2 758 aa10.06□□□□□ -0.8
VIT-206ENST00000457137 PHF8Q9UPP1 1060 aa10.05□□□□□ -0.8
VIT-206ENST00000457137 SOX12O15370 315 aa10.04□□□□□ -0.8
VIT-206ENST00000457137 PPP1R37O75864 691 aa10.04□□□□□ -0.8
VIT-206ENST00000457137 NCAPD3P42695 1498 aa10.03□□□□□ -0.8
VIT-206ENST00000457137 EMP3P54852 163 aa10.03□□□□□ -0.8
VIT-206ENST00000457137 FBXO22Q8NEZ5 403 aa10.03□□□□□ -0.8
VIT-206ENST00000457137 ILDR1Q86SU0 546 aaPredicted RBP10.01□□□□□ -0.81
VIT-206ENST00000457137 BOLA1Q9Y3E2 137 aa10.01□□□□□ -0.81
VIT-206ENST00000457137 THOC2Q8NI27 1593 aaKnown RBP10□□□□□ -0.81
VIT-206ENST00000457137 KCNV2Q8TDN2 545 aa10□□□□□ -0.81
VIT-206ENST00000457137 ATAD2BQ9ULI0 1458 aa9.97□□□□□ -0.81
VIT-206ENST00000457137 SPNS2Q8IVW8 549 aa9.95□□□□□ -0.82
VIT-206ENST00000457137 FAM205CA6NFA0 338 aa9.94□□□□□ -0.82
VIT-206ENST00000457137 MMRN1Q13201 1228 aa9.93□□□□□ -0.82
VIT-206ENST00000457137 HS3ST6Q96QI5 342 aa9.92□□□□□ -0.82
VIT-206ENST00000457137 MS4A4AQ96JQ5 239 aa9.91□□□□□ -0.82
VIT-206ENST00000457137 SMARCA2P51531 1590 aa9.91□□□□□ -0.82
VIT-206ENST00000457137 HMGXB3Q12766 1538 aa9.9□□□□□ -0.82
VIT-206ENST00000457137 E2F4Q16254 413 aa9.9□□□□□ -0.82
VIT-206ENST00000457137 ZNF710Q8N1W2 664 aa9.9□□□□□ -0.82
VIT-206ENST00000457137 POTEB3A0JP26 581 aa9.89□□□□□ -0.83
VIT-206ENST00000457137 POTEBQ6S5H4 581 aa9.89□□□□□ -0.83
VIT-206ENST00000457137 KIF21AQ7Z4S6 1674 aa9.89□□□□□ -0.83
VIT-206ENST00000457137 HOXB3P14651 431 aaPredicted RBP9.88□□□□□ -0.83
VIT-206ENST00000457137 ARHGEF1Q92888 912 aaKnown RBP9.87□□□□□ -0.83
VIT-206ENST00000457137 LARP6Q9BRS8 491 aaKnown RBP9.87□□□□□ -0.83
VIT-206ENST00000457137 PDE4AP27815 886 aa9.86□□□□□ -0.83
VIT-206ENST00000457137 DOK7Q18PE1 504 aa9.86□□□□□ -0.83
VIT-206ENST00000457137 NCKAP5LQ9HCH0 1330 aa9.86□□□□□ -0.83
VIT-206ENST00000457137 SMARCA4P51532 1647 aa9.86□□□□□ -0.83
VIT-206ENST00000457137 TULP1O00294 542 aaPredicted RBP9.85□□□□□ -0.83
VIT-206ENST00000457137 LMOD2Q6P5Q4 547 aa9.85□□□□□ -0.83
VIT-206ENST00000457137 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.84□□□□□ -0.83
VIT-206ENST00000457137 KRTAP3-3Q9BYR6 98 aa9.84□□□□□ -0.83
VIT-206ENST00000457137 KRTAP3-2Q9BYR7 98 aa9.84□□□□□ -0.83
VIT-206ENST00000457137 MICALL2Q8IY33 904 aa9.83□□□□□ -0.84
VIT-206ENST00000457137 RIMBP2O15034 1052 aa9.82□□□□□ -0.84
VIT-206ENST00000457137 HOXB1P14653 301 aaPredicted RBP9.82□□□□□ -0.84
VIT-206ENST00000457137 ERBB3P21860 1342 aa9.82□□□□□ -0.84
VIT-206ENST00000457137 BAZ1BQ9UIG0 1483 aaKnown RBP9.82□□□□□ -0.84
VIT-206ENST00000457137 LAMC3Q9Y6N6 1575 aa9.82□□□□□ -0.84
VIT-206ENST00000457137 DDX27Q96GQ7 796 aaKnown RBP9.81□□□□□ -0.84
VIT-206ENST00000457137 CRISPLD2Q9H0B8 497 aa9.81□□□□□ -0.84
VIT-206ENST00000457137 SEMA3EO15041 775 aa9.8□□□□□ -0.84
VIT-206ENST00000457137 MFSD10Q14728 455 aa9.79□□□□□ -0.84
VIT-206ENST00000457137 TMEM92Q6UXU6 159 aa9.78□□□□□ -0.84
VIT-206ENST00000457137 BAZ1AQ9NRL2 1556 aaPredicted RBP9.78□□□□□ -0.84
VIT-206ENST00000457137 PDS5BQ9NTI5 1447 aa9.76□□□□□ -0.85
VIT-206ENST00000457137 PEG3Q9GZU2 1588 aa9.76□□□□□ -0.85
VIT-206ENST00000457137 WDR62O43379 1518 aa9.75□□□□□ -0.85
VIT-206ENST00000457137 MRC2Q9UBG0 1479 aa9.75□□□□□ -0.85
VIT-206ENST00000457137 TESPA1A2RU30 521 aaPredicted RBP9.75□□□□□ -0.85
VIT-206ENST00000457137 VARS2Q5ST30 1063 aaKnown RBP9.75□□□□□ -0.85
VIT-206ENST00000457137 PPP1R15BQ5SWA1 713 aa9.71□□□□□ -0.86
VIT-206ENST00000457137 ZSWIM6Q9HCJ5 1215 aa9.71□□□□□ -0.86
VIT-206ENST00000457137 MROH2BQ7Z745 1585 aa9.71□□□□□ -0.86
VIT-206ENST00000457137 CAMK2BQ13554 666 aa9.7□□□□□ -0.86
VIT-206ENST00000457137 SMYD5Q6GMV2 418 aa9.7□□□□□ -0.86
VIT-206ENST00000457137 GPHNQ9NQX3 736 aaPredicted RBP9.7□□□□□ -0.86
VIT-206ENST00000457137 CADPSQ9ULU8 1353 aa9.7□□□□□ -0.86
VIT-206ENST00000457137 ZC3H15Q8WU90 426 aaKnown RBP9.69□□□□□ -0.86
VIT-206ENST00000457137 ARIH1Q9Y4X5 557 aaPredicted RBP9.69□□□□□ -0.86
VIT-206ENST00000457137 RIMBP3CA6NJZ7 1639 aa9.68□□□□□ -0.86
VIT-206ENST00000457137 RIMBP3BA6NNM3 1639 aa9.68□□□□□ -0.86
VIT-206ENST00000457137 RIMBP3Q9UFD9 1639 aa9.68□□□□□ -0.86
VIT-206ENST00000457137 GPR153Q6NV75 609 aa9.67□□□□□ -0.86
VIT-206ENST00000457137 ARSIQ5FYB1 569 aa9.66□□□□□ -0.86
VIT-206ENST00000457137 TMC2Q8TDI7 906 aa9.66□□□□□ -0.86
VIT-206ENST00000457137 DSG2Q14126 1118 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms