RNA–Protein interactions for RNA: ENST00000456366.1

SNRPFP4-201, Transcript of small nuclear ribonucleoprotein polypeptide F pseudogene 4, humanhuman

BASIC

Gene SNRPFP4, Length 242 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPFP4-201ENST00000456366 L3MBTL3Q96JM7 780 aaPredicted RBP9.8□□□□□ -0.84
SNRPFP4-201ENST00000456366 C2orf72A6NCS6 295 aa9.77□□□□□ -0.85
SNRPFP4-201ENST00000456366 SLC24A1O60721 1099 aa9.74□□□□□ -0.85
SNRPFP4-201ENST00000456366 DSG2Q14126 1118 aa9.73□□□□□ -0.85
SNRPFP4-201ENST00000456366 C3orf67Q6ZVT6 689 aa9.73□□□□□ -0.85
SNRPFP4-201ENST00000456366 MFSD10Q14728 455 aa9.72□□□□□ -0.85
SNRPFP4-201ENST00000456366 GPHNQ9NQX3 736 aaPredicted RBP9.72□□□□□ -0.85
SNRPFP4-201ENST00000456366 LARP6Q9BRS8 491 aaKnown RBP9.7□□□□□ -0.86
SNRPFP4-201ENST00000456366 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.7□□□□□ -0.86
SNRPFP4-201ENST00000456366 G3V3G9 751 aa9.69□□□□□ -0.86
SNRPFP4-201ENST00000456366 SLAIN1Q8ND83 568 aa9.69□□□□□ -0.86
SNRPFP4-201ENST00000456366 FOXK1P85037 733 aa9.67□□□□□ -0.86
SNRPFP4-201ENST00000456366 SCUBE2Q9NQ36 999 aa9.67□□□□□ -0.86
SNRPFP4-201ENST00000456366 PPP1R15BQ5SWA1 713 aa9.66□□□□□ -0.86
SNRPFP4-201ENST00000456366 HOXB3P14651 431 aaPredicted RBP9.65□□□□□ -0.86
SNRPFP4-201ENST00000456366 VSIG10Q8N0Z9 540 aa9.65□□□□□ -0.86
SNRPFP4-201ENST00000456366 TMC2Q8TDI7 906 aa9.65□□□□□ -0.86
SNRPFP4-201ENST00000456366 PDE4AP27815 886 aa9.64□□□□□ -0.87
SNRPFP4-201ENST00000456366 MAMSTRQ6ZN01 415 aa9.64□□□□□ -0.87
SNRPFP4-201ENST00000456366 PLPP6Q8IY26 295 aa9.64□□□□□ -0.87
SNRPFP4-201ENST00000456366 DDX27Q96GQ7 796 aaKnown RBP9.64□□□□□ -0.87
SNRPFP4-201ENST00000456366 EMILIN3Q9NT22 766 aa9.64□□□□□ -0.87
SNRPFP4-201ENST00000456366 KCNV2Q8TDN2 545 aa9.62□□□□□ -0.87
SNRPFP4-201ENST00000456366 CAMK2BQ13554 666 aa9.61□□□□□ -0.87
SNRPFP4-201ENST00000456366 LCE2DQ5TA82 110 aaPredicted RBP9.6□□□□□ -0.87
SNRPFP4-201ENST00000456366 KHSRPQ92945 711 aaKnown RBP eCLIP9.55□□□□□ -0.88
SNRPFP4-201ENST00000456366 E2F4Q16254 413 aa9.54□□□□□ -0.88
SNRPFP4-201ENST00000456366 OXER1Q8TDS5 423 aa9.54□□□□□ -0.88
SNRPFP4-201ENST00000456366 UPF1Q92900 1129 aaKnown RBP eCLIP9.53□□□□□ -0.88
SNRPFP4-201ENST00000456366 KDM4FA0A1W2PPD8 638 aa9.52□□□□□ -0.89
SNRPFP4-201ENST00000456366 DPYSL4O14531 572 aa9.51□□□□□ -0.89
SNRPFP4-201ENST00000456366 SLC34A2O95436 690 aa9.51□□□□□ -0.89
SNRPFP4-201ENST00000456366 PTCD2Q8WV60 388 aaKnown RBP9.51□□□□□ -0.89
SNRPFP4-201ENST00000456366 GPR153Q6NV75 609 aa9.5□□□□□ -0.89
SNRPFP4-201ENST00000456366 WDR70Q9NW82 654 aa9.5□□□□□ -0.89
SNRPFP4-201ENST00000456366 PCDHGA4Q9Y5G9 962 aa9.49□□□□□ -0.89
SNRPFP4-201ENST00000456366 ARIH1Q9Y4X5 557 aaPredicted RBP9.48□□□□□ -0.89
SNRPFP4-201ENST00000456366 ST18O60284 1047 aa9.47□□□□□ -0.89
SNRPFP4-201ENST00000456366 ARSIQ5FYB1 569 aa9.47□□□□□ -0.89
SNRPFP4-201ENST00000456366 DOK7Q18PE1 504 aa9.44□□□□□ -0.9
SNRPFP4-201ENST00000456366 NUDT7P0C024 238 aa9.43□□□□□ -0.9
SNRPFP4-201ENST00000456366 PDIA6Q15084 440 aa9.43□□□□□ -0.9
SNRPFP4-201ENST00000456366 ARHGEF1Q92888 912 aaKnown RBP9.42□□□□□ -0.9
SNRPFP4-201ENST00000456366 FAM163AQ96GL9 167 aaPredicted RBP9.42□□□□□ -0.9
SNRPFP4-201ENST00000456366 POTEB3A0JP26 581 aa9.41□□□□□ -0.9
SNRPFP4-201ENST00000456366 HOXB1P14653 301 aaPredicted RBP9.41□□□□□ -0.9
SNRPFP4-201ENST00000456366 POTEBQ6S5H4 581 aa9.41□□□□□ -0.9
SNRPFP4-201ENST00000456366 MARVELD3Q96A59 401 aa9.41□□□□□ -0.9
SNRPFP4-201ENST00000456366 SEMA3EO15041 775 aa9.4□□□□□ -0.9
SNRPFP4-201ENST00000456366 MLLT3P42568 568 aaPredicted RBP9.4□□□□□ -0.9
SNRPFP4-201ENST00000456366 PRIM1P49642 420 aaKnown RBP9.4□□□□□ -0.9
SNRPFP4-201ENST00000456366 EVI5O60447 810 aa9.39□□□□□ -0.91
SNRPFP4-201ENST00000456366 P3H3Q8IVL6 736 aa9.39□□□□□ -0.91
SNRPFP4-201ENST00000456366 SNPHO15079 494 aa9.38□□□□□ -0.91
SNRPFP4-201ENST00000456366 ZNF710Q8N1W2 664 aa9.38□□□□□ -0.91
SNRPFP4-201ENST00000456366 ANO8Q9HCE9 1232 aaPredicted RBP9.38□□□□□ -0.91
SNRPFP4-201ENST00000456366 ZSWIM6Q9HCJ5 1215 aa9.38□□□□□ -0.91
SNRPFP4-201ENST00000456366 MAP3K9P80192 1104 aa9.37□□□□□ -0.91
SNRPFP4-201ENST00000456366 LHX6Q9UPM6 363 aa9.36□□□□□ -0.91
SNRPFP4-201ENST00000456366 TESPA1A2RU30 521 aaPredicted RBP9.33□□□□□ -0.92
SNRPFP4-201ENST00000456366 RIMBP2O15034 1052 aa9.33□□□□□ -0.92
SNRPFP4-201ENST00000456366 DDX12PQ92771 950 aa9.33□□□□□ -0.92
SNRPFP4-201ENST00000456366 PTGER2P43116 358 aa9.31□□□□□ -0.92
SNRPFP4-201ENST00000456366 POTEEQ6S8J3 1075 aa9.31□□□□□ -0.92
SNRPFP4-201ENST00000456366 PCDHGA10Q9Y5H3 936 aa9.31□□□□□ -0.92
SNRPFP4-201ENST00000456366 ZNF316A6NFI3 1004 aaPredicted RBP9.3□□□□□ -0.92
SNRPFP4-201ENST00000456366 SPDYE16A6NNV3 312 aaPredicted RBP9.3□□□□□ -0.92
SNRPFP4-201ENST00000456366 FOSBP53539 338 aa9.3□□□□□ -0.92
SNRPFP4-201ENST00000456366 TBC1D12O60347 775 aa9.29□□□□□ -0.92
SNRPFP4-201ENST00000456366 OSBPP22059 807 aa9.29□□□□□ -0.92
SNRPFP4-201ENST00000456366 EMP3P54852 163 aa9.29□□□□□ -0.92
SNRPFP4-201ENST00000456366 VARS2Q5ST30 1063 aaKnown RBP9.28□□□□□ -0.92
SNRPFP4-201ENST00000456366 FAM205CA6NFA0 338 aa9.27□□□□□ -0.93
SNRPFP4-201ENST00000456366 GRXCR2A6NFK2 248 aa9.27□□□□□ -0.93
SNRPFP4-201ENST00000456366 JPH4Q96JJ6 628 aa9.27□□□□□ -0.93
SNRPFP4-201ENST00000456366 HS3ST6Q96QI5 342 aa9.26□□□□□ -0.93
SNRPFP4-201ENST00000456366 ZNF454Q8N9F8 522 aa9.25□□□□□ -0.93
SNRPFP4-201ENST00000456366 ADAM33Q9BZ11 813 aa9.25□□□□□ -0.93
SNRPFP4-201ENST00000456366 NBR1Q14596 966 aa9.24□□□□□ -0.93
SNRPFP4-201ENST00000456366 RBM26Q5T8P6 1007 aaKnown RBP9.24□□□□□ -0.93
SNRPFP4-201ENST00000456366 CDHR5Q9HBB8 845 aa9.24□□□□□ -0.93
SNRPFP4-201ENST00000456366 TSR1Q2NL82 804 aaKnown RBP9.23□□□□□ -0.93
SNRPFP4-201ENST00000456366 POTEGQ6S5H5 508 aa9.23□□□□□ -0.93
SNRPFP4-201ENST00000456366 ERBB3P21860 1342 aa9.23□□□□□ -0.93
SNRPFP4-201ENST00000456366 PHF14O94880 888 aa9.22□□□□□ -0.93
SNRPFP4-201ENST00000456366 POTEMA6NI47 508 aa9.21□□□□□ -0.94
SNRPFP4-201ENST00000456366 GPR37O15354 613 aa9.21□□□□□ -0.94
SNRPFP4-201ENST00000456366 EN1Q05925 392 aaPredicted RBP9.2□□□□□ -0.94
SNRPFP4-201ENST00000456366 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.2□□□□□ -0.94
SNRPFP4-201ENST00000456366 RBM33Q96EV2 1170 aaKnown RBP9.2□□□□□ -0.94
SNRPFP4-201ENST00000456366 BCANQ96GW7 911 aa9.2□□□□□ -0.94
SNRPFP4-201ENST00000456366 AXIN2Q9Y2T1 843 aa9.2□□□□□ -0.94
SNRPFP4-201ENST00000456366 TYW1BQ6NUM6 668 aa9.19□□□□□ -0.94
SNRPFP4-201ENST00000456366 ZDHHC16Q969W1 377 aa9.19□□□□□ -0.94
SNRPFP4-201ENST00000456366 COL9A1P20849 921 aa9.18□□□□□ -0.94
SNRPFP4-201ENST00000456366 PSEN2P49810 448 aa9.18□□□□□ -0.94
SNRPFP4-201ENST00000456366 KRTAP3-3Q9BYR6 98 aa9.18□□□□□ -0.94
SNRPFP4-201ENST00000456366 KRTAP3-2Q9BYR7 98 aa9.18□□□□□ -0.94
SNRPFP4-201ENST00000456366 NPDC1Q9NQX5 325 aaPredicted RBP9.17□□□□□ -0.94
SNRPFP4-201ENST00000456366 PPP4R3BQ5MIZ7 849 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms