RNA–Protein interactions for RNA: ENST00000456331.6

PPP1R9A-208, Transcript of protein phosphatase 1 regulatory subunit 9A, humanhuman

TSL 1 (best) BASIC

Gene PPP1R9A, Length 10,090 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R9A-208ENST00000456331 RSPH6AQ9H0K4 717 aa5.05□□□□□ -1.6
PPP1R9A-208ENST00000456331 ARHGAP35Q9NRY4 1499 aa5.05□□□□□ -1.6
PPP1R9A-208ENST00000456331 DDX11L8A8MPP1 907 aa5.05□□□□□ -1.6
PPP1R9A-208ENST00000456331 HMMRO75330 724 aa5.05□□□□□ -1.6
PPP1R9A-208ENST00000456331 CCDC70Q6NSX1 233 aa5.05□□□□□ -1.6
PPP1R9A-208ENST00000456331 STAC3Q96MF2 364 aa5.05□□□□□ -1.6
PPP1R9A-208ENST00000456331 A0A0U1RQG5 324 aaPredicted RBP5.04□□□□□ -1.6
PPP1R9A-208ENST00000456331 OS9Q13438 667 aaPredicted RBP5.04□□□□□ -1.6
PPP1R9A-208ENST00000456331 DRC7Q8IY82 874 aa5.04□□□□□ -1.6
PPP1R9A-208ENST00000456331 MIER1Q8N108 512 aa5.04□□□□□ -1.6
PPP1R9A-208ENST00000456331 UACAQ9BZF9 1416 aa5.04□□□□□ -1.6
PPP1R9A-208ENST00000456331 GRWD1Q9BQ67 446 aaKnown RBP eCLIP5.04□□□□□ -1.64e-7■■■□□ 15.3
PPP1R9A-208ENST00000456331 SMARCA2P51531 1590 aa5.04□□□□□ -1.6
PPP1R9A-208ENST00000456331 TNNT3P45378 269 aaPredicted RBP5.04□□□□□ -1.6
PPP1R9A-208ENST00000456331 CALRP27797 417 aaKnown RBP5.04□□□□□ -1.6
PPP1R9A-208ENST00000456331 CARMIL2Q6F5E8 1435 aa5.04□□□□□ -1.6
PPP1R9A-208ENST00000456331 SETD5Q9C0A6 1442 aa5.03□□□□□ -1.6
PPP1R9A-208ENST00000456331 GNL2Q13823 731 aaKnown RBP5.03□□□□□ -1.6
PPP1R9A-208ENST00000456331 KDM2AQ9Y2K7 1162 aa5.03□□□□□ -1.6
PPP1R9A-208ENST00000456331 RTF1Q92541 710 aaKnown RBP5.02□□□□□ -1.61
PPP1R9A-208ENST00000456331 ST18O60284 1047 aa5.02□□□□□ -1.61
PPP1R9A-208ENST00000456331 SPAG9O60271 1321 aaKnown RBP5.02□□□□□ -1.61
PPP1R9A-208ENST00000456331 TPM3P06753 285 aa5.02□□□□□ -1.61
PPP1R9A-208ENST00000456331 NOC3LQ8WTT2 800 aaKnown RBP5.02□□□□□ -1.61
PPP1R9A-208ENST00000456331 MAP7D2Q96T17 732 aa5.02□□□□□ -1.61
PPP1R9A-208ENST00000456331 POGKQ9P215 609 aa5.02□□□□□ -1.61
PPP1R9A-208ENST00000456331 CDR1P51861 262 aa5.02□□□□□ -1.61
PPP1R9A-208ENST00000456331 TMX4Q9H1E5 349 aaPredicted RBP5.02□□□□□ -1.61
PPP1R9A-208ENST00000456331 SUPT16HQ9Y5B9 1047 aaKnown RBP5.02□□□□□ -1.61
PPP1R9A-208ENST00000456331 HDGFL2Q7Z4V5 671 aaPredicted RBP5.02□□□□□ -1.61
PPP1R9A-208ENST00000456331 VPS8Q8N3P4 1428 aa5.02□□□□□ -1.61
PPP1R9A-208ENST00000456331 TPM2P07951 284 aa5.02□□□□□ -1.61
PPP1R9A-208ENST00000456331 TPM1P09493 284 aa5.01□□□□□ -1.61
PPP1R9A-208ENST00000456331 AEBP2Q6ZN18 517 aaPredicted RBP5.01□□□□□ -1.61
PPP1R9A-208ENST00000456331 CHIC2Q9UKJ5 165 aa5.01□□□□□ -1.61
PPP1R9A-208ENST00000456331 SCAF1Q9H7N4 1312 aaKnown RBP5.01□□□□□ -1.61
PPP1R9A-208ENST00000456331 TSR1Q2NL82 804 aaKnown RBP5.01□□□□□ -1.61
PPP1R9A-208ENST00000456331 CEP89Q96ST8 783 aa5.01□□□□□ -1.61
PPP1R9A-208ENST00000456331 ROCK1Q13464 1354 aa5.01□□□□□ -1.61
PPP1R9A-208ENST00000456331 PDIA4P13667 645 aaKnown RBP5.01□□□□□ -1.61
PPP1R9A-208ENST00000456331 HOOK1Q9UJC3 728 aaKnown RBP5.01□□□□□ -1.61
PPP1R9A-208ENST00000456331 SALL2Q9Y467 1007 aaPredicted RBP5.01□□□□□ -1.61
PPP1R9A-208ENST00000456331 KIF16BQ96L93 1317 aa5.01□□□□□ -1.61
PPP1R9A-208ENST00000456331 ABCC8Q09428 1581 aa5□□□□□ -1.61
PPP1R9A-208ENST00000456331 PLCB2Q00722 1185 aa5□□□□□ -1.61
PPP1R9A-208ENST00000456331 NOM1Q5C9Z4 860 aaKnown RBP5□□□□□ -1.61
PPP1R9A-208ENST00000456331 TEX35Q5T0J7 233 aa5□□□□□ -1.61
PPP1R9A-208ENST00000456331 ACBD3Q9H3P7 528 aa5□□□□□ -1.61
PPP1R9A-208ENST00000456331 C14orf37Q86TY3 774 aa5□□□□□ -1.61
PPP1R9A-208ENST00000456331 CCDC18Q5T9S5 1454 aa4.99□□□□□ -1.61
PPP1R9A-208ENST00000456331 IL27Q8NEV9 243 aa4.99□□□□□ -1.61
PPP1R9A-208ENST00000456331 ANKRD30AQ9BXX3 1397 aa4.99□□□□□ -1.61
PPP1R9A-208ENST00000456331 IPO9Q96P70 1041 aaKnown RBP4.99□□□□□ -1.61
PPP1R9A-208ENST00000456331 ARXQ96QS3 562 aa4.99□□□□□ -1.61
PPP1R9A-208ENST00000456331 ISY1Q9ULR0 285 aaKnown RBP4.99□□□□□ -1.61
PPP1R9A-208ENST00000456331 SCAPERQ9BY12 1400 aa4.99□□□□□ -1.61
PPP1R9A-208ENST00000456331 HMGB2P26583 209 aaKnown RBP4.98□□□□□ -1.61
PPP1R9A-208ENST00000456331 TERF2IPQ9NYB0 399 aa4.98□□□□□ -1.61
PPP1R9A-208ENST00000456331 NPHP1O15259 732 aa4.98□□□□□ -1.61
PPP1R9A-208ENST00000456331 ANKRD20A12PQ8NF67 263 aa4.98□□□□□ -1.61
PPP1R9A-208ENST00000456331 MORC1Q86VD1 984 aa4.98□□□□□ -1.61
PPP1R9A-208ENST00000456331 CENPQQ7L2Z9 268 aaPredicted RBP4.98□□□□□ -1.61
PPP1R9A-208ENST00000456331 CCDC47Q96A33 483 aaKnown RBP4.98□□□□□ -1.61
PPP1R9A-208ENST00000456331 STK31Q9BXU1 1019 aa4.98□□□□□ -1.61
PPP1R9A-208ENST00000456331 RCAN3Q9UKA8 241 aa4.98□□□□□ -1.61
PPP1R9A-208ENST00000456331 CPLX2Q6PUV4 134 aaKnown RBP4.97□□□□□ -1.61
PPP1R9A-208ENST00000456331 KIF15Q9NS87 1388 aa4.97□□□□□ -1.61
PPP1R9A-208ENST00000456331 RRP7BPQ9NSQ0 103 aa4.97□□□□□ -1.61
PPP1R9A-208ENST00000456331 FRAT1Q92837 279 aaPredicted RBP4.97□□□□□ -1.61
PPP1R9A-208ENST00000456331 NLRP13Q86W25 1043 aa4.97□□□□□ -1.61
PPP1R9A-208ENST00000456331 CCP110O43303 1012 aa4.97□□□□□ -1.61
PPP1R9A-208ENST00000456331 IPO7O95373 1038 aaKnown RBP4.97□□□□□ -1.61
PPP1R9A-208ENST00000456331 RDXP35241 583 aaKnown RBP4.97□□□□□ -1.61
PPP1R9A-208ENST00000456331 MYO6Q9UM54 1294 aa4.97□□□□□ -1.61
PPP1R9A-208ENST00000456331 LETM1O95202 739 aaPredicted RBP4.97□□□□□ -1.61
PPP1R9A-208ENST00000456331 CAVIN1Q6NZI2 390 aaKnown RBP4.97□□□□□ -1.61
PPP1R9A-208ENST00000456331 ARGLU1Q9NWB6 273 aaPredicted RBP4.97□□□□□ -1.61
PPP1R9A-208ENST00000456331 CGNL1Q0VF96 1302 aa4.96□□□□□ -1.61
PPP1R9A-208ENST00000456331 DEKP35659 375 aaKnown RBP4.96□□□□□ -1.61
PPP1R9A-208ENST00000456331 ERCC4Q92889 916 aaPredicted RBP4.96□□□□□ -1.61
PPP1R9A-208ENST00000456331 GOLGA6L19H0YKK7 550 aa4.96□□□□□ -1.62
PPP1R9A-208ENST00000456331 SMC4Q9NTJ3 1288 aa4.96□□□□□ -1.62
PPP1R9A-208ENST00000456331 RUFY2Q8WXA3 655 aa4.96□□□□□ -1.62
PPP1R9A-208ENST00000456331 PDS5BQ9NTI5 1447 aa4.96□□□□□ -1.62
PPP1R9A-208ENST00000456331 REC8O95072 547 aa4.96□□□□□ -1.62
PPP1R9A-208ENST00000456331 RGS3P49796 1198 aa4.96□□□□□ -1.62
PPP1R9A-208ENST00000456331 TXLNBQ8N3L3 684 aa4.96□□□□□ -1.62
PPP1R9A-208ENST00000456331 CWC15Q9P013 229 aaKnown RBP4.96□□□□□ -1.62
PPP1R9A-208ENST00000456331 KIF7Q2M1P5 1343 aa4.96□□□□□ -1.62
PPP1R9A-208ENST00000456331 DCTN1Q14203 1278 aa4.95□□□□□ -1.62
PPP1R9A-208ENST00000456331 CARMIL1Q5VZK9 1371 aa4.95□□□□□ -1.62
PPP1R9A-208ENST00000456331 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.95□□□□□ -1.62
PPP1R9A-208ENST00000456331 RBM19Q9Y4C8 960 aaKnown RBP4.95□□□□□ -1.62
PPP1R9A-208ENST00000456331 HSP90AA2PQ14568 343 aaPredicted RBP4.95□□□□□ -1.62
PPP1R9A-208ENST00000456331 ARID3CA6NKF2 412 aa4.95□□□□□ -1.62
PPP1R9A-208ENST00000456331 U2SURPO15042 1029 aaKnown RBP4.95□□□□□ -1.62
PPP1R9A-208ENST00000456331 CAGE1Q8TC20 777 aa4.95□□□□□ -1.62
PPP1R9A-208ENST00000456331 CUX1P39880 1505 aa4.95□□□□□ -1.62
PPP1R9A-208ENST00000456331 AK7Q96M32 723 aa4.94□□□□□ -1.62
PPP1R9A-208ENST00000456331 ERCC6Q03468 1493 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms