RNA–Protein interactions for RNA: ENST00000456013.5

PTPN6-204, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 1 (best) BASIC

Gene PTPN6, Length 2,389 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-204ENST00000456013 CCDC7Q96M83 1385 aa24.5■■□□□ 1.51
PTPN6-204ENST00000456013 DNAJC5BQ9UF47 199 aa24.49■■□□□ 1.51
PTPN6-204ENST00000456013 TEX14Q8IWB6 1497 aa24.47■■□□□ 1.51
PTPN6-204ENST00000456013 ABCC5O15440 1437 aa24.47■■□□□ 1.51
PTPN6-204ENST00000456013 FOXD1Q16676 465 aa24.46■■□□□ 1.51
PTPN6-204ENST00000456013 C11orf95C9JLR9 678 aaPredicted RBP24.45■■□□□ 1.51
PTPN6-204ENST00000456013 KIAA0556O60303 1618 aa24.45■■□□□ 1.5
PTPN6-204ENST00000456013 ERICH6BQ5W0A0 696 aa24.45■■□□□ 1.5
PTPN6-204ENST00000456013 PRKRIP1Q9H875 184 aaPredicted RBP24.44■■□□□ 1.5
PTPN6-204ENST00000456013 MRC2Q9UBG0 1479 aa24.43■■□□□ 1.5
PTPN6-204ENST00000456013 ARID3CA6NKF2 412 aa24.42■■□□□ 1.5
PTPN6-204ENST00000456013 NBPF8Q3BBV2 869 aa24.42■■□□□ 1.5
PTPN6-204ENST00000456013 CCDC184Q52MB2 194 aa24.42■■□□□ 1.5
PTPN6-204ENST00000456013 DISP1Q96F81 1524 aa24.41■■□□□ 1.5
PTPN6-204ENST00000456013 SPATA31E1Q6ZUB1 1445 aa24.41■■□□□ 1.5
PTPN6-204ENST00000456013 RAPGEF6Q8TEU7 1601 aa24.41■■□□□ 1.5
PTPN6-204ENST00000456013 KIAA0586Q9BVV6 1533 aa24.41■■□□□ 1.5
PTPN6-204ENST00000456013 NUP153P49790 1475 aaKnown RBP24.4■■□□□ 1.5
PTPN6-204ENST00000456013 IRX6P78412 446 aaPredicted RBP24.36■■□□□ 1.49
PTPN6-204ENST00000456013 SLC4A1APQ9BWU0 796 aaKnown RBP24.35■■□□□ 1.49
PTPN6-204ENST00000456013 ZNF644Q9H582 1327 aaPredicted RBP24.35■■□□□ 1.49
PTPN6-204ENST00000456013 CDK11AQ9UQ88 783 aaPredicted RBP24.35■■□□□ 1.49
PTPN6-204ENST00000456013 IFT140Q96RY7 1462 aa24.34■■□□□ 1.49
PTPN6-204ENST00000456013 KIF7Q2M1P5 1343 aa24.34■■□□□ 1.49
PTPN6-204ENST00000456013 ADGBQ8N7X0 1667 aa24.33■■□□□ 1.49
PTPN6-204ENST00000456013 ZBED9Q6R2W3 1325 aa24.33■■□□□ 1.49
PTPN6-204ENST00000456013 MRS2Q9HD23 443 aa24.33■■□□□ 1.49
PTPN6-204ENST00000456013 PZPP20742 1482 aa24.32■■□□□ 1.48
PTPN6-204ENST00000456013 ITSN2Q9NZM3 1697 aa24.32■■□□□ 1.48
PTPN6-204ENST00000456013 PPP4R2Q9NY27 417 aa24.31■■□□□ 1.48
PTPN6-204ENST00000456013 ZNF608Q9ULD9 1512 aaPredicted RBP24.31■■□□□ 1.48
PTPN6-204ENST00000456013 FAM9BQ8IZU0 186 aa24.31■■□□□ 1.48
PTPN6-204ENST00000456013 FANCIQ9NVI1 1328 aa24.29■■□□□ 1.48
PTPN6-204ENST00000456013 CAMSAP2Q08AD1 1489 aa24.28■■□□□ 1.48
PTPN6-204ENST00000456013 TROQ12816 1431 aaPredicted RBP24.28■■□□□ 1.48
PTPN6-204ENST00000456013 MBD5Q9P267 1494 aa24.27■■□□□ 1.48
PTPN6-204ENST00000456013 GRIN2AQ12879 1464 aa24.27■■□□□ 1.48
PTPN6-204ENST00000456013 CROCC2H7BZ55 1655 aa24.26■■□□□ 1.47
PTPN6-204ENST00000456013 ADCY10Q96PN6 1610 aa24.25■■□□□ 1.47
PTPN6-204ENST00000456013 ADGRL2O95490 1459 aa24.25■■□□□ 1.47
PTPN6-204ENST00000456013 MSH5O43196 834 aa24.24■■□□□ 1.47
PTPN6-204ENST00000456013 PRG4Q92954 1404 aaPredicted RBP24.23■■□□□ 1.47
PTPN6-204ENST00000456013 KIAA1107Q9UPP5 1409 aa24.22■■□□□ 1.47
PTPN6-204ENST00000456013 KIF14Q15058 1648 aa24.21■■□□□ 1.47
PTPN6-204ENST00000456013 GPATCH8Q9UKJ3 1502 aaKnown RBP24.21■■□□□ 1.47
PTPN6-204ENST00000456013 CFDP1Q9UEE9 299 aaPredicted RBP24.2■■□□□ 1.46
PTPN6-204ENST00000456013 BCORL1Q5H9F3 1711 aa24.2■■□□□ 1.46
PTPN6-204ENST00000456013 EIF4G3O43432 1585 aaKnown RBP24.19■■□□□ 1.46
PTPN6-204ENST00000456013 DHX29Q7Z478 1369 aaKnown RBP24.19■■□□□ 1.46
PTPN6-204ENST00000456013 KDM5CP41229 1560 aa24.16■■□□□ 1.46
PTPN6-204ENST00000456013 USP47Q96K76 1375 aa24.15■■□□□ 1.46
PTPN6-204ENST00000456013 ARID4BQ4LE39 1312 aaPredicted RBP24.15■■□□□ 1.46
PTPN6-204ENST00000456013 ANKRD30AQ9BXX3 1397 aa24.13■■□□□ 1.45
PTPN6-204ENST00000456013 PLB1Q6P1J6 1458 aa24.13■■□□□ 1.45
PTPN6-204ENST00000456013 SMG6Q86US8 1419 aaKnown RBP24.12■■□□□ 1.45
PTPN6-204ENST00000456013 PKD2Q13563 968 aa24.11■■□□□ 1.45
PTPN6-204ENST00000456013 CEP170Q5SW79 1584 aa24.11■■□□□ 1.45
PTPN6-204ENST00000456013 UHRF1BP1Q6BDS2 1440 aa24.1■■□□□ 1.45
PTPN6-204ENST00000456013 MAGI1Q96QZ7 1491 aaPredicted RBP24.1■■□□□ 1.45
PTPN6-204ENST00000456013 ANKRD50Q9ULJ7 1429 aa24.09■■□□□ 1.45
PTPN6-204ENST00000456013 B4GALNT3Q6L9W6 998 aa24.09■■□□□ 1.45
PTPN6-204ENST00000456013 CDC42BPAQ5VT25 1732 aa24.07■■□□□ 1.44
PTPN6-204ENST00000456013 ZNF777Q9ULD5 760 aaPredicted RBP24.07■■□□□ 1.44
PTPN6-204ENST00000456013 RALGAPBQ86X10 1494 aa24.07■■□□□ 1.44
PTPN6-204ENST00000456013 SHANK2Q9UPX8 1470 aa24.06■■□□□ 1.44
PTPN6-204ENST00000456013 ROCK2O75116 1388 aaKnown RBP24.05■■□□□ 1.44
PTPN6-204ENST00000456013 ARHGEF12Q9NZN5 1544 aa24.04■■□□□ 1.44
PTPN6-204ENST00000456013 SYNJ2O15056 1496 aa24.04■■□□□ 1.44
PTPN6-204ENST00000456013 CARMIL2Q6F5E8 1435 aa24.04■■□□□ 1.44
PTPN6-204ENST00000456013 ZNF326Q5BKZ1 582 aaKnown RBP24.03■■□□□ 1.44
PTPN6-204ENST00000456013 KDM5DQ9BY66 1539 aa24.03■■□□□ 1.44
PTPN6-204ENST00000456013 NUDCQ9Y266 331 aa24.03■■□□□ 1.44
PTPN6-204ENST00000456013 RNF123Q5XPI4 1314 aa24.02■■□□□ 1.44
PTPN6-204ENST00000456013 ERICH6Q7L0X2 663 aa24■■□□□ 1.43
PTPN6-204ENST00000456013 ABCC10Q5T3U5 1492 aa24■■□□□ 1.43
PTPN6-204ENST00000456013 CHMP7Q8WUX9 453 aaPredicted RBP24■■□□□ 1.43
PTPN6-204ENST00000456013 POLR3GLQ9BT43 218 aa24■■□□□ 1.43
PTPN6-204ENST00000456013 C9orf84Q5VXU9 1444 aa23.99■■□□□ 1.43
PTPN6-204ENST00000456013 NUP155O75694 1391 aa23.98■■□□□ 1.43
PTPN6-204ENST00000456013 ABCA8O94911 1581 aa23.98■■□□□ 1.43
PTPN6-204ENST00000456013 NUP160Q12769 1436 aa23.97■■□□□ 1.43
PTPN6-204ENST00000456013 PNISRQ8TF01 805 aaKnown RBP23.96■■□□□ 1.43
PTPN6-204ENST00000456013 JPH4Q96JJ6 628 aa23.95■■□□□ 1.42
PTPN6-204ENST00000456013 KIF15Q9NS87 1388 aa23.94■■□□□ 1.42
PTPN6-204ENST00000456013 PLEKHD1A6NEE1 506 aa23.94■■□□□ 1.42
PTPN6-204ENST00000456013 CARD11Q9BXL7 1154 aa23.94■■□□□ 1.42
PTPN6-204ENST00000456013 PTPRGP23470 1445 aa23.93■■□□□ 1.42
PTPN6-204ENST00000456013 CNGB1Q14028 1251 aaPredicted RBP23.93■■□□□ 1.42
PTPN6-204ENST00000456013 E9PCH4 1651 aa23.93■■□□□ 1.42
PTPN6-204ENST00000456013 KTN1Q86UP2 1357 aaKnown RBP23.91■■□□□ 1.42
PTPN6-204ENST00000456013 ATP10BO94823 1461 aa23.91■■□□□ 1.42
PTPN6-204ENST00000456013 ARHGEF5Q12774 1597 aa23.91■■□□□ 1.42
PTPN6-204ENST00000456013 TMC1Q8TDI8 760 aa23.91■■□□□ 1.42
PTPN6-204ENST00000456013 BCL11AQ9H165 835 aa23.91■■□□□ 1.42
PTPN6-204ENST00000456013 LRPPRCP42704 1394 aaKnown RBP23.89■■□□□ 1.42
PTPN6-204ENST00000456013 TSPY4P0CV99 314 aa23.89■■□□□ 1.41
PTPN6-204ENST00000456013 TSPY10P0CW01 314 aa23.89■■□□□ 1.41
PTPN6-204ENST00000456013 BRD4O60885 1362 aaPredicted RBP23.88■■□□□ 1.41
PTPN6-204ENST00000456013 ST20-MTHFSA0A0A6YYL1 179 aa23.86■■□□□ 1.41
PTPN6-204ENST00000456013 FBLN2P98095 1184 aa23.86■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms